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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:golgi
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY23042 Canola plasma membrane 93.33 91.14
CDY02118 Canola plasma membrane 92.9 85.43
AT5G61690.2 Thale cress plasma membrane 87.1 83.63
CDY64180 Canola plasma membrane 54.21 79.11
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 31.48 78.9
CDY23040 Canola plasma membrane 81.2 77.88
CDY02116 Canola plasma membrane 71.48 77.86
CDY62594 Canola cytosol 38.36 76.81
CDY52820 Canola cytosol, nucleus, plasma membrane 71.69 74.72
CDY24159 Canola golgi, mitochondrion 70.82 69.16
CDY36933 Canola golgi, mitochondrion 72.13 68.39
CDY62596 Canola cytosol, plasma membrane, vacuole 22.84 68.08
GSMUA_Achr3P20540_001 Banana cytosol, extracellular, nucleus 12.24 65.88
CDX68434 Canola plasma membrane 50.05 64.51
VIT_17s0000g05850.t01 Wine grape plasma membrane 66.45 63.47
GSMUA_Achr7P23880_001 Banana plasma membrane 63.5 60.65
PGSC0003DMT400046727 Potato plasma membrane 61.53 60.28
CDX68435 Canola mitochondrion, plastid 17.16 60.15
EES14950 Sorghum mitochondrion, plasma membrane, plastid 62.95 59.94
KRH54517 Soybean plasma membrane 63.28 59.88
TraesCS1B01G356100.2 Wheat plasma membrane 62.62 59.44
TraesCS1A01G342900.2 Wheat plasma membrane 62.62 59.32
TraesCS1D01G345100.2 Wheat mitochondrion, plasma membrane, plastid 62.51 59.27
Os08t0398000-01 Rice plasma membrane 62.4 58.99
Zm00001d032279_P005 Maize golgi, plastid 62.4 58.87
KRH63387 Soybean plasma membrane, plastid 61.42 58.42
GSMUA_Achr3P20560_001 Banana plastid 18.25 58.19
HORVU1Hr1G075640.9 Barley golgi 61.97 57.92
Solyc06g070960.1.1 Tomato plasma membrane 55.08 54.43
CDX94927 Canola cytosol 4.15 31.93
CDY02120 Canola cytosol, nucleus, plasma membrane 20.77 28.83
CDY31786 Canola cytosol, nucleus, plasma membrane 20.77 28.79
CDY23043 Canola cytosol, mitochondrion 15.96 28.52
CDX68439 Canola nucleus 4.81 27.85
CDX77874 Canola plasma membrane 22.84 25.21
CDY24573 Canola plasma membrane 4.37 25.16
CDY21797 Canola plasma membrane 24.37 24.67
CDX68440 Canola cytosol, mitochondrion 3.72 24.46
CDY62599 Canola plasma membrane 22.4 23.59
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 22.84 23.59
CDY23798 Canola nucleus, peroxisome, plasma membrane 9.84 23.44
CDY02114 Canola plasma membrane 22.51 23.22
CDY23039 Canola plasma membrane 22.51 23.2
CDY36931 Canola plastid 23.5 23.09
CDY24157 Canola plastid 23.93 23.03
CDY24158 Canola plasma membrane 23.17 22.89
CDY36930 Canola plasma membrane 23.5 22.82
CDY39546 Canola plasma membrane 23.28 22.78
CDX77421 Canola plasma membrane 23.17 22.67
CDX83025 Canola plasma membrane 23.28 22.61
CDY24156 Canola plasma membrane 23.28 22.61
CDX68441 Canola plasma membrane 22.73 22.08
CDY58413 Canola cytosol, plastid 6.56 21.9
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 10.16 21.83
CDX69605 Canola plastid 6.45 21.53
CDY57805 Canola plastid 7.54 20.97
CDY16404 Canola plastid 7.54 20.97
CDY01873 Canola cytosol 5.57 19.32
CDX96058 Canola cytosol 5.46 18.94
CDX68436 Canola plasma membrane 5.03 15.65
CDY39288 Canola cytosol 2.95 13.64
CDY35403 Canola mitochondrion, plasma membrane 26.34 12.96
CDY22536 Canola mitochondrion, plasma membrane 26.23 12.95
