Factsheet for TraesCS4B01G336400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G332100.1	Wheat	cytosol	90.85	90.21
Zm00001d014611_P001	Maize	cytosol, mitochondrion, plasma membrane	59.51	89.89
TraesCS7B01G327900.1	Wheat	cytosol, golgi, mitochondrion	80.99	88.46
EER90300	Sorghum	cytosol, endoplasmic reticulum, mitochondrion	79.58	84.33
TraesCS4B01G315100.1	Wheat	cytosol	74.3	80.23
Solyc06g068600.2.1	Tomato	cytosol	45.42	69.73
CDX96058	Canola	cytosol	61.97	66.67
Bra004271.1-P	Field mustard	cytosol	61.62	66.29
CDY01873	Canola	cytosol	61.62	66.29
AT1G67940.1	Thale cress	cytosol	61.27	66.16
VIT_11s0052g00540.t01	Wine grape	cytosol	61.62	65.3
Os06t0695800-01	Rice	unclear	78.87	64.74
Solyc03g117810.2.1	Tomato	cytosol	59.15	63.88
PGSC0003DMT400036875	Potato	cytosol	58.8	63.5
KRH41857	Soybean	plasma membrane	57.39	62.69
Os10t0434900-00	Rice	cytosol, mitochondrion	29.58	62.69
GSMUA_Achr7P19550_001	Banana	endoplasmic reticulum, extracellular, vacuole	67.25	61.61
PGSC0003DMT400074438	Potato	extracellular	60.21	61.07
TraesCS3B01G432400.1	Wheat	plastid	25.7	26.64
TraesCS5B01G369900.1	Wheat	plastid	25.7	20.45
TraesCS6B01G211300.1	Wheat	cytosol, peroxisome, plasma membrane	21.48	7.68
TraesCS1B01G356300.1	Wheat	mitochondrion	21.48	6.46
TraesCS5B01G188600.1	Wheat	plasma membrane	21.48	6.42
TraesCS1B01G356200.1	Wheat	plasma membrane	21.48	6.41
TraesCS4B01G365000.1	Wheat	plasma membrane	20.77	6.0
TraesCS7B01G260800.1	Wheat	plastid	19.37	5.75
TraesCS1B01G356100.2	Wheat	plasma membrane	17.96	5.29

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005315	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887
GO:GO:0035435	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR43423	PANTHER:PTHR43423:SF1	InterPro:Phosp_transpt1	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4B01G336400
EnsemblPlants:TraesCS4B01G336400.1	TIGR:cd03260	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:+:628660074..628661719

Molecular Weight (calculated)

30167.6 Da

IEP (calculated)

6.942

GRAVY (calculated)

0.021

Length

284 amino acids

Sequence
(BLAST)

001: MGSASGDSPL KIRDICMVPT SSRTALHAVR ARTDDSSREH LLDVADGPKI RVRGLSRRSE ATGEAILRGV DLDVPRGVVM GVIGPSGSGK STLLRALNRL
101: WEPAPGAVAL DGADICGMDV LALRRKVGML FQLPVMFDGT VADNVRYGPQ LRGKKLTEAE VEGLLRLADL DPARSSRPAS ELSVGQAQRV ALARTLANDP
201: EVLLLDEPTS ALDPISTQNI EEAIVRLKET GGLTTVIVSH SVKQIQRVAD LVCLVVDGEV VEVLAPSGLA GAKHPVARRF LELS

Best Arabidopsis Sequence Match ( AT1G67940.1 )
(BLAST)

001: MPSLWSNESD GSLREHLVDV VVSGSEPKIR VHDLTRVADD GSRILKGVTI DIPKGMIVGV IGPSGSGKST FLRSLNRLWE PPESTVFLDG EDITNVDVIA
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS

Arabidopsis Description

ABCI17Sensitive to aluminum rhizotoxicity 1 [Source:UniProtKB/TrEMBL;Acc:D6RVY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.