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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:golgi
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY23800 Canola plasma membrane 91.14 93.33
CDY02118 Canola plasma membrane 98.4 92.66
Bra012930.1-P Field mustard plasma membrane 88.05 90.86
AT5G61690.2 Thale cress plasma membrane 88.9 87.41
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 32.12 82.47
CDY23040 Canola plasma membrane 82.6 81.13
CDY02116 Canola plasma membrane 72.15 80.48
CDY64180 Canola plasma membrane 52.51 78.47
CDY52820 Canola cytosol, nucleus, plasma membrane 73.0 77.9
CDY62596 Canola cytosol, plasma membrane, vacuole 25.51 77.85
CDY62594 Canola cytosol 37.14 76.15
CDY24159 Canola golgi, mitochondrion 71.83 71.83
CDY36933 Canola golgi, mitochondrion 73.11 70.98
CDX68435 Canola mitochondrion, plastid 19.64 70.5
GSMUA_Achr3P20540_001 Banana cytosol, extracellular, nucleus 12.06 66.47
VIT_17s0000g05850.t01 Wine grape plasma membrane 67.13 65.66
CDX68434 Canola plasma membrane 48.24 63.66
GSMUA_Achr7P23880_001 Banana plasma membrane 64.67 63.26
PGSC0003DMT400046727 Potato plasma membrane 62.97 63.17
KRH54517 Soybean plasma membrane 64.99 62.98
TraesCS1B01G356100.2 Wheat plasma membrane 63.61 61.83
EES14950 Sorghum mitochondrion, plasma membrane, plastid 63.39 61.81
TraesCS1A01G342900.2 Wheat plasma membrane 63.61 61.7
TraesCS1D01G345100.2 Wheat mitochondrion, plasma membrane, plastid 63.5 61.66
KRH63387 Soybean plasma membrane, plastid 62.97 61.33
Os08t0398000-01 Rice plasma membrane 63.18 61.16
Zm00001d032279_P005 Maize golgi, plastid 62.86 60.72
HORVU1Hr1G075640.9 Barley golgi 62.75 60.06
GSMUA_Achr3P20560_001 Banana plastid 17.82 58.19
Solyc06g070960.1.1 Tomato plasma membrane 56.03 56.7
CDX94927 Canola cytosol 3.95 31.09
CDY02120 Canola cytosol, nucleus, plasma membrane 20.7 29.44
CDY31786 Canola cytosol, nucleus, plasma membrane 20.49 29.09
CDX68439 Canola nucleus 4.8 28.48
CDY23043 Canola cytosol, mitochondrion 15.47 28.32
CDX77874 Canola plasma membrane 22.52 25.45
CDY24573 Canola plasma membrane 4.27 25.16
CDY21797 Canola plasma membrane 23.91 24.78
CDY62599 Canola plasma membrane 22.41 24.17
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 22.84 24.15
CDY02114 Canola plasma membrane 22.73 24.01
CDY23798 Canola nucleus, peroxisome, plasma membrane 9.82 23.96
CDY36930 Canola plasma membrane 24.01 23.89
CDY23039 Canola plasma membrane 22.63 23.87
CDX68440 Canola cytosol, mitochondrion 3.52 23.74
CDY36931 Canola plastid 23.59 23.74
CDY24157 Canola plastid 24.01 23.66
CDY24156 Canola plasma membrane 23.69 23.57
CDX83025 Canola plasma membrane 23.69 23.57
CDY24158 Canola plasma membrane 23.05 23.33
CDY39546 Canola plasma membrane 23.16 23.21
CDX77421 Canola plasma membrane 23.05 23.1
CDX68441 Canola plasma membrane 22.95 22.82
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 10.35 22.77
CDY16404 Canola plastid 7.47 21.28
CDY58413 Canola cytosol, plastid 6.19 21.17
CDY57805 Canola plastid 7.36 20.97
CDX69605 Canola plastid 6.08 20.8
CDY01873 Canola cytosol 5.23 18.56
CDX96058 Canola cytosol 5.12 18.18
CDX68436 Canola plasma membrane 5.02 15.99
CDY39288 Canola cytosol 2.88 13.64
CDY22536 Canola mitochondrion, plasma membrane 26.68 13.49
CDY35403 Canola mitochondrion, plasma membrane 26.68 13.44
