CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	57.62	94.7
KRH63056	Soybean	extracellular, plasma membrane, vacuole	9.79	92.94
CDX94927	Canola	cytosol	11.52	78.15
KRH63384	Soybean	plasma membrane	68.53	75.96
VIT_12s0055g00730.t01	Wine grape	extracellular	11.52	73.23
CDY02120	Canola	cytosol, nucleus, plasma membrane	56.75	69.5
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.9	69.16
CDY31786	Canola	cytosol, nucleus, plasma membrane	56.38	68.94
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	79.8	67.86
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	52.79	66.77
KRH56933	Soybean	plasma membrane, plastid	76.58	65.12
TraesCS7A01G367700.1	Wheat	plasma membrane	45.72	64.96
CDX68440	Canola	cytosol, mitochondrion	11.15	64.75
KRH03450	Soybean	plasma membrane, plastid	76.08	64.36
Solyc03g113040.2.1	Tomato	plastid	75.09	64.13
CDY23043	Canola	cytosol, mitochondrion	39.78	62.7
Solyc03g113060.2.1	Tomato	extracellular	72.0	61.55
AT3G47790.1	Thale cress	plasma membrane	67.78	60.71
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	65.55	59.71
CDY36930	Canola	plasma membrane	69.39	59.45
Bra018113.1-P	Field mustard	plasma membrane	69.39	59.45
AT3G47780.1	Thale cress	plasma membrane	68.77	59.36
CDY24156	Canola	plasma membrane	69.02	59.13
Bra018115.1-P	Field mustard	plasma membrane	67.41	58.75
Bra019513.1-P	Field mustard	plasma membrane	64.81	58.57
CDY24158	Canola	plasma membrane	67.16	58.53
CDX83025	Canola	plasma membrane	67.91	58.17
AT5G61700.1	Thale cress	plasma membrane	66.05	58.12
CDY23798	Canola	nucleus, peroxisome, plasma membrane	27.63	58.07
Bra033785.1-P	Field mustard	plasma membrane	67.78	58.07
CDY21797	Canola	plasma membrane	64.81	57.85
CDX77421	Canola	plasma membrane	66.67	57.54
TraesCS1A01G343000.1	Wheat	plasma membrane	67.91	57.5
TraesCS1D01G345200.1	Wheat	plasma membrane	67.78	57.46
CDX68441	Canola	plasma membrane	66.91	57.32
AT3G47760.3	Thale cress	plasma membrane	66.29	57.16
TraesCS1B01G356200.1	Wheat	plasma membrane	67.41	57.14
CDY39546	Canola	plasma membrane	66.17	57.11
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.88	57.09
CDX77874	Canola	plasma membrane	58.61	57.06
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	65.43	57.02
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	66.05	56.88
AT3G47740.1	Thale cress	plasma membrane	65.55	56.76
CDY62599	Canola	plasma membrane	60.97	56.62
Bra015049.1-P	Field mustard	plasma membrane	62.58	56.55
AT5G61740.1	Thale cress	plasma membrane	63.57	56.44
HORVU1Hr1G075620.5	Barley	plasma membrane	66.54	56.29
CDY36931	Canola	plastid	64.93	56.28
CDY02114	Canola	plasma membrane	61.46	55.92
CDY23039	Canola	plasma membrane	61.46	55.86
KXG25097	Sorghum	plasma membrane	66.29	55.85
Os08t0398300-01	Rice	plasma membrane	66.17	55.8
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	20.57	55.7
CDY24157	Canola	plastid	65.55	55.63
HORVU4Hr1G087670.8	Barley	mitochondrion	65.43	55.0
Zm00001d050259_P002	Maize	plasma membrane	65.92	54.06
TraesCS4B01G365000.1	Wheat	plasma membrane	65.68	53.86
Solyc06g070950.1.1	Tomato	plasma membrane	59.36	53.76
Zm00001d020208_P003	Maize	plasma membrane	63.07	53.69
OQU89360	Sorghum	plasma membrane	62.95	53.59
TraesCS5D01G195700.1	Wheat	plasma membrane	62.7	53.49
TraesCSU01G138200.1	Wheat	plasma membrane	66.05	53.41
Bra012927.1-P	Field mustard	cytosol	40.64	53.33
TraesCS5A01G193200.1	Wheat	plasma membrane	62.45	53.28
TraesCS5B01G188600.1	Wheat	plasma membrane	62.58	53.16
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	27.88	52.82
TraesCS5A01G534100.3	Wheat	cytosol	65.68	52.48
PGSC0003DMT400083071	Potato	plasma membrane	60.22	51.98
HORVU5Hr1G056930.20	Barley	plasma membrane	62.33	51.48
TraesCS3D01G368700.2	Wheat	plasma membrane	60.97	50.83
Os06t0589300-01	Rice	plasma membrane	59.36	50.47
VIT_18s0041g02240.t01	Wine grape	plasma membrane	45.6	50.0
TraesCS7D01G355100.1	Wheat	plastid	59.11	49.95
TraesCS7B01G260800.1	Wheat	plastid	59.11	49.9
EER89983	Sorghum	plastid	58.36	49.37
Zm00001d036927_P001	Maize	plasma membrane, plastid	58.61	49.02
GSMUA_Achr7P23890_001	Banana	plasma membrane	71.0	48.97
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	58.61	47.73
GSMUA_Achr3P20510_001	Banana	plasma membrane	67.16	46.21
CDX68439	Canola	nucleus	9.05	46.2
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	9.17	44.05
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	9.05	43.45
HORVU4Hr1G039510.1	Barley	cytosol	8.8	42.26
KRH63387	Soybean	plasma membrane, plastid	27.39	22.97
KRH54517	Soybean	plasma membrane	27.39	22.85
KRH40333	Soybean	plastid	9.54	22.32
KRH41857	Soybean	plasma membrane	7.19	22.31
KRG94568	Soybean	mitochondrion	6.69	20.69
KRH00900	Soybean	plastid	9.42	19.24
Solyc06g070930.2.1	Tomato	plastid	6.2	18.25
KRH66908	Soybean	cytosol	23.05	10.19

