Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G043820.1 | Barley | cytosol, endoplasmic reticulum, plasma membrane | 86.9 | 86.9 |
| HORVU4Hr1G039510.1 | Barley | cytosol | 83.33 | 83.33 |
| TraesCS7A01G367700.1 | Wheat | plasma membrane | 82.14 | 24.3 |
| VIT_12s0055g00730.t01 | Wine grape | extracellular | 16.07 | 21.26 |
| CDX68438 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 38.69 | 15.26 |
| KRG88422 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 44.05 | 15.07 |
| CDY23798 | Canola | nucleus, peroxisome, plasma membrane | 33.93 | 14.84 |
| TraesCS7D01G355100.1 | Wheat | plastid | 80.95 | 14.24 |
| TraesCS7B01G260800.1 | Wheat | plastid | 80.95 | 14.23 |
| HORVU7Hr1G085680.2 | Barley | endoplasmic reticulum, peroxisome, plastid | 81.55 | 13.82 |
| EER89983 | Sorghum | plastid | 71.43 | 12.58 |
| Zm00001d036927_P001 | Maize | plasma membrane, plastid | 70.24 | 12.23 |
| Os06t0589300-01 | Rice | plasma membrane | 67.86 | 12.01 |
| CDY23043 | Canola | cytosol, mitochondrion | 35.71 | 11.72 |
| Solyc06g070920.2.1 | Tomato | extracellular, plasma membrane | 44.05 | 11.6 |
| Bra033786.1-P | Field mustard | cytosol, mitochondrion, nucleus | 19.05 | 10.74 |
| Bra018114.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 35.12 | 9.38 |
| Bra012927.1-P | Field mustard | cytosol | 33.93 | 9.27 |
| KRH54520 | Soybean | plasma membrane, plastid | 44.05 | 9.17 |
| VIT_18s0041g02240.t01 | Wine grape | plasma membrane | 37.5 | 8.56 |
| CDX77874 | Canola | plasma membrane | 39.88 | 8.08 |
| PGSC0003DMT400083071 | Potato | plasma membrane | 44.05 | 7.91 |
| VIT_17s0000g05860.t01 | Wine grape | plasma membrane, plastid | 44.64 | 7.9 |
| Solyc03g113060.2.1 | Tomato | extracellular | 43.45 | 7.73 |
| CDY36932 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 40.48 | 7.67 |
| AT3G47770.2 | Thale cress | endoplasmic reticulum, golgi, plasma membrane, plastid | 42.26 | 7.67 |
| CDX68441 | Canola | plasma membrane | 42.86 | 7.64 |
| KRH56933 | Soybean | plasma membrane, plastid | 42.86 | 7.59 |
| CDY31786 | Canola | cytosol, nucleus, plasma membrane | 29.76 | 7.58 |
| HORVU1Hr1G075620.5 | Barley | plasma membrane | 42.86 | 7.55 |
| Solyc03g113040.2.1 | Tomato | plastid | 42.26 | 7.51 |
| Bra015049.1-P | Field mustard | plasma membrane | 39.88 | 7.5 |
| CDX77421 | Canola | plasma membrane | 41.67 | 7.49 |
| CDY02120 | Canola | cytosol, nucleus, plasma membrane | 29.17 | 7.44 |
| CDX83025 | Canola | plasma membrane | 41.67 | 7.43 |
| CDY36930 | Canola | plasma membrane | 41.67 | 7.43 |
| Bra018113.1-P | Field mustard | plasma membrane | 41.67 | 7.43 |
| Bra033785.1-P | Field mustard | plasma membrane | 41.67 | 7.43 |
| Bra019513.1-P | Field mustard | plasma membrane | 39.29 | 7.39 |
| CDY39546 | Canola | plasma membrane | 41.07 | 7.38 |
| AT3G47780.1 | Thale cress | plasma membrane | 41.07 | 7.38 |
| Bra018115.1-P | Field mustard | plasma membrane | 40.48 | 7.34 |
| CDY21797 | Canola | plasma membrane | 39.29 | 7.3 |
| Solyc06g070950.1.1 | Tomato | plasma membrane | 38.69 | 7.3 |
| HORVU4Hr1G087670.8 | Barley | mitochondrion | 41.67 | 7.29 |
| CDY24158 | Canola | plasma membrane | 39.88 | 7.24 |
| KRH03450 | Soybean | plasma membrane, plastid | 41.07 | 7.23 |
| CDY24156 | Canola | plasma membrane | 40.48 | 7.22 |
| AT3G47790.1 | Thale cress | plasma membrane | 38.69 | 7.21 |
| AT3G47750.1 | Thale cress | mitochondrion, plasma membrane | 39.88 | 7.15 |
| AT3G47740.1 | Thale cress | plasma membrane | 39.29 | 7.08 |
| HORVU5Hr1G056930.20 | Barley | plasma membrane | 41.07 | 7.06 |
| AT3G47760.3 | Thale cress | plasma membrane | 39.29 | 7.05 |
| HORVU1Hr1G075610.7 | Barley | extracellular, mitochondrion, plasma membrane | 38.69 | 7.04 |
| CDY02114 | Canola | plasma membrane | 36.9 | 6.99 |