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 2.35 12.29
CDY23799 Canola cytosol, peroxisome, plasma membrane 2.45 11.27
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300MapMan:5.8.5GO:A0A078GDF2UniProt:A0A078GDF2InterPro:ABCA
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY23042ProteinID:CDY23042ProteinID:CDY23042.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00021506001InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF12698ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF193
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EF238ESEG:seg::
Description
BnaC07g31450DBnaC07g31450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDF2]
Coordinates
chrLK032139:-:258427..262909
Molecular Weight (calculated)
103595.0 Da
IEP (calculated)
7.481
GRAVY (calculated)
0.148
Length
937 amino acids
Sequence
(BLAST)
001: MILQQGLPLL YQQFTALFKK NLLLSWRNKR STCLQLFSSF FFILVIFCIE EAMKASEASS SAYKNVTDPT LLFSPPILPC EDKFFVKLPC YDFVWSGNNS
101: RRVTEIVSAI MANNPGRPIP TNKVQSFKGP EEVDAWFMSH PLQVPGALHF VERNATVISY GVQTNSSSEE KRGRIEDPTF KFLVPLQIAA EREIARSLIG
201: DPKFGWGFGF KEFARPAIIG KTISALKVMG PIFFLAFSMF GFVLQLGSLV TEKELKLRQA MTMMGVFDTA YWLSWLIWEG LLTFVSSLFL VLFGMMFQFD
301: FFLKNSFFVV FLLFLLFQFN MISLAFVLSS FISKSSSATT VGFLVFLISF ILQIVSATGF PYSSAYSASR RAIWSLFPPN TFSAGLKLLL DATSTPESSG
401: ISWSERAVCE GGMSTCVISV DIIYQWQVGS FLFWFVLAMY FDNIIPNASG VRKPIFYFLT PGYWTGKGGN KMEVPPVEHV ASEDQDVLEE ETLVKQQAMD
501: GIVDPNIAVQ IHGLAKTYPG TTKLGCCKCT KTSPFHAVKG LWMNIAKDQL FCMLGPNGAG KTTSISCLTG INPITGGDAL IYGDSVRSSV GMSNIRKMIG
601: VCPQFDILWD ALSSEEHLHL FASIKGLPPP SINSTAEKLL ADVKLTGASK VRAGSYSGGM KRRLSVAVAL IGDPKLTTGM DPITRRHVWD IIQESKKGRA
701: IILTTHSMEE ADILSDRIGI MAKGRLRCIG TSIRLKSRFG TGFVATVSFT ESKKDNSNAS GDSHEPVKRF FNEHLKVEPA DENKAFMTFV IPHDKEKLLT
801: GFFEELENRE SEFGISDIQL GLATLEEVFL NIARRAELEN ATTEGIMVTL DLVSGISLEI PVGARFVGIP DTESAENPSG VMVEVYWQQD GSGSMCITGH
901: SSEMRIPQNV LVTRPPSPNA LGHKGLRQAV RGIVIDL
Best Arabidopsis Sequence Match ( AT5G61690.2 )
(BLAST)
001: MILQEGLPLL YQQFTALFGK NLLLSWRNKR ATCLQIFSSF FFILLIFCIE EAMKASDASS SAYKNITDPT LLVSPPILPC EDKFFVKLPC YDFVWSGNNS
101: RRVTDIVSAI MANNPGRPIP TNKVQSFKEP DEVDTWLLSH PLQVPGALHF VERNASVISY GVQTNSSSES KRGQTEDPTF KFLVPLQVAA EREIARSLLG
201: DPNFGWGLGF KEFARPAIIT ETTSALSVMG PVFFLAFSMF GFVLQLGALV TEKELKLRQA MTMMGVYDSA YWLSWLTWEG ILTLVSSLFL VLFGMIFRFD
301: FFLKNSFVLV FLLFLLFQFN MIGLAFALSS IISKSSSATT VGFLVFLIGF ITQFVSATGF PYSSSYAVSR RVMWSLFPPN TFSAGLKLLL DATSTPKSSG
401: ISWSNRAVCE GGQATCVISI NIIYQWLLGT FLFWFVLAIY FDNIIPNASG VRKPIFYFLA PGYWTGKGGN KVEEGSIFSC VGSVPLVEHN TPNDKDVLEE
501: ETEVKQQAMD GIADPNIAVQ IHGLAKTYPG TTKLGCCKCT KTSPFHAVKG LWMNIAKDQL FCLLGPNGAG KTTTISCLTG INPVTGGDAL IYGDSIRSSV
601: GISNIRKMIG VCPQFDILWD ALSSEQHLHL FASIKGLPPA SIKSTAEKLL ADVKLTGAAK VRAGSYSGGM KRRLSVAVAL IGDPKLVFLD EPTTGMDPIT
701: RRHVWDIIQE SKKGRAIILT THSMEEADIL SDRIGIMAKG RLRCIGTSIR LKSRFGTGFV ATVSFIENKN DNNIGVGASH EPLKKFFKEH LKVEPTEENK
801: AFMTFVIPHD KENLLTGFFE ELQNRESEFG ISDIQLGLAT LEEVFLNIAR QAELESATAE GNMVTLELAS GISLEIPVGA RFVGIPDTEN AENPSGVMVE
901: VYWQQDGSGS MCISGHSSEM RVPQNVPVTR PPSPNALGHK SLRQGVRGIV IDL
Arabidopsis Description
ABCA11ABC transporter A family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKF2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.