Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • plastid 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY02120 Canola cytosol, nucleus, plasma membrane 98.48 98.63
CDY23798 Canola nucleus, peroxisome, plasma membrane 50.61 86.98
CDX94927 Canola cytosol 14.55 80.67
CDY23043 Canola cytosol, mitochondrion 61.06 78.71
CDY62599 Canola plasma membrane 97.42 73.99
AT5G61700.1 Thale cress plasma membrane 88.48 63.69
CDX68440 Canola cytosol, mitochondrion 12.58 59.71
CDY02114 Canola plasma membrane 77.12 57.38
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 55.15 57.05
CDY23039 Canola plasma membrane 76.67 56.98
KRH54520 Soybean plasma membrane, plastid 68.94 56.38
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 72.88 54.29
CDY36930 Canola plasma membrane 75.76 53.08
CDY24156 Canola plasma membrane 75.15 52.65
CDX83025 Canola plasma membrane 74.85 52.44
TraesCS7A01G367700.1 Wheat plasma membrane 45.0 52.29
CDY24158 Canola plasma membrane 73.33 52.27
CDX68441 Canola plasma membrane 73.94 51.8
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 38.48 51.73
CDY24573 Canola plasma membrane 12.27 50.94
CDY36931 Canola plastid 69.85 49.52
CDX77421 Canola plasma membrane 69.55 49.09
CDY39546 Canola plasma membrane 69.39 48.98
CDY24157 Canola plastid 70.0 48.58
Solyc03g113040.2.1 Tomato plastid 68.48 47.83
CDX68439 Canola nucleus 11.36 47.47
Solyc03g113060.2.1 Tomato extracellular 67.42 47.14
CDY21797 Canola plasma membrane 64.09 46.79
KRH56933 Soybean plasma membrane, plastid 66.52 46.26
KRH03450 Soybean plasma membrane, plastid 66.21 45.81
CDX77874 Canola plasma membrane 57.12 45.48
KRH63384 Soybean plasma membrane 49.85 45.19
Solyc06g070950.1.1 Tomato plasma membrane 59.55 44.11
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 28.03 43.43
TraesCS1D01G345200.1 Wheat plasma membrane 62.42 43.28
TraesCS1B01G356200.1 Wheat plasma membrane 62.42 43.28
TraesCS1A01G343000.1 Wheat plasma membrane 62.27 43.13
KXG25097 Sorghum plasma membrane 62.58 43.11
Os08t0398300-01 Rice plasma membrane 62.12 42.84
HORVU1Hr1G075620.5 Barley plasma membrane 61.52 42.56
HORVU4Hr1G087670.8 Barley mitochondrion 61.82 42.5
Zm00001d050259_P002 Maize plasma membrane 62.88 42.17
TraesCS5A01G193200.1 Wheat plasma membrane 59.09 41.23
TraesCS5D01G195700.1 Wheat plasma membrane 59.09 41.23
OQU89360 Sorghum plasma membrane 58.64 40.82
TraesCS4B01G365000.1 Wheat plasma membrane 60.61 40.65
TraesCS5B01G188600.1 Wheat plasma membrane 58.48 40.63
Zm00001d020208_P003 Maize plasma membrane 58.33 40.61
TraesCSU01G138200.1 Wheat plasma membrane 60.15 39.78
HORVU5Hr1G056930.20 Barley plasma membrane 58.79 39.71
TraesCS3D01G368700.2 Wheat plasma membrane 58.18 39.67
TraesCS5A01G534100.3 Wheat cytosol 60.3 39.41
EER89983 Sorghum plastid 56.67 39.2
Os06t0589300-01 Rice plasma membrane 56.21 39.09
TraesCS7D01G355100.1 Wheat plastid 56.52 39.06
TraesCS7B01G260800.1 Wheat plastid 56.52 39.02
Zm00001d036927_P001 Maize plasma membrane, plastid 56.52 38.65
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 56.36 37.54
GSMUA_Achr7P23890_001 Banana plasma membrane 66.52 37.52
