Factsheet for TraesCS1D01G345200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G343000.1	Wheat	plasma membrane	98.53	98.43
TraesCS1B01G356200.1	Wheat	plasma membrane	97.37	97.37
HORVU1Hr1G075620.5	Barley	plasma membrane	94.12	93.92
Os08t0398300-01	Rice	plasma membrane	81.83	81.4
KXG25097	Sorghum	plasma membrane	81.83	81.32
Zm00001d050259_P002	Maize	plasma membrane	82.04	79.37
TraesCS3D01G368700.2	Wheat	plasma membrane	80.15	78.82
TraesCS5D01G195700.1	Wheat	plasma membrane	72.37	72.83
CDX94927	Canola	cytosol	9.03	72.27
KRH54520	Soybean	plasma membrane, plastid	57.46	67.78
PGSC0003DMT400083070	Potato	cytosol	8.72	66.94
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	66.07	66.28
VIT_12s0055g00730.t01	Wine grape	extracellular	8.72	65.35
Solyc03g113040.2.1	Tomato	plastid	63.87	64.34
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	33.09	64.15
KRH63384	Soybean	plasma membrane	48.74	63.74
CDY02120	Canola	cytosol, nucleus, plasma membrane	43.8	63.28
CDY31786	Canola	cytosol, nucleus, plasma membrane	43.28	62.42
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	41.81	62.38
Solyc03g113060.2.1	Tomato	extracellular	61.24	61.76
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.34	61.05
AT3G47790.1	Thale cress	plasma membrane	56.41	59.6
Bra018113.1-P	Field mustard	plasma membrane	58.72	59.34
CDX83025	Canola	plasma membrane	58.72	59.34
AT3G47780.1	Thale cress	plasma membrane	58.19	59.25
Bra033785.1-P	Field mustard	plasma membrane	58.61	59.24
CDY24156	Canola	plasma membrane	58.4	59.02
CDY36930	Canola	plasma membrane	58.4	59.02
CDX68441	Canola	plasma membrane	58.19	58.81
KRH56933	Soybean	plasma membrane, plastid	58.61	58.8
Bra019513.1-P	Field mustard	plasma membrane	54.83	58.45
KRH03450	Soybean	plasma membrane, plastid	58.4	58.28
CDY24158	Canola	plasma membrane	56.3	57.88
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	53.78	57.79
CDY21797	Canola	plasma membrane	54.73	57.63
CDY23043	Canola	cytosol, mitochondrion	30.99	57.62
CDX68440	Canola	cytosol, mitochondrion	8.4	57.55
Bra018115.1-P	Field mustard	plasma membrane	55.46	57.02
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	55.78	56.67
VIT_07s0095g00600.t01	Wine grape	extracellular	4.1	56.52
CDX77874	Canola	plasma membrane	49.16	56.45
TraesCS1D01G345300.1	Wheat	mitochondrion, plasma membrane	55.99	56.28
CDY62599	Canola	plasma membrane	51.26	56.16
CDX77421	Canola	plasma membrane	55.15	56.15
AT3G47740.1	Thale cress	plasma membrane	54.83	56.01
AT5G61740.1	Thale cress	plasma membrane	53.47	56.0
AT5G61700.1	Thale cress	plasma membrane	53.78	55.83
CDY39546	Canola	plasma membrane	54.62	55.62
CDY02114	Canola	plasma membrane	51.79	55.58
GSMUA_Achr7P23890_001	Banana	plasma membrane	68.28	55.56
AT3G47760.3	Thale cress	plasma membrane	54.62	55.56
Bra015049.1-P	Field mustard	plasma membrane	52.1	55.54
Solyc06g070950.1.1	Tomato	plasma membrane	51.89	55.44
CDY23039	Canola	plasma membrane	51.37	55.07
TraesCS7D01G355100.1	Wheat	plastid	55.15	54.97
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	53.36	54.86
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.82	54.39
PGSC0003DMT400083071	Potato	plasma membrane	53.26	54.22
CDY36931	Canola	plastid	52.52	53.71
CDY24157	Canola	plastid	53.26	53.31
CDY23798	Canola	nucleus, peroxisome, plasma membrane	21.32	52.86
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	16.39	52.35
GSMUA_Achr3P20510_001	Banana	plasma membrane	63.34	51.41
TraesCS6D01G170100.1	Wheat	plastid	49.47	50.37
Bra012927.1-P	Field mustard	cytosol	32.35	50.08
VIT_18s0041g02240.t01	Wine grape	plasma membrane	36.34	47.01
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	21.01	46.95
CDX68439	Canola	nucleus	7.04	42.41
Solyc06g070930.2.1	Tomato	plastid	10.82	37.59
TraesCS3D01G393600.2	Wheat	plastid	7.35	25.36
TraesCS1D01G345100.2	Wheat	mitochondrion, plasma membrane, plastid	24.16	23.83
TraesCS7D01G420100.1	Wheat	cytosol, golgi, mitochondrion	6.2	22.43
TraesCS4D01G332100.1	Wheat	cytosol	6.41	21.33
TraesCS5D01G377300.1	Wheat	cytosol, peroxisome, plastid	7.04	16.96

