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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • endoplasmic reticulum 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, golgi, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36931 Canola plastid 94.64 96.67
Bra018114.1-P Field mustard cytosol, peroxisome, plasma membrane 63.41 95.87
CDX94927 Canola cytosol 10.83 86.55
AT3G47760.3 Thale cress plasma membrane 76.45 77.67
AT3G47750.1 Thale cress mitochondrion, plasma membrane 76.34 77.48
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 71.29 76.52
CDY24158 Canola plasma membrane 74.13 76.13
CDY36930 Canola plasma membrane 73.19 73.89
CDY24156 Canola plasma membrane 72.77 73.46
CDX83025 Canola plasma membrane 71.82 72.51
CDX77421 Canola plasma membrane 71.19 72.41
CDY39546 Canola plasma membrane 70.77 71.98
CDX68441 Canola plasma membrane 70.77 71.44
CDY02120 Canola cytosol, nucleus, plasma membrane 49.21 71.02
CDY31786 Canola cytosol, nucleus, plasma membrane 48.58 70.0
CDX68440 Canola cytosol, mitochondrion 9.67 66.19
KRH54520 Soybean plasma membrane, plastid 55.63 65.55
CDY24573 Canola plasma membrane 10.62 63.52
CDY62599 Canola plasma membrane 57.41 62.83
CDY02114 Canola plasma membrane 58.46 62.68
CDY23043 Canola cytosol, mitochondrion 33.65 62.5
KRH63384 Soybean plasma membrane 47.74 62.36
CDY23039 Canola plasma membrane 58.04 62.16
Solyc03g113040.2.1 Tomato plastid 61.62 62.01
CDY21797 Canola plasma membrane 58.15 61.17
Solyc03g113060.2.1 Tomato extracellular 60.25 60.7
CDX77874 Canola plasma membrane 52.79 60.55
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 30.7 59.47
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 39.75 59.25
CDY23798 Canola nucleus, peroxisome, plasma membrane 23.76 58.85
TraesCS7A01G367700.1 Wheat plasma membrane 34.81 58.27
KRH56933 Soybean plasma membrane, plastid 58.15 58.27
KRH03450 Soybean plasma membrane, plastid 58.04 57.86
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 25.66 57.28
KXG25097 Sorghum plasma membrane 54.78 54.38
TraesCS1A01G343000.1 Wheat plasma membrane 53.42 53.31
TraesCS1D01G345200.1 Wheat plasma membrane 53.31 53.26
Os08t0398300-01 Rice plasma membrane 53.52 53.19
TraesCS1B01G356200.1 Wheat plasma membrane 53.0 52.94
HORVU4Hr1G087670.8 Barley mitochondrion 53.21 52.71
HORVU1Hr1G075620.5 Barley plasma membrane 52.26 52.1
TraesCS4B01G365000.1 Wheat plasma membrane 53.73 51.93
Zm00001d050259_P002 Maize plasma membrane 53.73 51.93
Zm00001d020208_P003 Maize plasma membrane 51.63 51.79
OQU89360 Sorghum plasma membrane 51.63 51.79
Solyc06g070950.1.1 Tomato plasma membrane 47.84 51.07
TraesCS5D01G195700.1 Wheat plasma membrane 50.79 51.06
TraesCS5A01G193200.1 Wheat plasma membrane 50.79 51.06
TraesCS7B01G260800.1 Wheat plastid 51.31 51.05
TraesCS7D01G355100.1 Wheat plastid 51.21 50.99
TraesCSU01G138200.1 Wheat plasma membrane 53.42 50.9
Os06t0589300-01 Rice plasma membrane 50.47 50.58
EER89983 Sorghum plastid 50.47 50.31
TraesCS5A01G534100.3 Wheat cytosol 53.42 50.3
Zm00001d036927_P001 Maize plasma membrane, plastid 50.68 49.95
TraesCS3D01G368700.2 Wheat plasma membrane 50.68 49.79
HORVU5Hr1G056930.20 Barley plasma membrane 51.1 49.74
TraesCS5B01G188600.1 Wheat plasma membrane 49.53 49.58
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 51.42 49.34
CDX68439 Canola nucleus 7.78 46.84
GSMUA_Achr7P23890_001 Banana plasma membrane 56.05 45.56
GSMUA_Achr3P20510_001 Banana plasma membrane 54.68 44.33
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 7.89 41.9
CDY23799 Canola cytosol, peroxisome, plasma membrane 7.89 36.76
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 6.41 36.31
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 6.41 36.31
Solyc06g070930.2.1 Tomato plastid 10.41 36.13
HORVU4Hr1G039510.1 Barley cytosol 6.2 35.12
CDY64180 Canola plasma membrane 16.82 25.52
CDY62594 Canola cytosol 12.09 25.16
CDY58413 Canola cytosol, plastid 7.05 24.45
CDX69605 Canola plastid 7.05 24.45