| CDY23039 | Canola | plasma membrane | 35.71 | 6.76 |
| AT5G61740.1 | Thale cress | plasma membrane | 36.31 | 6.71 |
| HORVU6Hr1G038520.24 | Barley | endoplasmic reticulum, plasma membrane | 37.5 | 6.71 |
| CDY36931 | Canola | plastid | 36.9 | 6.66 |
| AT5G61700.1 | Thale cress | plasma membrane | 36.31 | 6.65 |
| CDY24157 | Canola | plastid | 36.31 | 6.41 |
| CDY62599 | Canola | plasma membrane | 30.36 | 5.87 |
| HORVU5Hr1G091750.1 | Barley | plastid | 11.31 | 4.91 |
| HORVU3Hr1G089880.8 | Barley | plastid | 7.74 | 4.78 |
| HORVU7Hr1G098490.2 | Barley | plastid | 7.14 | 4.11 |
| Bra012931.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 13.69 | 3.89 |
| HORVU4Hr1G079940.5 | Barley | cytosol | 7.14 | 3.85 |
| HORVU4Hr1G025760.12 | Barley | cytosol | 3.57 | 3.49 |
| HORVU1Hr1G075640.9 | Barley | golgi | 19.64 | 3.37 |
| CDX68439 | Canola | nucleus | 2.98 | 3.16 |
| CDX68440 | Canola | cytosol, mitochondrion | 0.6 | 0.72 |
| KRH63384 | Soybean | plasma membrane | 1.19 | 0.27 |
| CDX94927 | Canola | cytosol | 0.0 | 0.0 |
| Solyc06g070930.2.1 | Tomato | plastid | 0.0 | 0.0 |
| PGSC0003DMT400083070 | Potato | cytosol | 0.0 | 0.0 |
| VIT_07s0095g00600.t01 | Wine grape | extracellular | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A287KLT3 | InterPro:ABCA | InterPro:ABC_transporter-like | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:HORVU3Hr1G030470 | EnsemblPlants:HORVU3Hr1G030470.1 | InterPro:IPR003439 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PANTHER:PTHR19229 | PANTHER:PTHR19229:SF141 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI000B482CB0 |
Description
No Description!
Coordinates
chrchr3H:+:146862215..146872122
Molecular Weight (calculated)
18958.2 Da
IEP (calculated)
7.866
GRAVY (calculated)
0.143
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MRWSDLNDRT NGMRDVMIII IVEWLVLLPV AYYFDYAASV GNSCGLLSII KRLLRKNPTW RRITVNEVAN NDVHVEMEKL AIIIEVSYYI TVHHSCIQFK
101: FSPDICYYVV VCDDLKKVYH GKDGKPDKYA IQGLSLALPY GECLGILGPN GGGNSSFISM MIGFSKPT
101: FSPDICYYVV VCDDLKKVYH GKDGKPDKYA IQGLSLALPY GECLGILGPN GGGNSSFISM MIGFSKPT
001: MAKPVAASFL TQANALFKKN LTYQKRNIWS NVRLIVIPLY LCVVLVCIQA VFDSLVNNSV DNQCGCRCAD DDKNGDGKCE IKSCGLQYSS QNQAVFCAFP
101: NPPPLLPLLH IPPSVNRDSC QRTGSCPVTI LVTGNNQSLG TTLSENLLST SFTVNSSSDL FLRNLAYNVL STTSETDYTN YRDPGIYSDL PIFNIQPQCT
201: PATILSLSFR QPPLEFHKEV RCVQGLNLWR NNSLEVNDEI FKGFRKENHE EIINEVAAAY DLLNTDRNKF NVTIWYYTTY KGDLQDWRVK YVRVPRSVNM
301: VSNAYLQFLR GPGTKILFDF VKEMPKQETR LRMDMASLIG PIFFTWVILL LFPVILTSLV YEKQQRLRII MKMHGLGDAP YWMISYAYFL AISTLYIVCL
401: MIFGSAIGLK FFRFNDYTIQ FMFYFLYINL QISIAFLVSS AFSKAVTASV VAYIYVFGSG LLGAFLFQFL IESLSFPRRW IFVMELYPGF SLYRGLYEFS
501: QYAFQRNLNG RDGMKWKDFR GSAMDEVFTI IIVEWVVALV ATYYIDRVSS SSKDTFAFLK NPFKLSPTPQ MLSFQKERSD VSVEMEKLDV IQEKETVKQL
601: IFERSKNHGI VCDNLKKVYQ GRDGNPPKLA VCGLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPSSG SAFVQGLDIC KDMDKVYISM GVCPQHE
101: NPPPLLPLLH IPPSVNRDSC QRTGSCPVTI LVTGNNQSLG TTLSENLLST SFTVNSSSDL FLRNLAYNVL STTSETDYTN YRDPGIYSDL PIFNIQPQCT
201: PATILSLSFR QPPLEFHKEV RCVQGLNLWR NNSLEVNDEI FKGFRKENHE EIINEVAAAY DLLNTDRNKF NVTIWYYTTY KGDLQDWRVK YVRVPRSVNM
301: VSNAYLQFLR GPGTKILFDF VKEMPKQETR LRMDMASLIG PIFFTWVILL LFPVILTSLV YEKQQRLRII MKMHGLGDAP YWMISYAYFL AISTLYIVCL
401: MIFGSAIGLK FFRFNDYTIQ FMFYFLYINL QISIAFLVSS AFSKAVTASV VAYIYVFGSG LLGAFLFQFL IESLSFPRRW IFVMELYPGF SLYRGLYEFS
501: QYAFQRNLNG RDGMKWKDFR GSAMDEVFTI IIVEWVVALV ATYYIDRVSS SSKDTFAFLK NPFKLSPTPQ MLSFQKERSD VSVEMEKLDV IQEKETVKQL
601: IFERSKNHGI VCDNLKKVYQ GRDGNPPKLA VCGLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPSSG SAFVQGLDIC KDMDKVYISM GVCPQHE
Arabidopsis Description
ABCA6ABC transporter A family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.