CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 4
endoplasmic reticulum 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03450	Soybean	plasma membrane, plastid	91.78	91.3
KRH63056	Soybean	extracellular, plasma membrane, vacuole	7.17	80.0
KRH54520	Soybean	plasma membrane, plastid	65.12	76.58
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	38.67	74.75
CDX94927	Canola	cytosol	9.06	72.27
KRH63384	Soybean	plasma membrane	55.43	72.25
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	69.02	69.02
VIT_12s0055g00730.t01	Wine grape	extracellular	9.06	67.72
Solyc03g113040.2.1	Tomato	plastid	67.33	67.62
CDY02120	Canola	cytosol, nucleus, plasma membrane	46.68	67.22
CDY31786	Canola	cytosol, nucleus, plasma membrane	46.26	66.52
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	44.05	65.52
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.2	65.18
Solyc03g113060.2.1	Tomato	extracellular	64.38	64.72
CDY24156	Canola	plasma membrane	63.75	64.23
Bra018113.1-P	Field mustard	plasma membrane	63.65	64.12
CDY36930	Canola	plasma membrane	63.65	64.12
AT3G47790.1	Thale cress	plasma membrane	60.27	63.48
AT3G47780.1	Thale cress	plasma membrane	62.17	63.1
Bra033785.1-P	Field mustard	plasma membrane	62.17	62.63
CDX68441	Canola	plasma membrane	62.17	62.63
CDX83025	Canola	plasma membrane	62.17	62.63
Bra019513.1-P	Field mustard	plasma membrane	58.27	61.93
AT5G61700.1	Thale cress	plasma membrane	59.64	61.72
TraesCS7A01G367700.1	Wheat	plasma membrane	36.88	61.62
CDX77874	Canola	plasma membrane	53.74	61.52
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	57.43	61.51
CDY39546	Canola	plasma membrane	60.38	61.28
CDX77421	Canola	plasma membrane	60.17	61.07
CDY21797	Canola	plasma membrane	58.17	61.06
CDY24158	Canola	plasma membrane	59.22	60.69
CDY62599	Canola	plasma membrane	55.43	60.53
Bra015049.1-P	Field mustard	plasma membrane	56.9	60.47
KXG25097	Sorghum	plasma membrane	61.01	60.44
Bra018115.1-P	Field mustard	plasma membrane	58.9	60.37
AT3G47760.3	Thale cress	plasma membrane	59.54	60.36
AT3G47740.1	Thale cress	plasma membrane	59.11	60.19
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	59.33	60.09
CDY02114	Canola	plasma membrane	55.95	59.86
CDY23039	Canola	plasma membrane	55.95	59.8
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	58.17	59.61
AT5G61740.1	Thale cress	plasma membrane	57.01	59.52
CDY23043	Canola	cytosol, mitochondrion	31.82	58.98
Os08t0398300-01	Rice	plasma membrane	59.43	58.93
TraesCS1A01G343000.1	Wheat	plasma membrane	59.11	58.87
CDY36931	Canola	plastid	57.64	58.75
TraesCS1B01G356200.1	Wheat	plasma membrane	58.8	58.61
TraesCS1D01G345200.1	Wheat	plasma membrane	58.8	58.61
TraesCS5A01G193200.1	Wheat	plasma membrane	58.06	58.25
CDY24157	Canola	plastid	58.27	58.15
TraesCS5D01G195700.1	Wheat	plasma membrane	57.96	58.14
HORVU4Hr1G087670.8	Barley	mitochondrion	58.69	58.02
PGSC0003DMT400083071	Potato	plasma membrane	57.11	57.97
Zm00001d050259_P002	Maize	plasma membrane	60.06	57.93
HORVU1Hr1G075620.5	Barley	plasma membrane	58.17	57.86
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.04	57.77
CDY23798	Canola	nucleus, peroxisome, plasma membrane	23.29	57.55
OQU89360	Sorghum	plasma membrane	57.22	57.28
Zm00001d020208_P003	Maize	plasma membrane	57.11	57.17
TraesCS4B01G365000.1	Wheat	plasma membrane	59.01	56.91
Solyc06g070950.1.1	Tomato	plasma membrane	53.42	56.9
TraesCS5B01G188600.1	Wheat	plasma membrane	56.8	56.74
CDX68440	Canola	cytosol, mitochondrion	8.22	56.12
TraesCSU01G138200.1	Wheat	plasma membrane	59.01	56.11
Bra012927.1-P	Field mustard	cytosol	36.35	56.1
HORVU5Hr1G056930.20	Barley	plasma membrane	57.32	55.68
TraesCS5A01G534100.3	Wheat	cytosol	58.9	55.35
TraesCS7D01G355100.1	Wheat	plastid	55.22	54.87
Os06t0589300-01	Rice	plasma membrane	54.58	54.58
TraesCS7B01G260800.1	Wheat	plastid	54.9	54.5
TraesCS3D01G368700.2	Wheat	plasma membrane	55.11	54.03
EER89983	Sorghum	plastid	53.95	53.67
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	16.75	53.36
Zm00001d036927_P001	Maize	plasma membrane, plastid	53.95	53.06
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	55.01	52.67
VIT_18s0041g02240.t01	Wine grape	plasma membrane	38.99	50.27
GSMUA_Achr7P23890_001	Banana	plasma membrane	61.43	49.83
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	22.13	49.3
GSMUA_Achr3P20510_001	Banana	plasma membrane	59.75	48.34
CDX68439	Canola	nucleus	7.38	44.3
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	7.59	42.86
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	7.59	42.86
HORVU4Hr1G039510.1	Barley	cytosol	7.38	41.67
Solyc06g070930.2.1	Tomato	plastid	11.8	40.88
KRH54517	Soybean	plasma membrane	24.87	24.41
KRH63387	Soybean	plasma membrane, plastid	24.45	24.12
KRH41857	Soybean	plasma membrane	6.01	21.92
KRH40333	Soybean	plastid	7.9	21.74
KRG94568	Soybean	mitochondrion	5.58	20.31
KRH00900	Soybean	plastid	7.9	18.99
KRH66908	Soybean	cytosol	18.97	9.86

