Factsheet for TraesCS1B01G356200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G343000.1	Wheat	plasma membrane	98.0	97.9
TraesCS1D01G345200.1	Wheat	plasma membrane	97.37	97.37
HORVU1Hr1G075620.5	Barley	plasma membrane	94.01	93.82
TraesCS4B01G365000.1	Wheat	plasma membrane	86.66	83.84
Os08t0398300-01	Rice	plasma membrane	80.99	80.56
KXG25097	Sorghum	plasma membrane	80.99	80.48
Zm00001d050259_P002	Maize	plasma membrane	81.09	78.46
CDX94927	Canola	cytosol	9.03	72.27
TraesCS5B01G188600.1	Wheat	plasma membrane	70.06	70.21
KRH54520	Soybean	plasma membrane, plastid	57.14	67.41
PGSC0003DMT400083070	Potato	cytosol	8.72	66.94
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	65.76	65.96
VIT_12s0055g00730.t01	Wine grape	extracellular	8.72	65.35
Solyc03g113040.2.1	Tomato	plastid	63.45	63.92
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	32.88	63.75
KRH63384	Soybean	plasma membrane	48.63	63.6
CDY02120	Canola	cytosol, nucleus, plasma membrane	43.8	63.28
CDY31786	Canola	cytosol, nucleus, plasma membrane	43.28	62.42
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	41.7	62.23
Solyc03g113060.2.1	Tomato	extracellular	60.92	61.44
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.02	60.57
AT3G47780.1	Thale cress	plasma membrane	58.09	59.14
Bra018113.1-P	Field mustard	plasma membrane	58.4	59.02
AT3G47790.1	Thale cress	plasma membrane	55.78	58.93
KRH56933	Soybean	plasma membrane, plastid	58.61	58.8
CDX83025	Canola	plasma membrane	58.09	58.7
CDY36930	Canola	plasma membrane	58.09	58.7
Bra033785.1-P	Field mustard	plasma membrane	57.98	58.6
CDY24156	Canola	plasma membrane	57.98	58.6
CDX68441	Canola	plasma membrane	57.67	58.28
KRH03450	Soybean	plasma membrane, plastid	58.09	57.97
CDY23043	Canola	cytosol, mitochondrion	31.09	57.81
Bra019513.1-P	Field mustard	plasma membrane	54.2	57.78
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	53.68	57.67
CDY24158	Canola	plasma membrane	56.09	57.67
Bra018115.1-P	Field mustard	plasma membrane	55.36	56.91
CDY21797	Canola	plasma membrane	53.99	56.86
CDX68440	Canola	cytosol, mitochondrion	8.3	56.83
VIT_07s0095g00600.t01	Wine grape	extracellular	4.1	56.52
CDY62599	Canola	plasma membrane	51.47	56.39
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	55.46	56.35
AT5G61740.1	Thale cress	plasma membrane	53.47	56.0
AT5G61700.1	Thale cress	plasma membrane	53.89	55.94
TraesCS1B01G356300.1	Wheat	mitochondrion	55.36	55.83
CDY02114	Canola	plasma membrane	52.0	55.81
CDX77421	Canola	plasma membrane	54.62	55.62
CDX77874	Canola	plasma membrane	48.42	55.61
AT3G47740.1	Thale cress	plasma membrane	54.2	55.36
CDY23039	Canola	plasma membrane	51.58	55.29
AT3G47760.3	Thale cress	plasma membrane	54.31	55.23
Solyc06g070950.1.1	Tomato	plasma membrane	51.68	55.22
GSMUA_Achr7P23890_001	Banana	plasma membrane	67.86	55.21
CDY39546	Canola	plasma membrane	54.1	55.08
Bra015049.1-P	Field mustard	plasma membrane	51.58	54.98
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.93	54.56
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	52.94	54.43
TraesCS7B01G260800.1	Wheat	plastid	54.62	54.39
PGSC0003DMT400083071	Potato	plasma membrane	53.15	54.12
CDY36931	Canola	plastid	52.31	53.49
CDY24157	Canola	plastid	52.94	53.0
CDY23798	Canola	nucleus, peroxisome, plasma membrane	21.32	52.86
TraesCS6B01G211300.1	Wheat	cytosol, peroxisome, plasma membrane	43.91	52.64
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	16.28	52.01
GSMUA_Achr3P20510_001	Banana	plasma membrane	62.92	51.07
Bra012927.1-P	Field mustard	cytosol	32.46	50.24
VIT_18s0041g02240.t01	Wine grape	plasma membrane	36.24	46.88
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.8	46.48
CDX68439	Canola	nucleus	7.04	42.41
Solyc06g070930.2.1	Tomato	plastid	10.82	37.59
TraesCS3B01G432400.1	Wheat	plastid	7.04	24.45
TraesCS1B01G356100.2	Wheat	plasma membrane	24.05	23.76
TraesCS4B01G315100.1	Wheat	cytosol	6.51	23.57
TraesCS7B01G327900.1	Wheat	cytosol, golgi, mitochondrion	6.2	22.69
TraesCS4B01G336400.1	Wheat	cytosol, plastid	6.41	21.48
TraesCS5B01G369900.1	Wheat	plastid	7.04	18.77

