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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY24573 Canola plasma membrane 17.85 93.08
Bra019513.1-P Field mustard plasma membrane 94.09 87.35
CDY21797 Canola plasma membrane 94.21 86.39
AT3G47790.1 Thale cress plasma membrane 85.89 79.02
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 37.76 63.75
KRH54520 Soybean plasma membrane, plastid 57.06 58.61
CDY36930 Canola plasma membrane 65.86 57.96
CDY24156 Canola plasma membrane 65.74 57.86
CDY02120 Canola cytosol, nucleus, plasma membrane 45.72 57.51
CDY31786 Canola cytosol, nucleus, plasma membrane 45.48 57.12
CDY23798 Canola nucleus, peroxisome, plasma membrane 26.3 56.77
Solyc03g113040.2.1 Tomato plastid 64.29 56.4
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 59.95 56.09
CDY24158 Canola plasma membrane 62.36 55.83
CDX83025 Canola plasma membrane 63.21 55.63
CDX77421 Canola plasma membrane 62.61 55.51
CDY39546 Canola plasma membrane 62.24 55.19
CDX68441 Canola plasma membrane 62.24 54.78
Solyc03g113060.2.1 Tomato extracellular 62.24 54.66
KRH56933 Soybean plasma membrane, plastid 61.52 53.74
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 41.25 53.6
KRH63384 Soybean plasma membrane 47.04 53.57
KRH03450 Soybean plasma membrane, plastid 61.04 53.04
CDY36931 Canola plastid 59.47 52.95
CDY24157 Canola plastid 60.55 52.79
CDY62599 Canola plasma membrane 54.89 52.36
CDY02114 Canola plasma membrane 54.4 50.85
TraesCS7A01G367700.1 Wheat plasma membrane 34.74 50.7
CDY23039 Canola plasma membrane 54.16 50.56
KXG25097 Sorghum plasma membrane 57.66 49.9
Os08t0398300-01 Rice plasma membrane 56.94 49.32
TraesCS1A01G343000.1 Wheat plasma membrane 56.57 49.21
TraesCS1D01G345200.1 Wheat plasma membrane 56.45 49.16
TraesCS1B01G356200.1 Wheat plasma membrane 55.61 48.42
Zm00001d050259_P002 Maize plasma membrane 57.42 48.37
HORVU1Hr1G075620.5 Barley plasma membrane 55.61 48.32
TraesCS5A01G193200.1 Wheat plasma membrane 54.89 48.1
TraesCS5D01G195700.1 Wheat plasma membrane 54.89 48.1
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 24.61 47.89
Zm00001d020208_P003 Maize plasma membrane 54.64 47.78
OQU89360 Sorghum plasma membrane 54.64 47.78
HORVU4Hr1G087670.8 Barley mitochondrion 54.89 47.4
TraesCS5B01G188600.1 Wheat plasma membrane 53.8 46.95
TraesCS7D01G355100.1 Wheat plastid 53.92 46.81
Solyc06g070950.1.1 Tomato plasma membrane 50.3 46.8
TraesCS4B01G365000.1 Wheat plasma membrane 55.49 46.75
TraesCS7B01G260800.1 Wheat plastid 53.8 46.65
Os06t0589300-01 Rice plasma membrane 53.2 46.47
HORVU5Hr1G056930.20 Barley plasma membrane 54.76 46.47
CDY23043 Canola cytosol, mitochondrion 28.59 46.29
TraesCS3D01G368700.2 Wheat plasma membrane 53.92 46.18
TraesCSU01G138200.1 Wheat plasma membrane 55.37 45.99
CDX68439 Canola nucleus 8.69 45.57
EER89983 Sorghum plastid 52.35 45.49
TraesCS5A01G534100.3 Wheat cytosol 55.13 45.25
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 54.04 45.21
Zm00001d036927_P001 Maize plasma membrane, plastid 52.23 44.87
GSMUA_Achr7P23890_001 Banana plasma membrane 59.71 42.31
GSMUA_Achr3P20510_001 Banana plasma membrane 57.06 40.32
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 8.08 39.88
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 7.96 39.29
HORVU4Hr1G039510.1 Barley cytosol 7.6 37.5
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 7.96 36.87
Solyc06g070930.2.1 Tomato plastid 12.18 36.86
CDY23799 Canola cytosol, peroxisome, plasma membrane 7.84 31.86
CDX94927 Canola cytosol 3.5 24.37
CDY24159 Canola golgi, mitochondrion 26.42 23.37
CDY58413 Canola cytosol, plastid 7.6 22.99
CDX69605 Canola plastid 7.6 22.99
CDY23040 Canola plasma membrane 26.3 22.85
CDY23800 Canola plasma membrane 25.21 22.84
