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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY62594 Canola cytosol 50.12 92.12
CDY64180 Canola plasma membrane 67.38 90.27
Bra012928.1-P Field mustard plasma membrane 95.6 86.62
CDY52820 Canola cytosol, nucleus, plasma membrane 90.0 86.1
CDY23040 Canola plasma membrane 96.67 85.12
AT5G61730.2 Thale cress plasma membrane, plastid 84.64 74.84
CDY23042 Canola plasma membrane 80.48 72.15
CDY23800 Canola plasma membrane 77.86 71.48
GSMUA_Achr3P20540_001 Banana cytosol, extracellular, nucleus 14.29 70.59
CDY62596 Canola cytosol, plasma membrane, vacuole 25.0 68.4
CDY02118 Canola plasma membrane 80.12 67.64
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 28.57 65.75
CDY24159 Canola golgi, mitochondrion 73.33 65.74
CDX68434 Canola plasma membrane 55.0 65.07
CDY36933 Canola golgi, mitochondrion 74.64 64.97
PGSC0003DMT400046727 Potato plasma membrane 66.67 59.96
VIT_17s0000g05850.t01 Wine grape plasma membrane 68.1 59.71
GSMUA_Achr3P20560_001 Banana plastid 19.88 58.19
KRH54517 Soybean plasma membrane 65.48 56.88
GSMUA_Achr7P23880_001 Banana plasma membrane 64.76 56.78
TraesCS1B01G356100.2 Wheat plasma membrane 64.05 55.81
EES14950 Sorghum mitochondrion, plasma membrane, plastid 63.81 55.78
TraesCS1D01G345100.2 Wheat mitochondrion, plasma membrane, plastid 63.93 55.65
TraesCS1A01G342900.2 Wheat plasma membrane 63.93 55.59
KRH63387 Soybean plasma membrane, plastid 63.45 55.41
Zm00001d032279_P005 Maize golgi, plastid 63.57 55.05
Os08t0398000-01 Rice plasma membrane 63.33 54.96
HORVU1Hr1G075640.9 Barley golgi 63.93 54.85
Solyc06g070960.1.1 Tomato plasma membrane 55.24 50.11
CDX68435 Canola mitochondrion, plastid 11.9 38.31
CDX94927 Canola cytosol 4.17 29.41
CDY23043 Canola cytosol, mitochondrion 17.86 29.3
CDY02120 Canola cytosol, nucleus, plasma membrane 22.98 29.29
CDY31786 Canola cytosol, nucleus, plasma membrane 22.98 29.24
CDX68439 Canola nucleus 5.48 29.11
CDY58413 Canola cytosol, plastid 7.62 23.36
CDY24573 Canola plasma membrane 4.4 23.27
CDX69605 Canola plastid 7.5 22.99
CDY23798 Canola nucleus, peroxisome, plasma membrane 10.48 22.92
CDX77874 Canola plasma membrane 22.5 22.8
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 23.81 22.57
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 11.43 22.54
CDY21797 Canola plasma membrane 24.05 22.35
CDY62599 Canola plasma membrane 22.98 22.21
CDY36930 Canola plasma membrane 24.52 21.87
CDY02114 Canola plasma membrane 22.86 21.65
CDX68440 Canola cytosol, mitochondrion 3.57 21.58
CDY24157 Canola plastid 24.4 21.56
CDX83025 Canola plasma membrane 24.17 21.55
CDY24156 Canola plasma membrane 24.17 21.55
CDY23039 Canola plasma membrane 22.74 21.51
CDY24158 Canola plasma membrane 23.69 21.49
CDY36931 Canola plastid 23.81 21.48
CDX68441 Canola plasma membrane 23.81 21.23
CDY01873 Canola cytosol 6.67 21.21
CDY39546 Canola plasma membrane 23.57 21.18
CDX77421 Canola plasma membrane 23.45 21.07
CDX96058 Canola cytosol 6.55 20.83
CDY16404 Canola plastid 8.1 20.67
CDY57805 Canola plastid 7.98 20.36
CDX68436 Canola plasma membrane 5.71 16.33
CDY39288 Canola cytosol 3.45 14.65
CDY22536 Canola mitochondrion, plasma membrane 28.1 12.74
