Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 9
- golgi 5
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g05850.t01 | Wine grape | plasma membrane | 72.7 | 70.88 |
| GSMUA_Achr3P20540_001 | Banana | cytosol, extracellular, nucleus | 12.74 | 70.0 |
| GSMUA_Achr7P23880_001 | Banana | plasma membrane | 70.45 | 68.68 |
| CDY24159 | Canola | golgi, mitochondrion | 67.67 | 67.45 |
| AT3G47730.1 | Thale cress | mitochondrion, plasma membrane | 70.77 | 67.24 |
| KRH54517 | Soybean | plasma membrane | 69.59 | 67.22 |
| CDY02116 | Canola | plasma membrane | 59.96 | 66.67 |
| CDY36933 | Canola | golgi, mitochondrion | 68.63 | 66.42 |
| Bra018116.1-P | Field mustard | golgi, mitochondrion | 69.91 | 66.23 |
| CDY64180 | Canola | plasma membrane | 44.22 | 65.87 |
| Os08t0398000-01 | Rice | plasma membrane | 68.2 | 65.81 |
| TraesCS1A01G342900.2 | Wheat | plasma membrane | 67.99 | 65.73 |
| TraesCS1B01G356100.2 | Wheat | plasma membrane | 67.77 | 65.66 |
| EES14950 | Sorghum | mitochondrion, plasma membrane, plastid | 67.56 | 65.66 |
| CDY62594 | Canola | cytosol | 32.12 | 65.65 |
| TraesCS1D01G345100.2 | Wheat | mitochondrion, plasma membrane, plastid | 67.67 | 65.49 |
| KRH63387 | Soybean | plasma membrane, plastid | 67.34 | 65.38 |
| AT5G61730.2 | Thale cress | plasma membrane, plastid | 66.17 | 65.05 |
| Zm00001d032279_P005 | Maize | golgi, plastid | 67.45 | 64.95 |
| HORVU1Hr1G075640.9 | Barley | golgi | 67.88 | 64.76 |
| AT5G61690.2 | Thale cress | plasma membrane | 66.06 | 64.74 |
| CDY23040 | Canola | plasma membrane | 65.63 | 64.26 |
| Bra012928.1-P | Field mustard | plasma membrane | 63.7 | 64.19 |
| CDY52820 | Canola | cytosol, nucleus, plasma membrane | 60.06 | 63.9 |
| PGSC0003DMT400083147 | Potato | plasma membrane | 64.56 | 63.61 |
| CDY23042 | Canola | plasma membrane | 63.17 | 62.97 |
| GSMUA_Achr3P20560_001 | Banana | plastid | 19.27 | 62.72 |
| CDY23800 | Canola | plasma membrane | 60.28 | 61.53 |
| CDX68434 | Canola | plasma membrane | 45.72 | 60.14 |
| CDX68435 | Canola | mitochondrion, plastid | 16.49 | 59.0 |
| CDY02118 | Canola | plasma membrane | 62.85 | 58.99 |
| CDY62596 | Canola | cytosol, plasma membrane, vacuole | 19.38 | 58.96 |
| Bra012930.1-P | Field mustard | plasma membrane | 56.42 | 58.04 |
| Solyc06g070960.1.1 | Tomato | plasma membrane | 57.17 | 57.67 |
| PGSC0003DMT400083070 | Potato | cytosol | 4.28 | 32.26 |
| PGSC0003DMT400083071 | Potato | plasma membrane | 22.7 | 22.67 |
| PGSC0003DMT400036875 | Potato | cytosol | 5.25 | 18.63 |
| PGSC0003DMT400074438 | Potato | extracellular | 5.46 | 18.21 |
Protein Annotations
| MapMan:24.1.3.2.1 | Gene3D:3.40.50.300 | MapMan:5.8.5 | InterPro:AAA+_ATPase | InterPro:ABCA | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | UniProt:M1BJI5 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF12698 | EnsemblPlantsGene:PGSC0003DMG402018143 | PGSC:PGSC0003DMG402018143 | EnsemblPlants:PGSC0003DMT400046727 |
| ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19229 | PANTHER:PTHR19229:SF193 | SMART:SM00382 | SUPFAM:SSF52540 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0002958523 | SEG:seg | : | : |
Description
ABC transporter A family member 2 [Source:PGSC_GENE;Acc:PGSC0003DMG402018143]
Coordinates
chr3:+:52920278..52927861
Molecular Weight (calculated)
103401.0 Da
IEP (calculated)
6.037
GRAVY (calculated)
0.116
Length
934 amino acids
Sequence
(BLAST)
(BLAST)
001: MATFLQLFAS LFFIFLLFLI QRAIEARFSS STSYKDVRDP QPLVSPPIPP CEDKNFITFP CYDFVWSGSQ SPKIGQIVNG IMANNPGRSI PSSKVLSFRT
101: RDEVDDWLFK NPMRCPGALH FVERNASVIS YGIQTNSTPV ASRGVFEDPT FTFQIPLQLA AEREIARSLI GDPNFSWVVS LKEFAHPAFE VFSALRTIGP
201: TFFLAVAMFG FVFQINALII EKELKLRQAM TMMGLYDTAY WLSWFTWEGF ITLLASLLTV LFGMMFQFDF FLNNNFAVVF LLFFLFQLNM VGFAYMVSAY
301: ISKSSSTTTV GFFIFIVGFM TQLVTTFGFP YSEDYSKIYR IIWSLFPPNL LAQGLQLLAD ATATPEDPGV SWSGRTKCAF NDTECVITMN EIYILLVSTF
401: FLWFVLAIYL DNTIPNISGV RKSAFYFLNP GYWTGKSGNK VKEGSVCSCI GSVPALDSII PDDEDVLEEE NIVKRQATQG EVDSNVAVQL HGLVKIFPGT
501: TKMGCCKCQR KSPFHAIKGL WVNLAKDQLF CLLGPNGAGK TTTINCLTGI TPVTAGDALV YGESIRSSAG MSNIRSMIGV CPQFDILWDA LSGQEHLHIF
601: ASIKGLPPGL IKEVVEKSLA EVKLTQAARM RAGSYSGGMK RRLSVAIALI GEPKLVILDE PTTGMDPITR RHVWDIIEDA KKGRAIILTT HSMEEADILS
701: DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NVSFSGGTNG TPDREDTLRT SQPEAVKQFF KSRLDVVPTE ENKSFLTFII PHAKEKLLTD FFAELQDRDK
801: EFGISDIQLG LTTLEEVFLN IARQAELEDV AEGSSATLTL NTGLSLQIPI GARFVKIPGT ESAENPIGTM VEVYWDQDDS GRLCISGHSP DMPIPAHVQL
901: RDPPTDTSSS GFLRKRKQIQ GTVIDPAQIT GASS
101: RDEVDDWLFK NPMRCPGALH FVERNASVIS YGIQTNSTPV ASRGVFEDPT FTFQIPLQLA AEREIARSLI GDPNFSWVVS LKEFAHPAFE VFSALRTIGP
201: TFFLAVAMFG FVFQINALII EKELKLRQAM TMMGLYDTAY WLSWFTWEGF ITLLASLLTV LFGMMFQFDF FLNNNFAVVF LLFFLFQLNM VGFAYMVSAY
301: ISKSSSTTTV GFFIFIVGFM TQLVTTFGFP YSEDYSKIYR IIWSLFPPNL LAQGLQLLAD ATATPEDPGV SWSGRTKCAF NDTECVITMN EIYILLVSTF
401: FLWFVLAIYL DNTIPNISGV RKSAFYFLNP GYWTGKSGNK VKEGSVCSCI GSVPALDSII PDDEDVLEEE NIVKRQATQG EVDSNVAVQL HGLVKIFPGT
501: TKMGCCKCQR KSPFHAIKGL WVNLAKDQLF CLLGPNGAGK TTTINCLTGI TPVTAGDALV YGESIRSSAG MSNIRSMIGV CPQFDILWDA LSGQEHLHIF
601: ASIKGLPPGL IKEVVEKSLA EVKLTQAARM RAGSYSGGMK RRLSVAIALI GEPKLVILDE PTTGMDPITR RHVWDIIEDA KKGRAIILTT HSMEEADILS
701: DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NVSFSGGTNG TPDREDTLRT SQPEAVKQFF KSRLDVVPTE ENKSFLTFII PHAKEKLLTD FFAELQDRDK
801: EFGISDIQLG LTTLEEVFLN IARQAELEDV AEGSSATLTL NTGLSLQIPI GARFVKIPGT ESAENPIGTM VEVYWDQDDS GRLCISGHSP DMPIPAHVQL
901: RDPPTDTSSS GFLRKRKQIQ GTVIDPAQIT GASS
001: MTLQRGLPLL LQQYTALFKK NLLLSWRSKR ATFLQLFASF FFILLIFCIQ AAMEKSFASS TALKTVTDPT ALISPPIPPC EDKFFVNLPC YDFVWSGNRS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS
Arabidopsis Description
ABCA2ATH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6R6]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.