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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • plastid 2
  • extracellular 3
  • plasma membrane 4
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:extracellular
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400083071 Potato plasma membrane 96.71 65.99
CDX94927 Canola cytosol 12.07 64.71
TraesCS7A01G367700.1 Wheat plasma membrane 51.72 58.1
VIT_12s0055g00730.t01 Wine grape extracellular 11.13 55.91
CDY23043 Canola cytosol, mitochondrion 44.83 55.86
CDY02120 Canola cytosol, nucleus, plasma membrane 57.37 55.54
CDY31786 Canola cytosol, nucleus, plasma membrane 57.05 55.15
Bra018114.1-P Field mustard cytosol, peroxisome, plasma membrane 53.6 54.37
KRH54520 Soybean plasma membrane, plastid 66.77 52.79
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 37.77 49.08
CDX68440 Canola cytosol, mitochondrion 10.66 48.92
Solyc03g113040.2.1 Tomato plastid 68.34 46.14
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 12.07 45.83
VIT_17s0000g05860.t01 Wine grape plasma membrane, plastid 67.4 45.31
CDY23798 Canola nucleus, peroxisome, plasma membrane 27.12 45.05
Solyc03g113060.2.1 Tomato extracellular 66.46 44.92
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 62.23 44.81
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 11.6 44.05
KRH56933 Soybean plasma membrane, plastid 65.52 44.05
AT3G47790.1 Thale cress plasma membrane 62.07 43.95
Bra019513.1-P Field mustard plasma membrane 61.13 43.67
CDX68439 Canola nucleus 10.81 43.67
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 29.15 43.66
Bra033786.1-P Field mustard cytosol, mitochondrion, nucleus 20.38 43.62
KRH03450 Soybean plasma membrane, plastid 65.2 43.61
HORVU4Hr1G039510.1 Barley cytosol 11.44 43.45
CDY21797 Canola plasma membrane 61.13 43.14
Bra018115.1-P Field mustard plasma membrane 62.38 42.98
CDY24158 Canola plasma membrane 62.38 42.98
AT5G61700.1 Thale cress plasma membrane 61.6 42.86
AT3G47740.1 Thale cress plasma membrane 62.38 42.7
AT3G47780.1 Thale cress plasma membrane 62.54 42.67
AT5G61740.1 Thale cress plasma membrane 60.66 42.57
Solyc06g070950.1.1 Tomato plasma membrane 59.4 42.54
AT3G47760.3 Thale cress plasma membrane 62.23 42.41
CDY62599 Canola plasma membrane 57.68 42.35
CDY02114 Canola plasma membrane 58.78 42.28
CDY36930 Canola plasma membrane 62.38 42.25
Bra018113.1-P Field mustard plasma membrane 62.38 42.25
CDY24156 Canola plasma membrane 62.23 42.14
CDX83025 Canola plasma membrane 62.07 42.04
CDX68441 Canola plasma membrane 61.91 41.93
Bra033785.1-P Field mustard plasma membrane 61.91 41.93
TraesCS1D01G345200.1 Wheat plasma membrane 62.38 41.81
AT3G47770.2 Thale cress endoplasmic reticulum, golgi, plasma membrane, plastid 60.66 41.79
TraesCS1A01G343000.1 Wheat plasma membrane 62.38 41.76
Bra012931.1-P Field mustard cytosol, peroxisome, plasma membrane 38.71 41.72
TraesCS1B01G356200.1 Wheat plasma membrane 62.23 41.7
AT3G47750.1 Thale cress mitochondrion, plasma membrane 61.13 41.62
HORVU1Hr1G075620.5 Barley plasma membrane 62.23 41.61
CDY23039 Canola plasma membrane 57.84 41.55
CDX77421 Canola plasma membrane 60.81 41.5
HORVU4Hr1G087670.8 Barley mitochondrion 62.38 41.46
KXG25097 Sorghum plasma membrane 62.07 41.34
CDX77874 Canola plasma membrane 53.6 41.25
Os08t0398300-01 Rice plasma membrane 61.76 41.17
CDY39546 Canola plasma membrane 60.19 41.07
Bra012927.1-P Field mustard cytosol 39.5 40.98
