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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY23039 Canola plasma membrane 97.07 96.96
Bra012927.1-P Field mustard cytosol 63.7 91.87
CDX94927 Canola cytosol 10.6 78.99
CDY02120 Canola cytosol, nucleus, plasma membrane 57.84 77.85
AT5G61740.1 Thale cress plasma membrane 79.37 77.45
CDY31786 Canola cytosol, nucleus, plasma membrane 57.38 77.12
CDY62599 Canola plasma membrane 72.72 74.22
CDY23798 Canola nucleus, peroxisome, plasma membrane 29.43 67.97
CDY23043 Canola cytosol, mitochondrion 39.23 67.97
CDY24156 Canola plasma membrane 68.09 64.12
CDY36930 Canola plasma membrane 67.87 63.91
CDX68441 Canola plasma membrane 67.64 63.69
CDX83025 Canola plasma membrane 67.31 63.38
CDY24158 Canola plasma membrane 65.5 62.74
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 62.34 62.42
CDX77421 Canola plasma membrane 65.16 61.82
CDY39546 Canola plasma membrane 65.05 61.71
KRH54520 Soybean plasma membrane, plastid 55.92 61.46
CDX68440 Canola cytosol, mitochondrion 9.36 59.71
CDY36931 Canola plastid 62.46 59.51
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 42.28 58.78
CDY24157 Canola plastid 62.68 58.46
KRH63384 Soybean plasma membrane 47.8 58.24
Solyc03g113040.2.1 Tomato plastid 61.22 57.46
Solyc03g113060.2.1 Tomato extracellular 60.32 56.67
KRH56933 Soybean plasma membrane, plastid 59.86 55.95
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 30.67 55.4
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 11.16 55.31
TraesCS7A01G367700.1 Wheat plasma membrane 35.4 55.28
KRH03450 Soybean plasma membrane, plastid 59.41 55.24
CDY21797 Canola plasma membrane 56.14 55.09
CDX77874 Canola plasma membrane 50.85 54.4
Solyc06g070950.1.1 Tomato plasma membrane 52.54 52.3
TraesCS1B01G356200.1 Wheat plasma membrane 55.81 52.0
TraesCS1A01G343000.1 Wheat plasma membrane 55.69 51.84
TraesCS1D01G345200.1 Wheat plasma membrane 55.58 51.79
CDY24573 Canola plasma membrane 9.24 51.57
HORVU4Hr1G087670.8 Barley mitochondrion 55.47 51.25
Os08t0398300-01 Rice plasma membrane 55.24 51.2
HORVU1Hr1G075620.5 Barley plasma membrane 54.9 51.05
KXG25097 Sorghum plasma membrane 54.9 50.84
Zm00001d050259_P002 Maize plasma membrane 55.02 49.59
TraesCS5D01G195700.1 Wheat plasma membrane 52.76 49.47
OQU89360 Sorghum plasma membrane 52.76 49.37
TraesCS4B01G365000.1 Wheat plasma membrane 54.68 49.29
TraesCS5A01G193200.1 Wheat plasma membrane 52.42 49.15
Zm00001d020208_P003 Maize plasma membrane 52.31 48.95
TraesCSU01G138200.1 Wheat plasma membrane 54.68 48.6
TraesCS5A01G534100.3 Wheat cytosol 55.13 48.42
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 23.22 48.36
Os06t0589300-01 Rice plasma membrane 51.52 48.16
TraesCS3D01G368700.2 Wheat plasma membrane 52.42 48.04
TraesCS7B01G260800.1 Wheat plastid 51.52 47.8
TraesCS5B01G188600.1 Wheat plasma membrane 51.07 47.68
TraesCS7D01G355100.1 Wheat plastid 51.3 47.64
HORVU5Hr1G056930.20 Barley plasma membrane 52.31 47.49
EER89983 Sorghum plastid 50.62 47.06
Zm00001d036927_P001 Maize plasma membrane, plastid 50.51 46.42
CDX68439 Canola nucleus 8.23 46.2
CDY23799 Canola cytosol, peroxisome, plasma membrane 10.48 45.59
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 50.85 45.51
GSMUA_Achr7P23890_001 Banana plasma membrane 58.74 44.53
GSMUA_Achr3P20510_001 Banana plasma membrane 57.61 43.56
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 7.1 37.5
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 6.99 36.9
Solyc06g070930.2.1 Tomato plastid 11.05 35.77
HORVU4Hr1G039510.1 Barley cytosol 6.65 35.12
CDY62594 Canola cytosol 12.85 24.95
CDY64180 Canola plasma membrane 17.02 24.08
CDY16404 Canola plastid 8.91 24.01
CDY24159 Canola golgi, mitochondrion 25.25 23.91
CDY01873 Canola cytosol 6.99 23.48
CDX96058 Canola cytosol 6.99 23.48
