Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 5
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH54517 | Soybean | plasma membrane | 91.89 | 91.42 |
| VIT_17s0000g05850.t01 | Wine grape | plasma membrane | 68.81 | 69.1 |
| PGSC0003DMT400046727 | Potato | plasma membrane | 65.38 | 67.34 |
| CDY24159 | Canola | golgi, mitochondrion | 64.24 | 65.96 |
| Bra018116.1-P | Field mustard | golgi, mitochondrion | 66.53 | 64.91 |
| AT3G47730.1 | Thale cress | mitochondrion, plasma membrane | 66.32 | 64.9 |
| CDY36933 | Canola | golgi, mitochondrion | 64.97 | 64.77 |
| CDY64180 | Canola | plasma membrane | 42.2 | 64.75 |
| GSMUA_Achr7P23880_001 | Banana | plasma membrane | 64.24 | 64.51 |
| AT5G61730.2 | Thale cress | plasma membrane, plastid | 63.41 | 64.21 |
| GSMUA_Achr3P20540_001 | Banana | cytosol, extracellular, nucleus | 11.33 | 64.12 |
| CDY62594 | Canola | cytosol | 30.35 | 63.9 |
| CDY23040 | Canola | plasma membrane | 63.1 | 63.63 |
| CDY02116 | Canola | plasma membrane | 55.41 | 63.45 |
| AT5G61690.2 | Thale cress | plasma membrane | 62.79 | 63.38 |
| Bra012928.1-P | Field mustard | plasma membrane | 61.02 | 63.32 |
| Os08t0398000-01 | Rice | plasma membrane | 63.62 | 63.22 |
| GSMUA_Achr3P20560_001 | Banana | plastid | 18.82 | 63.07 |
| CDY23042 | Canola | plasma membrane | 61.33 | 62.97 |
| EES14950 | Sorghum | mitochondrion, plasma membrane, plastid | 62.68 | 62.75 |
| TraesCS1B01G356100.2 | Wheat | plasma membrane | 62.79 | 62.66 |
| TraesCS1D01G345100.2 | Wheat | mitochondrion, plasma membrane, plastid | 62.68 | 62.49 |
| TraesCS1A01G342900.2 | Wheat | plasma membrane | 62.68 | 62.42 |
| Zm00001d032279_P005 | Maize | golgi, plastid | 62.47 | 61.96 |
| HORVU1Hr1G075640.9 | Barley | golgi | 62.58 | 61.49 |
| CDY23800 | Canola | plasma membrane | 58.42 | 61.42 |
| CDY52820 | Canola | cytosol, nucleus, plasma membrane | 56.03 | 61.39 |
| CDX68434 | Canola | plasma membrane | 44.07 | 59.72 |
| CDY02118 | Canola | plasma membrane | 60.81 | 58.79 |
| Bra012930.1-P | Field mustard | plasma membrane | 54.37 | 57.6 |
| CDX68435 | Canola | mitochondrion, plastid | 15.18 | 55.94 |
| CDY62596 | Canola | cytosol, plasma membrane, vacuole | 17.78 | 55.7 |
| Solyc06g070960.1.1 | Tomato | plasma membrane | 53.33 | 55.4 |
| KRH54520 | Soybean | plasma membrane, plastid | 22.97 | 27.39 |
| KRH56933 | Soybean | plasma membrane, plastid | 24.12 | 24.45 |
| KRH03450 | Soybean | plasma membrane, plastid | 23.91 | 24.11 |
| KRH63384 | Soybean | plasma membrane | 18.19 | 24.04 |
| KRG88422 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 12.16 | 23.83 |
| KRH63056 | Soybean | extracellular, plasma membrane, vacuole | 2.08 | 23.53 |
| KRG94568 | Soybean | mitochondrion | 5.72 | 21.07 |
| KRH40333 | Soybean | plastid | 7.38 | 20.58 |
| KRH00900 | Soybean | plastid | 7.48 | 18.23 |
| KRH41857 | Soybean | plasma membrane | 4.78 | 17.69 |
| KRH66908 | Soybean | cytosol | 25.47 | 13.42 |
Protein Annotations
| EntrezGene:100798138 | MapMan:24.1.3.2.1 | Gene3D:3.40.50.300 | MapMan:5.8.5 | InterPro:AAA+_ATPase | InterPro:ABCA |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EMBL:ACUP02002678 | EnsemblPlantsGene:GLYMA_04G173000 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0043231 | GO:GO:0055085 | UniProt:I1JWX8 |
