Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 2
- plasma membrane 4
- cytosol 1
- extracellular 1
- vacuole 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23042 | Canola | plasma membrane | 87.41 | 88.9 |
| CDY23800 | Canola | plasma membrane | 83.63 | 87.1 |
| AT5G61730.2 | Thale cress | plasma membrane, plastid | 83.84 | 84.11 |
| CDY02118 | Canola | plasma membrane | 86.88 | 83.22 |
| Bra012930.1-P | Field mustard | plasma membrane | 78.7 | 82.6 |
| AT3G47730.1 | Thale cress | mitochondrion, plasma membrane | 76.39 | 74.06 |
| GSMUA_Achr3P20540_001 | Banana | cytosol, extracellular, nucleus | 12.59 | 70.59 |
| VIT_17s0000g05850.t01 | Wine grape | plasma membrane | 69.05 | 68.68 |
| PGSC0003DMT400046727 | Potato | plasma membrane | 64.74 | 66.06 |
| GSMUA_Achr7P23880_001 | Banana | plasma membrane | 65.48 | 65.14 |
| KRH54517 | Soybean | plasma membrane | 65.79 | 64.84 |
| TraesCS1B01G356100.2 | Wheat | plasma membrane | 64.43 | 63.69 |
| TraesCS1D01G345100.2 | Wheat | mitochondrion, plasma membrane, plastid | 64.43 | 63.63 |
| EES14950 | Sorghum | mitochondrion, plasma membrane, plastid | 64.11 | 63.58 |
| TraesCS1A01G342900.2 | Wheat | plasma membrane | 64.32 | 63.46 |
| Os08t0398000-01 | Rice | plasma membrane | 64.22 | 63.22 |
| KRH63387 | Soybean | plasma membrane, plastid | 63.38 | 62.79 |
| Zm00001d032279_P005 | Maize | golgi, plastid | 63.69 | 62.58 |
| HORVU1Hr1G075640.9 | Barley | golgi | 63.48 | 61.8 |
| GSMUA_Achr3P20560_001 | Banana | plastid | 18.36 | 60.98 |
| Solyc06g070960.1.1 | Tomato | plasma membrane | 55.93 | 57.56 |
| AT3G47790.1 | Thale cress | plasma membrane | 24.97 | 26.42 |
| AT5G61700.1 | Thale cress | plasma membrane | 23.5 | 24.43 |
| AT3G47750.1 | Thale cress | mitochondrion, plasma membrane | 23.92 | 24.33 |
| AT5G61740.1 | Thale cress | plasma membrane | 23.09 | 24.2 |
| AT3G47780.1 | Thale cress | plasma membrane | 23.61 | 24.06 |
| AT3G47740.1 | Thale cress | plasma membrane | 23.4 | 23.93 |
| AT3G47770.2 | Thale cress | endoplasmic reticulum, golgi, plasma membrane, plastid | 22.77 | 23.43 |
| AT3G47760.3 | Thale cress | plasma membrane | 22.98 | 23.4 |
| AT5G14100.1 | Thale cress | plastid | 6.19 | 21.22 |
| AT1G67940.1 | Thale cress | cytosol | 5.67 | 20.53 |
| AT1G65410.1 | Thale cress | plastid | 7.35 | 20.29 |
| AT2G41700.1 | Thale cress | mitochondrion, plasma membrane | 27.81 | 14.08 |
Protein Annotations
| MapMan:24.1.3.2.1 | Gene3D:3.40.50.300 | MapMan:5.8.5 | EntrezGene:836291 | InterPro:AAA+_ATPase | InterPro:ABCA |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:ANM70574.1 | ArrayExpress:AT5G61690 | EnsemblPlantsGene:AT5G61690 | RefSeq:AT5G61690 |
| TAIR:AT5G61690 | RefSeq:AT5G61690-TAIR-G | EnsemblPlants:AT5G61690.2 | Symbol:ATATH15 | ProteinID:BAB09013.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0043231 | GO:GO:0055085 |