CDY57805 Canola plastid 8.68 23.4
CDY58413 Canola cytosol, plastid 7.22 23.36
CDX69605 Canola plastid 7.22 23.36
CDY36933 Canola golgi, mitochondrion 25.03 23.01
CDY02116 Canola plasma membrane 21.65 22.86
CDY23042 Canola plasma membrane 24.01 22.73
CDY23040 Canola plasma membrane 24.35 22.64
CDY23800 Canola plasma membrane 23.22 22.51
CDY52820 Canola cytosol, nucleus, plasma membrane 22.21 22.44
CDY02118 Canola plasma membrane 24.13 21.51
CDX68434 Canola plasma membrane 17.02 21.27
CDX68435 Canola mitochondrion, plastid 6.09 20.69
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 7.89 19.18
CDX68436 Canola plasma membrane 6.31 19.05
CDY62596 Canola cytosol, plasma membrane, vacuole 6.31 18.24
CDY39288 Canola cytosol 3.61 16.16
CDY35403 Canola mitochondrion, plasma membrane 21.31 10.16
CDY22536 Canola mitochondrion, plasma membrane 21.2 10.15
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078EN41InterPro:AAA+_ATPaseInterPro:ABCAInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDY02114ProteinID:CDY02114ProteinID:CDY02114.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00113506001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005ScanProsite:PS00211
PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelix
UniParc:UPI0004EE47DFSEG:seg::::
Description
BnaA03g40530D
Coordinates
chrLK031932:-:215469..219640
Molecular Weight (calculated)
98148.3 Da
IEP (calculated)
8.250
GRAVY (calculated)
0.013
Length
887 amino acids
Sequence
(BLAST)
001: MADHGQASFW TQANALLRKN LTYQRKHIWT NVRLVLVPLF LCLLLLSIQL LLEAVMNKVL DMAKCGSKDA PNGDYCPIPN PPLLPPMLHI PEPESRAVKA
101: GFFPYSDLPD LSCRKTKTCP LTMLLTGKNQ SLGKALSGTM FGGSFAVNTS DLLPSLADNV LGTTLGAGMD SFRDPGITSG FPIYSIQPQC NANSTWPLSL
201: GKTRTEVKCV QGLCLWRNSS AEVNEEIFKG SWRGNPERMT NEIAAAYDLL STDGKNLDVN IWYNATYYSG GPQNKPLVRV PRLISLVSSA YLKFLKGPGT
301: KILFEFVKEV PKNSTKSNSD IASLFGPLFF TWVVLLLFPV IVTSLVYEKQ ERLRIIMKMH GLGDVIGLNY FRLNSYSVQF VFYFIYLNLQ IAIAFLVSTM
401: FSKVKTVTVV SYIMVFGTGL LGNFLFAQLL DSPSFPEKWI IVLELFPGFS LFRGLHEFAQ AAFHGNGMKW GDLSESGMDK VFYIMLVEWF VTLTVAYFVD
501: QVLTSGKSPC LFTKKSTTSL PDPSVESQSS DNVLIDMEKA DVTHEAETNQ REKVELMRIE GSTGHAIVCD NLKKVYPGRD GNPPKIAVRG MYLDVPSGEC
601: FGMLGPNGAG KTSFINMMTG LLKPTSGTAL VQGWDICKDM NKVYTSMGVC PQHDLLWETL TGREHLLFYG RLKNIKGPAL KQAVEESLKS VSLFDGGVAD
701: KPAGKYSGGM KRRLSVAISL IGNPKVVYMD EPSTGLDPAS RKNLWTVIQR AKQDTAIILT THSMEEAEFL CDRLGIFVDG GLQCIGNPRE LKGRYGGSYV
801: FTMTTSSEHE EIVERLVQNI SPNAKKVYHL SGTQKFEIPK QEVMISDLFL MVESAKSKFT VFAWGLADTT LEDVFFKVAT SAQASLS
Best Arabidopsis Sequence Match ( AT5G61740.1 )
(BLAST)
001: MADPSQASFW AQANALLRKN LTYQRRHIWT NIRLVLVPLL LCLFLLGIQL LLDVVVNKAA DLTKCGSQDD FSIGDCPIPN PPLLPPLLQI PEPESRAVSG
101: GFFSYNDLPD KSCRKTGTCP VTILLTGNNH SLGQALSGNM FGGSFAVNSS DLLSSLAYNV LGSTLALGTN NYADPGIESD FPIYSIQSQC SPNSTWPLSF
201: GKIHTAVTCL QGLSLWRNNS VEVNDELFKG NWKGNPERMT NEIAAAYDLL NTDRNNFDVT IWYNSTNIDD PSRAPLVRVP RLLNLVSNAY LKFLKGPGTR
301: ILFEFVKEVP KHQTKFNLDI ASMLGPLFFT WVVLLLFPVI LTSLVYEKQE RLRIIMKMHG LGIGPYWMIS YAYFLTLSMF YVISLVIFGS AIGLRYFRLN
401: DYSVQFIFYF IFVNLQISFA FLASSIFSKV KTATVVAYTL VFASGLLGMF LFGELLESPT FPEKGILALE LYPGFSLFRG LYEFAQYASR GNGMKWKDLK
501: ESGMDKLFYL MSVEWFVILI VAYSIDLLSS SGRSPFVFFK KSSSLPSPSV QRQNSENVLI DMEKTDVTQE REKVEKLRKE GTTGHAIVCD NLKKVYPGSD
601: GNPPKLAVRG LYLDVPSGEC FGMLGPNGAG KTSFINMMTG LLKPTSGTAL VQGLDICKDM NKVYTSMGVC PQHDLLWGTL TGREHLLFYG RLKNIKGSAL
701: MQAVEESLKS VSLFDGGVAD KPAGKYSGGM KRRLSVAISL IGNPKVVYMD EPSTGLDPAS RKDLWTVIQR AKQNTAIILT THSMEEAEFL CDRLGIFVDG
801: GLQCVGNPKE LKGRYGGSYV FTMTTSVEHE EKVERMVKHI SPNSKRVYHL AGTQKFEIPK QEVMIADVFF MVEKVKSKFT VFAWGLADTT LEDVFFKVAT
901: TAQAFNSLS
Arabidopsis Description
ABCA10ABC transporter A family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLT4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.