Factsheet for AT5G61730.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 3
mitochondrion 3
golgi 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23040	Canola	plasma membrane	85.79	85.43
Bra012928.1-P	Field mustard	plasma membrane	83.16	85.22
CDY02116	Canola	plasma membrane	74.84	84.64
AT5G61690.2	Thale cress	plasma membrane	84.11	83.84
CDY62594	Canola	cytosol	40.21	83.59
CDY64180	Canola	plasma membrane	55.05	83.41
CDY52820	Canola	cytosol, nucleus, plasma membrane	75.68	81.89
CDY62596	Canola	cytosol, plasma membrane, vacuole	24.32	75.24
AT3G47730.1	Thale cress	mitochondrion, plasma membrane	76.53	73.96
GSMUA_Achr3P20540_001	Banana	cytosol, extracellular, nucleus	12.63	70.59
VIT_17s0000g05850.t01	Wine grape	plasma membrane	69.47	68.89
PGSC0003DMT400046727	Potato	plasma membrane	65.05	66.17
GSMUA_Achr7P23880_001	Banana	plasma membrane	65.68	65.14
KRH54517	Soybean	plasma membrane	66.0	64.84
TraesCS1B01G356100.2	Wheat	plasma membrane	64.53	63.59
EES14950	Sorghum	mitochondrion, plasma membrane, plastid	64.21	63.48
KRH63387	Soybean	plasma membrane, plastid	64.21	63.41
TraesCS1D01G345100.2	Wheat	mitochondrion, plasma membrane, plastid	64.32	63.32
TraesCS1A01G342900.2	Wheat	plasma membrane	64.32	63.25
Os08t0398000-01	Rice	plasma membrane	64.32	63.12
Zm00001d032279_P005	Maize	golgi, plastid	63.68	62.37
HORVU1Hr1G075640.9	Barley	golgi	63.68	61.8
GSMUA_Achr3P20560_001	Banana	plastid	18.42	60.98
Solyc06g070960.1.1	Tomato	plasma membrane	56.0	57.45
AT3G47790.1	Thale cress	plasma membrane	25.05	26.42
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	24.84	25.19
AT5G61700.1	Thale cress	plasma membrane	24.0	24.86
AT5G61740.1	Thale cress	plasma membrane	23.68	24.75
AT3G47740.1	Thale cress	plasma membrane	24.0	24.46
AT3G47780.1	Thale cress	plasma membrane	23.89	24.28
AT3G47760.3	Thale cress	plasma membrane	23.58	23.93
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	23.26	23.87
AT5G14100.1	Thale cress	plastid	6.32	21.58
AT1G67940.1	Thale cress	cytosol	5.79	20.91
AT1G65410.1	Thale cress	plastid	7.47	20.58
AT2G41700.1	Thale cress	mitochondrion, plasma membrane	27.79	14.03

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	MapMan:5.8.5	EntrezGene:836295	InterPro:AAA+_ATPase	InterPro:ABCA
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:AED97510.1	ProteinID:ANM69292.1	ArrayExpress:AT5G61730	EnsemblPlantsGene:AT5G61730
RefSeq:AT5G61730	TAIR:AT5G61730	RefSeq:AT5G61730-TAIR-G	EnsemblPlants:AT5G61730.2	Symbol:ATATH11	Unigene:At.43907
ProteinID:BAB10073.1	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005789	GO:GO:0006810	GO:GO:0006869	GO:GO:0007275	GO:GO:0008150
GO:GO:0009791	GO:GO:0015245	GO:GO:0015908	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0048316	GO:GO:0055085	InterPro:IPR003439	RefSeq:NP_001330984.1
RefSeq:NP_200981.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19229	PANTHER:PTHR19229:SF193	UniProt:Q9FLT5	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI00000A0E2F	SEG:seg	:	:	:	:

Description

ABCA9ABC transporter A family member 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLT5]

Coordinates

chr5:-:24803427..24807920

Molecular Weight (calculated)

105437.0 Da

IEP (calculated)

7.644

GRAVY (calculated)

0.120

Length

950 amino acids

Sequence
(BLAST)

001: MTLREGLPLF HQQFTALFKK NLLLSWRNKR ATCLHLFSSF FFILLIFSIE ESSKASDLTS TRHKNVTDPK ALVSLPILPC EDKFFVRLPC FDFVWSGNQS
101: RRVTDIVSAI MANNPGRPIP TNKVQSFTKP EEVDAWFMSH PSQVTGALHF VEKNATVISY GIQTNSSSEK KRGRREDPTF KFLVPLQIAA EREIARSLIG
201: DPKFSWDFGF KEFARPAIGG EVIISAFYLM GPVFFLAFSM FGFVLQLGSV VTEKELKLRE AMTTMGVYES AYWLSWLIWE GILTFVSSLF LVLFGMMFQF
301: EFFLKNSFVL VFLLFFLFQF NMIGLAFALS SIISKSSSAT TVGFLVFLVG FITQIVTTAG FPYSSAYSIG SRVIWSLFPP NTFSAGLQLL LEATSSPGDS
401: GISWSERAIC AGGESTCVIT TNKIYIWLVG TFFFWFVLAL YFDNIIPNAS GVRKSIFYFL KPSYWTGKEG NKVEEGSICS CIGSVPPVEH ITPEDEDVLE
501: EEILVKQQAM DGRVDPNIAV QIHGLAKTYP GTTKLGCCKC TKTSPFHAVK GLWMNIAKDQ LFCLLGPNGA GKTTTISCLT GINPVTGGDA KIYGNSIRSS
601: VGMSNIRKMI GVCPQFDILW DALSSEEHLH LFASIKGLPP SSIKSIAEKL LVDVKLTGSA KIRAGSYSGG MKRRLSVAIA LIGDPKLVFL DEPTTGMDPI
701: TRRHVWDIIQ ESKKGRAIIL TTHSMEEADI LSDRIGIMAK GRLRCIGTSI RLKSRFGTGF VATVSFIENK KDGAPEPLKR FFKERLKVEP TEENKAFMTF
801: VIPHDKEQLL KGFFAELQDR ESEFGIADIQ LGLATLEEVF LNIARRAELE SATVEGTMVT LELESGIAVE IPVGARFVGI PGTENAENPR GLMVEVYWQQ
901: DGSGSMCISG HSAEMRIPEN VSVIYEPSSQ VLGHGQRRVR GIVIDYESNN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.