CDY02116 Canola plasma membrane 21.56 24.4
CDY24159 Canola golgi, mitochondrion 23.76 24.12
CDY23042 Canola plasma membrane 23.66 24.01
CDY23800 Canola plasma membrane 23.03 23.93
CDY23040 Canola plasma membrane 23.97 23.9
CDY36933 Canola golgi, mitochondrion 23.76 23.42
CDY52820 Canola cytosol, nucleus, plasma membrane 21.35 23.12
CDX96058 Canola cytosol 6.41 23.11
CDY01873 Canola cytosol 6.41 23.11
CDY16404 Canola plastid 7.89 22.8
CDX68436 Canola plasma membrane 7.05 22.79
CDY02118 Canola plasma membrane 23.76 22.71
CDY57805 Canola plastid 7.68 22.19
CDX68434 Canola plasma membrane 16.51 22.11
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 8.1 21.1
CDY62596 Canola cytosol, plasma membrane, vacuole 6.62 20.52
CDX68435 Canola mitochondrion, plastid 5.57 20.31
CDY39288 Canola cytosol 3.15 15.15
CDY35403 Canola mitochondrion, plasma membrane 18.93 9.68
CDY22536 Canola mitochondrion, plasma membrane 18.82 9.66
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078GG83UniProt:A0A078GG83InterPro:AAA+_ATPaseInterPro:ABCA
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY24157ProteinID:CDY24157ProteinID:CDY24157.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00024763001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF12698ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EE4A68SEG:seg::
Description
BnaC03g57200DBnaC03g57200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GG83]
Coordinates
chrLK032154:-:365070..369462
Molecular Weight (calculated)
107512.0 Da
IEP (calculated)
8.394
GRAVY (calculated)
-0.052
Length
951 amino acids
Sequence
(BLAST)
001: MATNPVPASF LTRANALFRK NLTFQKRNIW SNVRLIVIPL YLCVLLVGIQ ALFNTQFNNS VDNRCGCKCI DEKNGDGKCE RKSCGPEYSS PNQAFFCAFP
101: NPPPLPPLLH IPSSVLDSNS CTRNTRSCHV TILVTGNNHT LGATISRNLL PTYSTVNSSD DFLRNPAYNV LASSEILVVS IGTTSETGNT NYLDPGIHSN
201: LSIFNIQARC TPNTTLSSFP FQQPLHEFHK AEERCVQGLN LWRNNSMEVN NEIFEGYQKE NHEESIKEIV AAYDLLDTNR NNFNVTIWYN STYKFNIKDR
301: RVKLVQVPRS VNLVSNAYLH FLQGPETKML FEYVKEVPKL ESRLRLDIAS LIGPLFFTWV ILLLFPVILT SLVYEKQQRL RIIMKMHGLG DGPYWMISYV
401: YYLIISTLYI ISLMIFGSAI ELQFLAGLKF FVFNDYSFQF IFCFLYINLQ ISTAFLVSSA FSKVETASVV SYIHIFGSGL LGAFLFQFLL EDVSFPRHWI
501: FFMELYPGFS LYRGLYEFSI YAYQKNVTGR DGMKWKDFTN SAMDEVFYII IVEWFVALIA TYYIDQGSLS VKDSFSFFRK HFKQSLYPQK PRTSMQSSSV
601: TVEMEKLDVT QERDKVEKLM LEPSTSHAIV CDNLKKVYPR RDGNPPKMAV RGLSLAVASK ECFGMLGPNG AGKTSFINTM TGLAKPTSGA AFVQGLDICK
701: DMDKVYTSMG VCPQQDLLWE TLTGREHLLF YGRLKNLKGS ELNQVVEDSL KNVNLFNGGV ADKPAGKYSG GMKRRLSVAI SLIGSPKVVY MDEPSTGLDP
801: ASRMNLWTVI KRAKRHTAII LTTHSMEEAE FLCDRLGIFV DGRLQCIGNP KELKARYGGS YVFTMTTSSE HEQDVEMLVQ DLSPNAKKIY HIAGTQKFEI
901: PKVEVGISKV FEAVEKAKSS FTVFAWGLEN TTLEDVFIKV ARGAQDFNVL S
Best Arabidopsis Sequence Match ( AT3G47760.3 )
(BLAST)
001: MGNHVPAGFF TQANSLFRKN LTYQKRNIWS NVRLIVIPFY LCVLLVGIQV LFDTQVNNSA DNRCGCRCID KNGDGKCGQK SCGLQYSSQN QAFFCAFPNP
101: PPLLPLLHIP RPETRSSDRD RDSCRQTGSC PVTILLTGNN HSLGTTISRN LLSTSFAMNS SDLFLRNLAY NVLGTTSKAD YTNYLDPGIL SDLPIFNVQP
201: RCTPDTTTFS FPFRQSPLEF HKEVRCVEGL NLWRNNSIEI SNEIFKGYRQ GNLEEIINEV AAAYDLMDTD INNFNVTIWY NSTYKGDLRD RRVKYVRVPR
301: SVNLVSNAYL EFLQGSGTKM LFDFVKEMPK QETRLRLEMA SLIGPIFFTW VILLLFPVML TSLVYEKQQH LRIIMKMHGL GDGPYWMITY AYFLAISIVY
401: IICLMIFGSA IGLKFFRFND YSIQFIFYFL CINLQISIAF LVSSAFSKIE TASVAAYLYV FGSGLLGAFL FQFLLEGLSF PRSWIYIMEL YPGFSLYRGL
501: YEFSQYAFKR NLNGSGGMKW KDFNDSAMEE IFYIIIVEWF VALIAAYYTD KISSSGIDPF FFLKNQNPFK KSPSPYGLQR QVSAIAIEME KLDVAHERVK
601: VEQLMLETST GHAIVCDNLK KVYPCRDGNP QKMAVRGLSL AVPSGECFGM LGPNGAGKTS FINMMTGLMK PTSGAAFVHG LDICKDMDIV YTSIGVCPQH
701: DLLWETLTGR EHLLFYGRLK NLKGSDLDQA VEESLKSVNL FRGGVADKPA GKYSGGMKRR LSVAISLIGS PKVVYMDEPS TGLDPASRRS LWTAIKRAKN
801: HTAIILTTHS MEEAEFLCDR LGIFVDGRLQ CVGNPKELKA RYGGSYVLTM TTPSEHEKDV EMLVQDVSPN AKKIYHIAGT QKFEIPKEEV RISEVFQAVE
901: KAKDNFRVFA WGLADTTLED VFIKVARTAQ ASNVFS
Arabidopsis Description
ABCA5ABC transporter A family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.