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EMBL:ACUP02003537	EnsemblPlantsGene:GLYMA_06G191400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810
GO:GO:0006869	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0043231	GO:GO:0055085	InterPro:IPR003439	UniProt:K7KVX1	ProteinID:KRH54519.1
EnsemblPlants:KRH54520	ProteinID:KRH54520	ProteinID:KRH54520.1	ProteinID:KRH54521.1	ProteinID:KRH54522.1	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF12698	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00029528D6	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:16821510..16831264

Molecular Weight (calculated)

90483.2 Da

IEP (calculated)

8.152

GRAVY (calculated)

-0.004

Length

807 amino acids

Sequence
(BLAST)

001: MFFTGTNQSF GEIISRNMIP SNLSSINSSD ITASLASNVV GSDSEPENTN FLEPAFFSDL PIYYLQNQCT QNSTFSVSLQ IAGISKQQEV ICAQGLRLWR
101: NSSSEVNNEL YKGYRRSNTE RQINEIAAGY DFLNSNRSIF NVSIWYNSTY KNDTGFNQIA LARIPRSVNL VSNAYLQFLL GPGTKMFFEF VKEMPKPETP
201: IKFDLASLLG GLFFTWVILQ LFPIALTSLV YEKQQNLRIM MKMHGLGDGP YWMISYGYFL AISIVYMLCF VIFGSVIGLN FFTMNDYSIQ FVFYFIYINL
301: QISLAFLLAS LFSNVKTATV LAYIGVFGTG LLAGFLFQFF VQDTSFPRGW IVVMELYPGF ALYRGLYEFS QYAFSGDALG SDGMRWSDLS DSTNGMKEVL
401: IIMFVEWLLV LLFAYYIDQV LSSGSRKSPL FFLKRFQKKP HSSFRTPSIQ RQKSKVFVQI EKPDVTQERE KVEQLLLEPT INQAIVCDNM RKVYPGRDGN
501: PEKLAVRGLS LALPQGECFG MLGPNGAGKT SFINMMIGLT KPTSGTAFVQ GLDIRTHMDG IYTSMGVCPQ HDLLWESLTG REHLLFYGRL KNLKGSALTQ
601: AVEESLKSVN LFNGGVADKQ AGKYSGGMKR RLSVAISLIG DPKVVYMDEP STGLDPASRN NLWNVVKRAK QDRAIILTTH SMEEAEVLCD RLGIFVDGGL
701: QCIGNPKELK ARYGGTYVFT MTTSMDHEKD VENLVRQLSP NANKIYHISG TQKFELPKDE VKIANVFQAV ETAKRSFTVS AWGLADTTLE DVFIKVARGA
801: QAFDTLS

Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)

001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS

Arabidopsis Description

ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.