Factsheet for GSMUA_Achr7P23880_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P20560_001	Banana	plastid	23.38	78.05
GSMUA_Achr3P20540_001	Banana	cytosol, extracellular, nucleus	13.57	76.47
Os08t0398000-01	Rice	plasma membrane	76.1	75.31
TraesCS1A01G342900.2	Wheat	plasma membrane	75.37	74.74
EES14950	Sorghum	mitochondrion, plasma membrane, plastid	74.95	74.71
TraesCS1B01G356100.2	Wheat	plasma membrane	75.05	74.59
TraesCS1D01G345100.2	Wheat	mitochondrion, plasma membrane, plastid	74.95	74.4
Zm00001d032279_P005	Maize	golgi, plastid	74.84	73.92
HORVU1Hr1G075640.9	Barley	golgi	74.32	72.73
VIT_17s0000g05850.t01	Wine grape	plasma membrane	71.29	71.29
PGSC0003DMT400046727	Potato	plasma membrane	68.68	70.45
KRH54517	Soybean	plasma membrane	68.06	67.42
CDY24159	Canola	golgi, mitochondrion	64.82	66.28
AT5G61730.2	Thale cress	plasma membrane, plastid	65.14	65.68
AT5G61690.2	Thale cress	plasma membrane	65.14	65.48
AT3G47730.1	Thale cress	mitochondrion, plasma membrane	66.91	65.21
CDY23040	Canola	plasma membrane	64.93	65.2
CDY64180	Canola	plasma membrane	42.59	65.07
CDY36933	Canola	golgi, mitochondrion	65.24	64.77
CDY02116	Canola	plasma membrane	56.78	64.76
CDX68435	Canola	mitochondrion, plastid	17.64	64.75
Bra012928.1-P	Field mustard	plasma membrane	62.63	64.72
CDY23042	Canola	plasma membrane	63.26	64.67
Bra018116.1-P	Field mustard	golgi, mitochondrion	66.39	64.5
KRH63387	Soybean	plasma membrane, plastid	64.51	64.24
CDY23800	Canola	plasma membrane	60.65	63.5
CDY62594	Canola	cytosol	29.85	62.58
CDY52820	Canola	cytosol, nucleus, plasma membrane	56.99	62.19
CDY62596	Canola	cytosol, plasma membrane, vacuole	19.83	61.89
CDY02118	Canola	plasma membrane	63.05	60.7
Bra012930.1-P	Field mustard	plasma membrane	56.37	59.47
Solyc06g070960.1.1	Tomato	plasma membrane	55.53	57.45
CDX68434	Canola	plasma membrane	41.75	56.34
GSMUA_AchrUn_...	Banana	cytosol	6.16	49.17
GSMUA_AchrUn_...	Banana	extracellular	8.14	23.15
GSMUA_Achr8P05670_001	Banana	plasma membrane	22.44	22.87
GSMUA_Achr1P08960_001	Banana	cytosol, mitochondrion, plastid	6.47	20.95
GSMUA_Achr7P23890_001	Banana	plasma membrane	24.74	20.26
GSMUA_Achr7P19550_001	Banana	endoplasmic reticulum, extracellular, vacuole	6.47	20.0
GSMUA_Achr1P13520_001	Banana	plastid	6.37	19.49
GSMUA_Achr3P20510_001	Banana	plasma membrane	23.8	19.44
GSMUA_AchrUn_...	Banana	mitochondrion	6.05	15.8
GSMUA_Achr3P20520_001	Banana	plasma membrane, plastid	9.71	15.17
GSMUA_AchrUn_...	Banana	extracellular, golgi, plasma membrane	5.22	4.41

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	MapMan:5.8.5	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr7G23880_001	EnsemblPlants:GSMUA_Achr7P23880_001
EnsemblPlants:GSMUA_Achr7T23880_001	InterPro:IPR003439	UniProt:M0TK74	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF193	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI000295AC80	SEG:seg	:	:	:

Description

ABC transporter A family member 2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G23880_001]

Coordinates

chr7:-:25929708..25937247

Molecular Weight (calculated)

106544.0 Da

IEP (calculated)

6.285

GRAVY (calculated)

-0.011

Length

958 amino acids

Sequence
(BLAST)

001: MELNSGVPLI TQQYAALLRK NFILTWRHKK SAFLQLFSSL FFIFLIFCID KAVKSRFSST TAYKNVHDPQ PLILPPIPPC EDKFYVKTPC HDFIWSGNAS
101: ARIATIVSAI MKNNPGREIP AEKVKSFGTQ AEVDAWLESN PMRCPGALHF VERNSTVISY GIQTNSTAVA KRGSYEDPTF KFQIPLQIAA EREISRSLIG
201: DPNFKWTVGF KEFAHPATET FSAVGTAGPT FFLAIAMFGF VFQISSLVTE KELKLRQAMS IMGLYDSAYW LSWFTWEAFL TVVAALFTVL FGMMFQFNFF
301: LHNSFAVLFL LFFLFQLNML SFAFMISAFV SKSSSANTVG FSIFIIGFLT QLVTVFGFPY DSNFTKLYRV IWSLFPPNLL AKALDLLGNE TATSEDEGIS
401: WGRRGECTTY EPDCTITIED IYKWLISTFF VWFILAIYFD NIIPNSNGVR KSMFYFLNPS YWTGNDGNRV EEGSLCSCSG SIPPLDDATP SDEDVLAEET
501: SVKQQAATNE VDPNVAVQIR GLTKTYPGTM KIGCCKCQRS SPYHAVKGIW VNLAKDQLFC LLGPNGAGKT TVINCLTGVT PVTAGDALIH GYSVRSSVGM
601: SNIRRMIGVC PQFDILWDEL SAQEHLHLFA SIKGLPPSTI KSVAEESLAE VKLTTAARVR SGNYSGGMKR RLSVAIALIG DPKMVFLDEP TTGMDPITRR
701: HVWDIIEDAK RGRAIVLTTH SMEEADILSD RIAIMAKGKL RCIGTSIRLK SRFGTGYVAN VSFPGNAPGQ TPNVYGSAPT SNPHLEPVKQ FFKDRLDVDP
801: KEENMTFLTF VIPHQKEGLL TDFFAELQDR EEEFGISDIQ LGLTTLEEVF LNIAKQAELE SSSMEENLVT LNLSSGPSIQ IPKGARFVGI PGTESSEHPR
901: GLMVEVYWEQ DDTGTLCISG HSSETDIPPN VQLTVNRAPS RRGSIREEHN EKWSTGAR

Best Arabidopsis Sequence Match ( AT3G47730.1 )
(BLAST)

001: MTLQRGLPLL LQQYTALFKK NLLLSWRSKR ATFLQLFASF FFILLIFCIQ AAMEKSFASS TALKTVTDPT ALISPPIPPC EDKFFVNLPC YDFVWSGNRS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS

Arabidopsis Description

ABCA2ATH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6R6]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.