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 2.08 10.61
CDY23799 Canola cytosol, peroxisome, plasma membrane 2.19 9.8
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300MapMan:5.8.5GO:A0A078GBH0UniProt:A0A078GBH0InterPro:ABCA
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY23800ProteinID:CDY23800ProteinID:CDY23800.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00024195001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF12698ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF193SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EE3FC5SEG:seg:::
Description
BnaA01g21510DBnaA01g21510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBH0]
Coordinates
chrLK032149:+:233975..238243
Molecular Weight (calculated)
101442.0 Da
IEP (calculated)
8.453
GRAVY (calculated)
0.147
Length
915 amino acids
Sequence
(BLAST)
001: MILQQGLPLL YQHFTALFKK NLLLSWRNKR STCLQLFSSF FFILVIFCIE EAMKASEASS SAYKNVTDPT LLFSLPILPC EDKFFVKLPC YDFVWSGNNS
101: RRVTDIVSAI LTIRGDQFRP TRFNHSKRLR RNATIISYGV QTNSSSEKKR GRIEDPTFKF LVPLQIAAER EIARSLIGDP KFGWDFGFKE FARPAIIAEV
201: ISALKVMGPI FFLAFSMFGF VLQLGSLVTE KELKLRQAMT MMGVFDTAYW LSWLTWEGLL TFVSSLFLVL FGMMFQFDFF LKNSFFVVFL LFLLFQFNMI
301: SLAFVLSSFI SKSSSATTVG FLVFLIGFIT QIVSATGFPY SNAYPASRRV IWSLFPPNTF SAGLKLLLDA TSTPASSGIS WSERAVCEGG MSTCVLSIDI
401: IYQWQVGTFL FWFVLAIYFD NIIPNASGVR KPIFYFLTPG YWTGKGGNKV EVPPVEHVAS EDQDVLEEET LVKQQAMDGI VDPNIAVQIH GLAKTYPGTT
501: KLGCCKCTKT SPFHAVKGLW MNIAKDQLFC LLGPNGAGKT TSISSLTGIN PITGGDAFIY GDSVRSSVGM SNIRKMIGVC PQFDILWDAL SSEEHLHLFA
601: SIKGLPPASI NSTAEKLLAD VKLTGAAKVR AGSYSGGMKR RLSVAIALIG DPKLTTGMDP ITKRDVWDII QESKKGRAII LTTHSMEEAD ILSDRIGIMA
701: KGRLRCIGTS IRLKSRFGAG FVATVSFTES KKDYRNAAGD SHEPVKRFFN EHLKVEPADE NKAFMTFVIP HDKEKLLTGF FEELESRKSE FGISDIQLGL
801: ATLEEVFLNI ARRAELESAT VEGTMVTLDL ESGISIEIPV GARFVGIPDT ENAENPSGIM VEVYWQQDGS GSMCITGHSS EMRVPQNVQV TRPPSPNALG
901: HKGLRQAVRG IVIDL
Best Arabidopsis Sequence Match ( AT5G61690.2 )
(BLAST)
001: MILQEGLPLL YQQFTALFGK NLLLSWRNKR ATCLQIFSSF FFILLIFCIE EAMKASDASS SAYKNITDPT LLVSPPILPC EDKFFVKLPC YDFVWSGNNS
101: RRVTDIVSAI MANNPGRPIP TNKVQSFKEP DEVDTWLLSH PLQVPGALHF VERNASVISY GVQTNSSSES KRGQTEDPTF KFLVPLQVAA EREIARSLLG
201: DPNFGWGLGF KEFARPAIIT ETTSALSVMG PVFFLAFSMF GFVLQLGALV TEKELKLRQA MTMMGVYDSA YWLSWLTWEG ILTLVSSLFL VLFGMIFRFD
301: FFLKNSFVLV FLLFLLFQFN MIGLAFALSS IISKSSSATT VGFLVFLIGF ITQFVSATGF PYSSSYAVSR RVMWSLFPPN TFSAGLKLLL DATSTPKSSG
401: ISWSNRAVCE GGQATCVISI NIIYQWLLGT FLFWFVLAIY FDNIIPNASG VRKPIFYFLA PGYWTGKGGN KVEEGSIFSC VGSVPLVEHN TPNDKDVLEE
501: ETEVKQQAMD GIADPNIAVQ IHGLAKTYPG TTKLGCCKCT KTSPFHAVKG LWMNIAKDQL FCLLGPNGAG KTTTISCLTG INPVTGGDAL IYGDSIRSSV
601: GISNIRKMIG VCPQFDILWD ALSSEQHLHL FASIKGLPPA SIKSTAEKLL ADVKLTGAAK VRAGSYSGGM KRRLSVAVAL IGDPKLVFLD EPTTGMDPIT
701: RRHVWDIIQE SKKGRAIILT THSMEEADIL SDRIGIMAKG RLRCIGTSIR LKSRFGTGFV ATVSFIENKN DNNIGVGASH EPLKKFFKEH LKVEPTEENK
801: AFMTFVIPHD KENLLTGFFE ELQNRESEFG ISDIQLGLAT LEEVFLNIAR QAELESATAE GNMVTLELAS GISLEIPVGA RFVGIPDTEN AENPSGVMVE
901: VYWQQDGSGS MCISGHSSEM RVPQNVPVTR PPSPNALGHK SLRQGVRGIV IDL
Arabidopsis Description
ABCA11ABC transporter A family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKF2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.