| InterPro:IPR003439 | RefSeq:NP_001332171.1 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF12698 | ScanProsite:PS00211 |
| PFscan:PS50893 | PANTHER:PTHR19229 | PANTHER:PTHR19229:SF193 | UniProt:Q9FKF2 | SMART:SM00382 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | UniParc:UPI000004C58F | SEG:seg | : | : | : |
Description
ABCA11ABC transporter A family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKF2]
Coordinates
chr5:-:24789237..24793528
Molecular Weight (calculated)
104713.0 Da
IEP (calculated)
7.138
GRAVY (calculated)
0.156
Length
953 amino acids
Sequence
(BLAST)
(BLAST)
001: MILQEGLPLL YQQFTALFGK NLLLSWRNKR ATCLQIFSSF FFILLIFCIE EAMKASDASS SAYKNITDPT LLVSPPILPC EDKFFVKLPC YDFVWSGNNS
101: RRVTDIVSAI MANNPGRPIP TNKVQSFKEP DEVDTWLLSH PLQVPGALHF VERNASVISY GVQTNSSSES KRGQTEDPTF KFLVPLQVAA EREIARSLLG
201: DPNFGWGLGF KEFARPAIIT ETTSALSVMG PVFFLAFSMF GFVLQLGALV TEKELKLRQA MTMMGVYDSA YWLSWLTWEG ILTLVSSLFL VLFGMIFRFD
301: FFLKNSFVLV FLLFLLFQFN MIGLAFALSS IISKSSSATT VGFLVFLIGF ITQFVSATGF PYSSSYAVSR RVMWSLFPPN TFSAGLKLLL DATSTPKSSG
401: ISWSNRAVCE GGQATCVISI NIIYQWLLGT FLFWFVLAIY FDNIIPNASG VRKPIFYFLA PGYWTGKGGN KVEEGSIFSC VGSVPLVEHN TPNDKDVLEE
501: ETEVKQQAMD GIADPNIAVQ IHGLAKTYPG TTKLGCCKCT KTSPFHAVKG LWMNIAKDQL FCLLGPNGAG KTTTISCLTG INPVTGGDAL IYGDSIRSSV
601: GISNIRKMIG VCPQFDILWD ALSSEQHLHL FASIKGLPPA SIKSTAEKLL ADVKLTGAAK VRAGSYSGGM KRRLSVAVAL IGDPKLVFLD EPTTGMDPIT
701: RRHVWDIIQE SKKGRAIILT THSMEEADIL SDRIGIMAKG RLRCIGTSIR LKSRFGTGFV ATVSFIENKN DNNIGVGASH EPLKKFFKEH LKVEPTEENK
801: AFMTFVIPHD KENLLTGFFE ELQNRESEFG ISDIQLGLAT LEEVFLNIAR QAELESATAE GNMVTLELAS GISLEIPVGA RFVGIPDTEN AENPSGVMVE
901: VYWQQDGSGS MCISGHSSEM RVPQNVPVTR PPSPNALGHK SLRQGVRGIV IDL
101: RRVTDIVSAI MANNPGRPIP TNKVQSFKEP DEVDTWLLSH PLQVPGALHF VERNASVISY GVQTNSSSES KRGQTEDPTF KFLVPLQVAA EREIARSLLG
201: DPNFGWGLGF KEFARPAIIT ETTSALSVMG PVFFLAFSMF GFVLQLGALV TEKELKLRQA MTMMGVYDSA YWLSWLTWEG ILTLVSSLFL VLFGMIFRFD
301: FFLKNSFVLV FLLFLLFQFN MIGLAFALSS IISKSSSATT VGFLVFLIGF ITQFVSATGF PYSSSYAVSR RVMWSLFPPN TFSAGLKLLL DATSTPKSSG
401: ISWSNRAVCE GGQATCVISI NIIYQWLLGT FLFWFVLAIY FDNIIPNASG VRKPIFYFLA PGYWTGKGGN KVEEGSIFSC VGSVPLVEHN TPNDKDVLEE
501: ETEVKQQAMD GIADPNIAVQ IHGLAKTYPG TTKLGCCKCT KTSPFHAVKG LWMNIAKDQL FCLLGPNGAG KTTTISCLTG INPVTGGDAL IYGDSIRSSV
601: GISNIRKMIG VCPQFDILWD ALSSEQHLHL FASIKGLPPA SIKSTAEKLL ADVKLTGAAK VRAGSYSGGM KRRLSVAVAL IGDPKLVFLD EPTTGMDPIT
701: RRHVWDIIQE SKKGRAIILT THSMEEADIL SDRIGIMAKG RLRCIGTSIR LKSRFGTGFV ATVSFIENKN DNNIGVGASH EPLKKFFKEH LKVEPTEENK
801: AFMTFVIPHD KENLLTGFFE ELQNRESEFG ISDIQLGLAT LEEVFLNIAR QAELESATAE GNMVTLELAS GISLEIPVGA RFVGIPDTEN AENPSGVMVE
901: VYWQQDGSGS MCISGHSSEM RVPQNVPVTR PPSPNALGHK SLRQGVRGIV IDL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.