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF12698	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G345200	EnsemblPlants:TraesCS1D01G345200.1	TIGR:cd03263	SEG:seg

Description

No Description!

Coordinates

chr1D:+:433363739..433368831

Molecular Weight (calculated)

105401.0 Da

IEP (calculated)

8.619

GRAVY (calculated)

0.045

Length

952 amino acids

Sequence
(BLAST)

001: MDSSTGSRGP AGFSTQANAL LRKNLCFQKR NLKTNVCITL FPILLCVLLV LLQGAIDREI DKPKYRCGCA CVDAAADGSC RRTECGVQHS TLDQVASCPI
101: PTPPRWPALV QLPTPEARAI STASQPFDGL PGQTCRDAGS CPAAFLVTGA NRSLAESLSG QLFPALSSPL NFTDYLGALS KIVPGSDTTP ESRQLLEPAF
201: TPGNTLYIVQ PQCRSNLSQT VSVNAGIIPL RLDVDCIQGL TLWRESESIV NDELFRGYRQ QRESGREKAN EFAAGYNFLN TNKDSLDISI WFNSTYSNNT
301: AFTPIALLRV PRLVNMASNA YIKFLRGSGV EMLLEYVKDM PKVGTKLKFD LSSLLGALFF TWIVELLFPV VLTYLVYEKQ QKLKIMMKMH GLKDGPYWMI
401: TYTYFFALSA VYMILFIIFG SVIGLRFFTA NNYSIQIVFY FIYINLQIAL AFFAASFFSS VKIATVVGYI YVFGSGLLGA FLLRFFVEDN GFPKGWIVVM
501: EIIPGFSLYR GLYEFGQYAF SGTAMGTSGM EWTNLSDPVN GMRTVLIIMV IEWAILLPLA FYLDQVSSLG GGLRKRLLIS LKCFKKRAAS FRRYSFGRQG
601: SKVVVEMENP DTTQEREVVE QLLLEPSANH AIISDNLTKV YHGKDGNPDK LAVRGLSLAL PKGQCFGMLG PNGAGKTSFI SMMIGLIPPT SGTAYVHGMD
701: IRTDMNEIYT NMGVCPQHDL LWETLTGREH LLFYGRLKNL KGAELLKATD DSLKSVNLFR GGVGDKQVGK YSGGMKRRLS VAISLIGDPK VVFMDEPSTG
801: LDPASRNNLW SVVKEAKKNR AIILTTHSME EAEVLCDRLG IFVDGGFQCI GNPKELKARY GGTYVFTMTT SSEHEQEVEQ LVRRLSPNAN RIYHISGTQK
901: FELPKQEVKI ADVFNEVENA KGRFSIHAWG LADTTLEDVF IKVAKGAQAF NV

Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)

001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS

Arabidopsis Description

ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.