Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G336400.1 | Wheat | cytosol, plastid | 90.21 | 90.85 |
| Zm00001d014611_P001 | Maize | cytosol, mitochondrion, plasma membrane | 58.39 | 88.83 |
| TraesCS7D01G420100.1 | Wheat | cytosol, golgi, mitochondrion | 79.72 | 86.69 |
| EER90300 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion | 77.97 | 83.21 |
| Solyc06g068600.2.1 | Tomato | cytosol | 44.06 | 68.11 |
| CDX96058 | Canola | cytosol | 61.19 | 66.29 |
| CDY01873 | Canola | cytosol | 61.19 | 66.29 |
| Bra004271.1-P | Field mustard | cytosol | 60.84 | 65.91 |
| AT1G67940.1 | Thale cress | cytosol | 60.14 | 65.4 |
| Os06t0695800-01 | Rice | unclear | 77.97 | 64.45 |
| VIT_11s0052g00540.t01 | Wine grape | cytosol | 59.79 | 63.81 |
| Solyc03g117810.2.1 | Tomato | cytosol | 56.99 | 61.98 |
| PGSC0003DMT400036875 | Potato | cytosol | 56.29 | 61.22 |
| Os10t0434900-00 | Rice | cytosol, mitochondrion | 28.67 | 61.19 |
| KRH41857 | Soybean | plasma membrane | 55.59 | 61.15 |
| GSMUA_Achr7P19550_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 65.38 | 60.32 |
| PGSC0003DMT400074438 | Potato | extracellular | 57.34 | 58.57 |
| TraesCS3D01G393600.2 | Wheat | plastid | 24.83 | 25.72 |
| TraesCS5D01G377300.1 | Wheat | cytosol, peroxisome, plastid | 24.48 | 17.72 |
| TraesCS5D01G195700.1 | Wheat | plasma membrane | 21.33 | 6.45 |
| TraesCS1D01G345300.1 | Wheat | mitochondrion, plasma membrane | 21.33 | 6.44 |
| TraesCS6D01G170100.1 | Wheat | plastid | 20.98 | 6.42 |
| TraesCS1D01G345200.1 | Wheat | plasma membrane | 21.33 | 6.41 |
| TraesCS3D01G368700.2 | Wheat | plasma membrane | 20.63 | 6.1 |
| TraesCS7D01G355100.1 | Wheat | plastid | 18.88 | 5.65 |
| TraesCS1D01G345100.2 | Wheat | mitochondrion, plasma membrane, plastid | 18.18 | 5.39 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005315 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0035435 | InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 | ScanProsite:PS00211 | PFscan:PS50893 |
| PANTHER:PTHR43423 | PANTHER:PTHR43423:SF1 | InterPro:Phosp_transpt1 | SMART:SM00382 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS4D01G332100 |
| EnsemblPlants:TraesCS4D01G332100.1 | TIGR:cd03260 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4D:+:489740917..489742775
Molecular Weight (calculated)
30456.8 Da
IEP (calculated)
6.796
GRAVY (calculated)
-0.050
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSASGNPPE KVRDVCMTPT SSRTALHAVH ARTDDTSREH EHLLDVADGP KIRVRGLRRR SEASGEEVLR GVDLDVPRGA VMGVIGPSGG GKSTLLRALN
101: RLWEPAPGAV ALDGADICGI DVLALRRRVG MLFQLPAMFD GTVADNVRYG PQLRGKKLTD AEVEGLLSLA DLDPAMSSRP ASELSVGQAQ RVALARTLAN
201: GPEVLLLDEP TSALDPISTQ NIAEAIVRLK ETRGLTTVIV SHSVKQIQRV ADLVCLVVDG EVVEVLAASD LARAKHPVAR RFLELS
101: RLWEPAPGAV ALDGADICGI DVLALRRRVG MLFQLPAMFD GTVADNVRYG PQLRGKKLTD AEVEGLLSLA DLDPAMSSRP ASELSVGQAQ RVALARTLAN
201: GPEVLLLDEP TSALDPISTQ NIAEAIVRLK ETRGLTTVIV SHSVKQIQRV ADLVCLVVDG EVVEVLAASD LARAKHPVAR RFLELS
001: MPSLWSNESD GSLREHLVDV VVSGSEPKIR VHDLTRVADD GSRILKGVTI DIPKGMIVGV IGPSGSGKST FLRSLNRLWE PPESTVFLDG EDITNVDVIA
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS
Arabidopsis Description
ABCI17Sensitive to aluminum rhizotoxicity 1 [Source:UniProtKB/TrEMBL;Acc:D6RVY5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.