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF12698	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G356200	EnsemblPlants:TraesCS1B01G356200.1	TIGR:cd03263
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:585326182..585331325

Molecular Weight (calculated)

105600.0 Da

IEP (calculated)

8.620

GRAVY (calculated)

0.053

Length

952 amino acids

Sequence
(BLAST)

001: MDSSTGSRGP AGFSTQANAL LRKNLCFQKR NLKTNVCITL FPILLCVLLV LLQGAIDREI DKPKYRCGCA CVDAAADGSC RRTECGAQHS TLDQVASCPI
101: PTPPRWPALV QLPTPESRAV STASQPLDGL PGQACRDAGS CPAAFLVTGS NRSLAESLSG QLFPALSSPL NFTNYLVALS KIVPGSDTTP EFRQLLEPAF
201: TPGNTLYIVQ PQCRSNLSQT VSVNAGIIPL QLNVECIQGL MLWRESESIV NDELFRGYRQ QRESGRERAN EFAAGYNFLN TNKDSLDISI WFNSTYSNNT
301: AFTEIALLRV PRLVNMASNA YIKFLRGSGV EMLLEYVKDM PKVGTKLKFD LSSLLGALFF TWIVELLFPV VLTYLVYEKQ QKLKIMMKMH GLKDGPYWMI
401: TYTYFFALSA VYMLLFIIFG SVIGLRFFTA NNYSIQIVFY FIYINLQIAL AFFAASFFSS VKIATVVGYI YVFGSGLLGA FLLRFFVEDN SFPKGWIVVM
501: EIIPGFSLYR GLYEFGQYAF SGTAMGTSGM EWTNLSDPVN GMRTVLIIMV IEWAILLPLA FYLDQVSSLS GGLRKRLLIS LKCFKKRAAS FRRYSFGRLG
601: PKVTIEMENP DTTQEREVVE QLLLEPSANH AIISDNLTKV YHGKDGNPDK LAVRGLSLAL PKGQCFGMLG PNGAGKTSFI SMMIGLIPPT SGTAYVHGMD
701: IRTDMNEIYT NMGVCPQHDL LWETLTGREH LLFYGRLKNL KGAELLKATD DSLKSVNLFR GGVGDKQVGK YSGGMKRRLS VAISLIGDPK VVFMDEPSTG
801: LDPASRNNLW SVVKEAKKNR AIILTTHSME EAEVLCDRLG IFVDGGFQCI GHPKELKARY GGTYVFTMTT SSEHEQEVEQ LVRRLSPNAN RIYHISGTQK
901: FELPKQEVKI ADVFNEVESA KSRFSIHAWG LADTTLEDVF IKVAKGAQAF NV

Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)

001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS

Arabidopsis Description

ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.