GSMUA_Achr3P20510_001 Banana plasma membrane 64.7 36.4
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 7.88 30.95
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 7.58 29.76
HORVU4Hr1G039510.1 Barley cytosol 7.58 29.76
CDY64180 Canola plasma membrane 22.88 24.08
CDY62594 Canola cytosol 16.67 24.07
CDY16404 Canola plastid 11.67 23.4
CDY58413 Canola cytosol, plastid 9.55 22.99
CDX69605 Canola plastid 9.55 22.99
CDY02116 Canola plasma membrane 29.24 22.98
CDY57805 Canola plastid 11.36 22.8
CDX96058 Canola cytosol 9.09 22.73
CDY01873 Canola cytosol 9.09 22.73
CDY24159 Canola golgi, mitochondrion 30.76 21.66
CDY52820 Canola cytosol, nucleus, plasma membrane 28.03 21.07
CDY36933 Canola golgi, mitochondrion 30.76 21.04
CDX68434 Canola plasma membrane 22.58 20.99
CDY23800 Canola plasma membrane 28.79 20.77
CDY23040 Canola plasma membrane 29.7 20.55
CDY23042 Canola plasma membrane 29.09 20.49
CDY02118 Canola plasma membrane 29.09 19.3
CDX68436 Canola plasma membrane 6.97 15.65
CDX68435 Canola mitochondrion, plastid 5.91 14.94
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 8.18 14.79
CDY39288 Canola cytosol 4.39 14.65
CDY62596 Canola cytosol, plasma membrane, vacuole 6.52 14.01
Solyc06g070930.2.1 Tomato plastid 4.24 10.22
CDY22536 Canola mitochondrion, plasma membrane 26.21 9.34
CDY35403 Canola mitochondrion, plasma membrane 26.21 9.3
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 2.42 8.94
CDY23799 Canola cytosol, peroxisome, plasma membrane 2.42 7.84
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078H1Y2UniProt:A0A078H1Y2InterPro:AAA+_ATPaseInterPro:ABCA
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY31786ProteinID:CDY31786ProteinID:CDY31786.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00050456001InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EDC41ASEG:seg::
Description
BnaC01g27420DBnaC01g27420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1Y2]
Coordinates
chrLK032279:-:236145..239412
Molecular Weight (calculated)
73901.5 Da
IEP (calculated)
9.235
GRAVY (calculated)
-0.030
Length
660 amino acids
Sequence
(BLAST)
001: MATLSRKNSD RNNSADVNNE LFKGSYRGNP AGITNEIAAA YDLMNTDKKN FNVTIWYNST YKDEFSTGPV KLVRVPRSIN QISNAYLKFL KGPGLRILFE
101: FVKEVPKHAT RFNTDIASLL GPLFFTWVVL LLFPVILTSL VYEKQERLRI IMKMHGLGDG LKYFRLNSYS IQFVFYFIYL NLQIAIGFLV SSIFSKVKTV
201: TVVAYILVYG TGLLGSFLFQ TMLENQSFPE EWIVALELYP GFSLYRGLYE FSQYASRGNG MKWQDLSDSG MGEVLCIMSI EWFLALIIAF YIDQVFSSGK
301: HPFFFLNPFK KSSSIPSKPT VQRVDSKKVS IDMGKIDVSQ EREKVQQLRN EGSAGHAILC DNLKRVYPGE CFGMLGPNGA GKTSFISMMT GLLKPSSGTA
401: LVQGLDICKE MNKVYTSMGV CPQHDLLWET LTGREHLLFY GRLKNIKGSA LTQAVEESLK SVSLFDGGVG DKPAGNYSGG MKKRLSVAIS LIGNPKVVYL
501: DEPSTGLDPA SRKNLWDVIQ RAKQNTAIIL TTHSMEEAEF LCDRLGIFVD GALQCIGNSK ELKSRYGGSY VFTMTTSLEH EEDVERLVST VSPNVKKVYH
601: LAGRQKFELP KQEVRIAEVF WAVEKAKSNF TVFAWGLADT TLEDVFIKVA KSAQAFISLS
Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)
001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS
Arabidopsis Description
ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.