TraesCS5D01G195700.1 Wheat plasma membrane 60.5 40.8
Bra015049.1-P Field mustard plasma membrane 57.05 40.76
TraesCS5A01G193200.1 Wheat plasma membrane 60.34 40.7
OQU89360 Sorghum plasma membrane 60.03 40.4
TraesCS4B01G365000.1 Wheat plasma membrane 62.07 40.24
TraesCS5B01G188600.1 Wheat plasma membrane 59.87 40.21
Zm00001d020208_P003 Maize plasma membrane 59.72 40.19
CDY36931 Canola plastid 58.46 40.06
Zm00001d050259_P002 Maize plasma membrane 61.76 40.04
CDY24157 Canola plastid 59.25 39.75
VIT_18s0041g02240.t01 Wine grape plasma membrane 45.77 39.67
TraesCSU01G138200.1 Wheat plasma membrane 61.76 39.48
TraesCS5A01G534100.3 Wheat cytosol 61.91 39.11
KRH63384 Soybean plasma membrane 44.04 38.6
HORVU5Hr1G056930.20 Barley plasma membrane 59.09 38.59
Os06t0589300-01 Rice plasma membrane 57.05 38.36
TraesCS3D01G368700.2 Wheat plasma membrane 57.84 38.12
TraesCS7B01G260800.1 Wheat plastid 56.74 37.87
TraesCS7D01G355100.1 Wheat plastid 56.58 37.8
EER89983 Sorghum plastid 56.27 37.63
Zm00001d036927_P001 Maize plasma membrane, plastid 55.8 36.89
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 56.43 36.33
GSMUA_Achr7P23890_001 Banana plasma membrane 65.05 35.47
GSMUA_Achr3P20510_001 Banana plasma membrane 62.07 33.76
Solyc03g113080.2.1 Tomato cytosol 15.67 27.93
Solyc02g068180.2.1 Tomato plastid 10.81 25.18
Solyc06g068600.2.1 Tomato cytosol 6.9 23.78
Solyc03g117810.2.1 Tomato cytosol 9.56 23.19
Solyc04g056650.2.1 Tomato plastid 11.13 20.29
Solyc06g070940.2.1 Tomato plasma membrane 29.31 19.83
Solyc06g070960.1.1 Tomato plasma membrane 28.53 19.65
Solyc03g113070.2.1 Tomato plasma membrane 12.85 14.24
Solyc04g015970.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 26.33 8.8
Solyc06g070930.2.1 Tomato plastid 0.63 1.46
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABCAInterPro:ABC_transporter-likeInterPro:ABC_transporter_CS
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006810GO:GO:0006869GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0043231
GO:GO:0055085InterPro:IPR003439UniProt:K4C8G5InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF12698
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382SUPFAM:SSF52540
EnsemblPlantsGene:Solyc06g070920.2EnsemblPlants:Solyc06g070920.2.1TMHMM:TMhelixUniParc:UPI0002766D34::
Description
No Description!
Coordinates
chr6:-:43554837..43558801
Molecular Weight (calculated)
70793.1 Da
IEP (calculated)
6.144
GRAVY (calculated)
0.137
Length
638 amino acids
Sequence
(BLAST)
001: MVNLASNTFL QNLLGPSFNI LFDNIKEMPK HGSFRMSEIS SQMGPILFSW VILQLFPVAF VALVYEKQQN LRIMMKMHGL KDGPYWTITY AYFLLISSLY
101: MFGFVAFGSI LGLSIFLENS FGIQFVFYFI YVNLQIACAF LLAGFFKDVK TATVMGYLVV FASGLLGSFF FANFLSGASV SEVWIIVMEL YPGFALYRGL
201: FEFGEYSKSG LYTGESGGMK WANLSDPGNG MKEVMIIMLV EWIVVLLVAF YLDQINSSGE SPLFFLENSR KKKTLSTMNL LEKKDSGVCL EMEKEDVAQE
301: REKVEQMLAG STSGYPIVVD NLKKVYPGID GNPDKYAVRG LSLAVPEGEC LGMLGPNGAG KTSFISMMIG LTKPSSGSAF VDGLNINTEM DKVYTVMGVC
401: PQHDLLWDTL TGREHLLFYG RLKNLKGEVL HRAVEDSLKS LNLFNGGVAD KQSGRYSGGM KRRLSVAISL IGNPKVVYLD EPSTGLDPAS RDTLWTVVKN
501: ARKGRAIILT THSMEEADYL CDRLGIFVDG SLQCIANSSE LKTRYGGSYV LAITTSADNE VEVEKMVRQI CPNANKVYHL SGTQKFELPK HESKIADVFQ
601: LVENAKSRFP IYAWGMADTT LEDVFIKVAS CAQSFNEA
Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)
001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS
Arabidopsis Description
ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.