Protein Annotations

EntrezGene:100792897	MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EMBL:ACUP02002802	EnsemblPlantsGene:GLYMA_05G028500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0043231	GO:GO:0055085	UniProt:I1JZR0	InterPro:IPR003439
EnsemblPlants:KRH56933	ProteinID:KRH56933	ProteinID:KRH56933.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0002339CBD	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:2449777..2459772

Molecular Weight (calculated)

105864.0 Da

IEP (calculated)

8.081

GRAVY (calculated)

0.016

Length

949 amino acids

Sequence
(BLAST)

001: MTNPAPASFW TQANALLRKN LTFQKRNVKT NVQLVLFPVF LCLLLFALQR FIDTQIGGSA FKCGCVCANN TTREHSHCPD SQKVCGVQYS DSLQAAFCAI
101: PNPIEWPPLL QLPAPSSRAV RTPSLPLSDL PDASCRRTDS CPLTLLFTAQ NHSFAKNVAA NMFGSALSVS DFGSDFLASL AMNVLGSESP PWGNNFIEIA
201: FSSGDPIYYL QKKCTDTEKS GLSFPSLPAA DNEIKCAQAL NLWRNSSSEI NGELYKGYQT GNTDGQVNEI VSAFDFLNSN RNRYNVSIWY NSTYKQGTGF
301: SSNVLLRIPR SINLLSNSYL QFLLGPGTKM LFEFVKEMPK PETSFRLEIS SLLGTMFFTW VILQLFPVVL TSLVYEKQQK LRIMMKMHGL GDGPYWMISY
401: GYFLAISIIY MLCFVIFGSL LGLKIFTIND YSIQFVFYFI YINLQIALAF LVASIFSNVK TATVTAYIGV FGTGLLAGFL FQFFVQNTSF PRGWIIVMEL
501: YPGFALYRGL YELAQFSFEG SSSETGGMKW QNLSESTNGM KEVLIIMFVE WIMMLFAAFY VDQVLSSGSR KGPLFFLKGF QKRPPFQKLD AQMPVSKVFS
601: QMEKPDVIQE KEKVEQLLLE PTINHAIVCD DLKKVYPGRD GNPDKYAVRG LFLSVPQGEC FGMLGPNGAG KTSFINMMIG LTKPTSGMAF VQGLDIRTQM
701: DGIYTTMGVC PQHDLLWESL TGREHLFFYG RLKNLKGSVL TQEVEESLES LNLFHGGVAD KQVGKYSGGM KRRLSVAISL IGDPRVVYMD EPSSGLDPAS
801: RKNLWNVVKH AKQNRAIILT THSMEEAEAL CDRLGIFVNG NLQCVGNAKE LKARYGGTYV FTMTTSSDHE KDVENMVQKL TPNANKIYHL SGTQKFELPK
901: GDVRITDVFQ AVDAAKRNFT VSAWGLVDTT LEDVFIKVAR EAQAFDTLS

Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)

001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS

Arabidopsis Description

ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.