| InterPro:IPR003439 | EnsemblPlants:KRH63387 | ProteinID:KRH63387 | ProteinID:KRH63387.1 | ProteinID:KRH63388.1 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF12698 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19229 | PANTHER:PTHR19229:SF193 |
| SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0002339638 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr4:+:43281639..43289665
Molecular Weight (calculated)
106856.0 Da
IEP (calculated)
8.376
GRAVY (calculated)
0.097
Length
962 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTISGIPL VALQVKALLK KNLLLSWRNK RASLLQLLSP FMFIFLIFAI DKAMKAKTST SSSYKSVTEP PMEPSLPITP CEDKLFINLP CYDFVWSGHQ
101: SPKFRIIVAR IMNNNPGRPI PPSKVKSFKD KSEVDAWLFS NPMRCPAALH FIERNDTVIG YGLQTNSTSL QRRGKFENPT ASFQLAAERE IARYLIGDAE
201: FSWNVFLREF AHPSTTPFSV VASIGPAFFL VIAIFNFVLQ IRSLVTEKEL KLRQAMTMMG LYDFAYWFSW LIWEAVVAIL SSLLIVLFGM MFQFRFFLDN
301: SFVVLFFFFF LFELSMTGLA FMISAFIRKS SSATTVGFYI FIVGFVTQLV ALVGFPYKDS FSKTTRNLWS LFPPNLFSQG INVLSDAVAT SEDKGVSWSK
401: RGECALNKTD CVITIDDIYK WLAATFFLWF VLAIYFDNII PNASGVRKSI WYFLNPNYWM GKGGQKVKEG GVCSCIGSAL CQEQSTPDDD VLEEENKVKQ
501: QLTEGLVDAN IAVQIRGLAK TYPGTRSIGC CFKCKRTSPY NAVKGLWVNF AKDQLFCLLG PNGAGKTTAI NCLAGITPVT DGDALIYGHS IRSSSGLSNI
601: QKLIGVCPQF DILWDALSGQ EHLQLFATIK GLSPSSIKSI TQTSLAEVRL TDASKVRAGS YSGGMKRRLS FAIALIGDPK LVILDEPTTG MDPIIRRHVW
701: DIIENAKRGR AIVLTTHSME EADILSDRIG IMAKGSLRCI GTSIRLKSRF GAGFIANISF NGNNIECSPA SGDAISTEHH EAVKKLFKNH LDVVPKEENN
801: NFLTFVIPHD REALLKNFFS ELQDREKEFG ISDIQLGLTT LEEVFLNIAR QAELESAAAE GRLVTLTLTS GESVQIPIGA RFVGIPGTES AENPTWFMVE
901: VYWEQDDTGA LCIASHSQKV PIPHGVQLSS SPSRRHRRYL GQSGTVHGVV IDPSQVSSVD FQ
101: SPKFRIIVAR IMNNNPGRPI PPSKVKSFKD KSEVDAWLFS NPMRCPAALH FIERNDTVIG YGLQTNSTSL QRRGKFENPT ASFQLAAERE IARYLIGDAE
201: FSWNVFLREF AHPSTTPFSV VASIGPAFFL VIAIFNFVLQ IRSLVTEKEL KLRQAMTMMG LYDFAYWFSW LIWEAVVAIL SSLLIVLFGM MFQFRFFLDN
301: SFVVLFFFFF LFELSMTGLA FMISAFIRKS SSATTVGFYI FIVGFVTQLV ALVGFPYKDS FSKTTRNLWS LFPPNLFSQG INVLSDAVAT SEDKGVSWSK
401: RGECALNKTD CVITIDDIYK WLAATFFLWF VLAIYFDNII PNASGVRKSI WYFLNPNYWM GKGGQKVKEG GVCSCIGSAL CQEQSTPDDD VLEEENKVKQ
501: QLTEGLVDAN IAVQIRGLAK TYPGTRSIGC CFKCKRTSPY NAVKGLWVNF AKDQLFCLLG PNGAGKTTAI NCLAGITPVT DGDALIYGHS IRSSSGLSNI
601: QKLIGVCPQF DILWDALSGQ EHLQLFATIK GLSPSSIKSI TQTSLAEVRL TDASKVRAGS YSGGMKRRLS FAIALIGDPK LVILDEPTTG MDPIIRRHVW
701: DIIENAKRGR AIVLTTHSME EADILSDRIG IMAKGSLRCI GTSIRLKSRF GAGFIANISF NGNNIECSPA SGDAISTEHH EAVKKLFKNH LDVVPKEENN
801: NFLTFVIPHD REALLKNFFS ELQDREKEFG ISDIQLGLTT LEEVFLNIAR QAELESAAAE GRLVTLTLTS GESVQIPIGA RFVGIPGTES AENPTWFMVE
901: VYWEQDDTGA LCIASHSQKV PIPHGVQLSS SPSRRHRRYL GQSGTVHGVV IDPSQVSSVD FQ
001: MTLQRGLPLL LQQYTALFKK NLLLSWRSKR ATFLQLFASF FFILLIFCIQ AAMEKSFASS TALKTVTDPT ALISPPIPPC EDKFFVNLPC YDFVWSGNRS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS
Arabidopsis Description
ABCA2ATH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6R6]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.