CDX68436 Canola plasma membrane 8.08 22.79
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 10.01 22.74
CDY64180 Canola plasma membrane 17.13 22.65
CDY36933 Canola golgi, mitochondrion 26.3 22.59
CDY23042 Canola plasma membrane 25.45 22.52
CDY02116 Canola plasma membrane 22.8 22.5
CDY52820 Canola cytosol, nucleus, plasma membrane 23.52 22.21
CDY62594 Canola cytosol 12.18 22.1
CDY62596 Canola cytosol, plasma membrane, vacuole 8.08 21.82
CDX68435 Canola mitochondrion, plastid 6.76 21.46
CDY02118 Canola plasma membrane 25.57 21.31
CDX96058 Canola cytosol 6.76 21.21
CDY01873 Canola cytosol 6.76 21.21
CDY16404 Canola plastid 8.32 20.97
CDY57805 Canola plastid 8.08 20.36
CDX68434 Canola plasma membrane 17.01 19.86
CDX68440 Canola cytosol, mitochondrion 3.26 19.42
CDY39288 Canola cytosol 3.74 15.66
CDY35403 Canola mitochondrion, plasma membrane 20.75 9.25
CDY22536 Canola mitochondrion, plasma membrane 20.39 9.12
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078CP64InterPro:AAA+_ATPaseInterPro:ABCAInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDX77874ProteinID:CDX77874ProteinID:CDX77874.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00129061001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF12698
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EEE825SEG:seg:::
Description
BnaC03g53450D
Coordinates
chrLK031813:+:1327079..1331146
Molecular Weight (calculated)
94281.9 Da
IEP (calculated)
8.991
GRAVY (calculated)
0.008
Length
829 amino acids
Sequence
(BLAST)
001: MTDSRPASIL TQADALLRKN LVFQKRNIWS NVRLVTIPFF LCLLLVVIQL LFDSQFNEDH GQCGCLNEKT CGLRYSTSDQ AAFCVIPNPS QWTPLLQIPS
101: PQYRATTTLY LSHSSPVTFL FTGNNQSLGE TLMRNMYSNS PEFGGDLANY VLGSSSLPAY TNYMDSSFIS DLPIYNIKHK CSPNSSFSIL IHQPPLSFPK
201: EITCVRGLNL WRNSTFDVNK ELFKGYRKGN QEEKINEYTA AFDFQNTNGN RLNVNVWYNS TYKNNTVIRP MALIRVPRLV NLASNAYLEF LKGSQTKILF
301: EYIKEMPKPE TKLTLDITSL IGPLFFTWVI LLLFPVILTT LVYEKQQRLR IMMKMHGLGD APYWIVSYTY FVLVSILYML CFAVFGSAIG LNFFRLNDYS
401: IQLVFFLISI NLQISVAFLV SAMFSDVKTA TVIAYIYVFG TGLLGIFLFQ FFLEDPHFPR EWIIAMELYP GFSLYRGLYE LSQSAFAADY RGVNGMRWRD
501: LGDGMKEVTC IMLIEWLLLL VSAFYIDQIT YSSKHPLFFF LQTPSKKKQH HYSNKQISKF VVEMEKPDVC QEREKVEQYL LESTENCAVL CNNLKKVYSG
601: KDGNPQKLAV RGLSLALPQG ECFGMLGPNG AGKTSFINMM TGIIKPSSGS AFVQGLDILT DMDRIYTTTG VCPQHDLLWD KLSGREHLLF YGRLKNLQGS
701: VLTQAVEESL RSVNLFHGGN GDKQIRRYSG GMKRRLSVAI SLIGNPKVVY MDEPSTGLDP ASRKSLWDVV KRAKRKGAII LTTHSMEEAE VLCDRLGIFV
801: NGSLQCIGNP KEVKLKQYMF YLYIRVFCK
Best Arabidopsis Sequence Match ( AT3G47790.1 )
(BLAST)
001: MADSSPASFL TQADALLRKN LVFQKRNIWS NIRLITIPFF LCLLLLVIQM LFDTQFNDVH GQCGCNEKTC GLRYSTSEQA AFCAIPNPPQ WTPLLQIPAP
101: EYRAAIPYPS HTSPATFLFT GNNQSLGNIL MGNMYSNSSG FDGDLAYYVL GSSSFPAYTN HMDSAFISDL PIYNIQHECS PNSSFSILIH QSPLAFPKEV
201: NCVQGLNLWR NSSSDVNNEL FKGYRKGNPD KKINEFAGAF DFQNTNGNNL NVSVWYNSTY KNDTVVRPMA LIRVPRLVNL ASNAYLEFLK GSETKILFEY
301: VKEMPKPETK LSLDIASLIG PLFFTWVILL LFPVILTTLV YEKQQRLRIM MKMHGLGDVP YWIVSYTYFL LISILYMLCF AIFGSLIGLN FFRLNDYSIQ
401: LVFFFICINL QISVAFLASA MFSDVKTATV IAYIYVFGTG LLGIFLFQFF LEDPLFPRGW IIAMELYPGF SLYRGLYELS QSAFAGDYRG IDGMKWRDFG
501: NGMKEVTCIM LIEWLLLLGL AYYIDQIIYS RKHPLFFLLQ STSKKKQHFS DNKISKVVVE MEKPDVCRER EKVEQCLLKS TRDSAVLCNN LKKVYSGKDG
601: NPQKLAVRGL SLALPQGECF GMLGPNGAGK TSFINMMTGI IKPSSGTAFV QGLDILTDMD RIYTTIGVCP QHDLLWEKLS GREHLLFYGR LKNLKGSVLT
701: QAVEESLRSV NLFHGGIGDK QVSKYSGGMK RRLSVAISLI GSPKVVYMDE PSTGLDPASR KSLWDVVKRA KRKGAIILTT HSMEEAEILC DRIGIFVDGS
801: LQCIGNPKEL KSRYGGSYVL TVTTSEEHEK EVEQLVHNIS TNAKKIYRTA GTQKFELPKQ EVKIGEVFKA LEKAKTMFPV VAWGLADTTL EDVFIKVAQT
901: S
Arabidopsis Description
ABCA8ABC transporter A family member 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.