CDY35403 Canola mitochondrion, plasma membrane 27.86 12.58
CDY23799 Canola cytosol, peroxisome, plasma membrane 0.6 2.45
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 0.48 2.23
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300MapMan:5.8.5GO:A0A078ELQ5InterPro:AAA+_ATPaseInterPro:ABCA
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY02116ProteinID:CDY02116ProteinID:CDY02116.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00113508001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF12698ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF193SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EF1290SEG:seg::
Description
BnaA03g40510D
Coordinates
chrLK031932:+:222170..230097
Molecular Weight (calculated)
92894.3 Da
IEP (calculated)
8.199
GRAVY (calculated)
0.154
Length
840 amino acids
Sequence
(BLAST)
001: MACGYILFLV KSFKGPEEVD AWFTSHPLHA PGALHFTERN ATVISYGVQT NSSLATKRGR TEDPTFKFLV PLQIAAEREI ARFLIGDPKF GWSFGFKEFA
101: QPAVAKDITI SPLNLMGPVF FLAFSMFGFV LQLGSLATEK ELKLRQAMTV MGVYDTAYLL SWLIWEGILT FVSSLFLVLF GMMFQFDFFL KNSFFVVFLL
201: FLLFQFNMIS LAFMLSSFIS KSSSATTVGF LVFLISFITQ TVATSGFPYS STHSLSRRVI WSFFPPNTFS AGLQLLIEAT SVPGSPGISW SKRDVCSKMD
301: DTTCFLTMNK IYIWLVGTFF FWFVLAIYFE NIIPNASGVR KKIFYFLKPS YRTGKEGNKV EEGSICSCFG SVPPVEHLTS DDQDVLEEET LVKKQAMDGT
401: VDPNIAVQIH GLAKMYPGTT KLGCCKCTKT SPFHAVKGLW MNIAKDQLFC LLGPNGAGKT TTISCLTGIN PVTGGDALIY GDSIRSSVGM SNIRKMIGVC
501: PQFDILWDAL SSEEHLHLFA SIKGLPPASI KPIAEKLLAD VKLTGAAKIR AGSYSGGMKR RLSVAIALIG DPKLVFLDEP TTGMDPITRR HVWDIIQKSK
601: KGRAIILTTH SMEEADILGD RIGIMAKGRL RCIGTSIRLK SRFGTGFITT VSFLENKKDG SGTSPEPLKR FFKKHLKVEP IEEKKAFMTF VIPHDKEKLL
701: AGFFEELQYR ESEFGISDIQ LGLATLEEVF LNIARRAELE SATAEGTVVT LELESGILVE IPVGARFVGI PGTENAENPR GMMVEVYWQQ DGSGSMCISG
801: HSPEMCIPQN VSVLYEPPSQ VLGRGQRRVR GSVIAYESSD
Best Arabidopsis Sequence Match ( AT5G61730.2 )
(BLAST)
001: MTLREGLPLF HQQFTALFKK NLLLSWRNKR ATCLHLFSSF FFILLIFSIE ESSKASDLTS TRHKNVTDPK ALVSLPILPC EDKFFVRLPC FDFVWSGNQS
101: RRVTDIVSAI MANNPGRPIP TNKVQSFTKP EEVDAWFMSH PSQVTGALHF VEKNATVISY GIQTNSSSEK KRGRREDPTF KFLVPLQIAA EREIARSLIG
201: DPKFSWDFGF KEFARPAIGG EVIISAFYLM GPVFFLAFSM FGFVLQLGSV VTEKELKLRE AMTTMGVYES AYWLSWLIWE GILTFVSSLF LVLFGMMFQF
301: EFFLKNSFVL VFLLFFLFQF NMIGLAFALS SIISKSSSAT TVGFLVFLVG FITQIVTTAG FPYSSAYSIG SRVIWSLFPP NTFSAGLQLL LEATSSPGDS
401: GISWSERAIC AGGESTCVIT TNKIYIWLVG TFFFWFVLAL YFDNIIPNAS GVRKSIFYFL KPSYWTGKEG NKVEEGSICS CIGSVPPVEH ITPEDEDVLE
501: EEILVKQQAM DGRVDPNIAV QIHGLAKTYP GTTKLGCCKC TKTSPFHAVK GLWMNIAKDQ LFCLLGPNGA GKTTTISCLT GINPVTGGDA KIYGNSIRSS
601: VGMSNIRKMI GVCPQFDILW DALSSEEHLH LFASIKGLPP SSIKSIAEKL LVDVKLTGSA KIRAGSYSGG MKRRLSVAIA LIGDPKLVFL DEPTTGMDPI
701: TRRHVWDIIQ ESKKGRAIIL TTHSMEEADI LSDRIGIMAK GRLRCIGTSI RLKSRFGTGF VATVSFIENK KDGAPEPLKR FFKERLKVEP TEENKAFMTF
801: VIPHDKEQLL KGFFAELQDR ESEFGIADIQ LGLATLEEVF LNIARRAELE SATVEGTMVT LELESGIAVE IPVGARFVGI PGTENAENPR GLMVEVYWQQ
901: DGSGSMCISG HSAEMRIPEN VSVIYEPSSQ VLGHGQRRVR GIVIDYESNN
Arabidopsis Description
ABCA9ABC transporter A family member 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLT5]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.