Factsheet for Bra033786.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	55.7	26.39
Bra015049.1-P	Field mustard	plasma membrane	67.79	22.62
TraesCS7A01G367700.1	Wheat	plasma membrane	42.28	22.18
Bra018115.1-P	Field mustard	plasma membrane	64.77	20.84
Bra033785.1-P	Field mustard	plasma membrane	65.44	20.7
Bra018113.1-P	Field mustard	plasma membrane	65.1	20.59
KRH54520	Soybean	plasma membrane, plastid	55.7	20.57
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	43.62	20.38
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.93	19.59
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	60.74	19.55
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	10.74	19.05
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	10.4	18.45
HORVU4Hr1G039510.1	Barley	cytosol	10.4	18.45
Solyc03g113060.2.1	Tomato	extracellular	55.7	17.58
Solyc03g113040.2.1	Tomato	plastid	55.37	17.46
KRH03450	Soybean	plasma membrane, plastid	55.03	17.19
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	24.16	16.9
KRH63384	Soybean	plasma membrane	41.28	16.9
KRH56933	Soybean	plasma membrane, plastid	53.36	16.75
Bra019513.1-P	Field mustard	plasma membrane	50.0	16.69
TraesCS1D01G345200.1	Wheat	plasma membrane	52.35	16.39
TraesCS1A01G343000.1	Wheat	plasma membrane	52.35	16.37
TraesCS1B01G356200.1	Wheat	plasma membrane	52.01	16.28
Os08t0398300-01	Rice	plasma membrane	51.68	16.09
HORVU1Hr1G075620.5	Barley	plasma membrane	51.34	16.04
KXG25097	Sorghum	plasma membrane	51.01	15.87
Solyc06g070950.1.1	Tomato	plasma membrane	46.98	15.71
HORVU4Hr1G087670.8	Barley	mitochondrion	50.34	15.62
TraesCS4B01G365000.1	Wheat	plasma membrane	51.01	15.45
Zm00001d050259_P002	Maize	plasma membrane	51.01	15.45
TraesCSU01G138200.1	Wheat	plasma membrane	51.68	15.43
OQU89360	Sorghum	plasma membrane	48.66	15.3
Os06t0589300-01	Rice	plasma membrane	48.66	15.28
TraesCS5A01G534100.3	Wheat	cytosol	51.01	15.05
Zm00001d020208_P003	Maize	plasma membrane	47.65	14.98
TraesCS7B01G260800.1	Wheat	plastid	47.99	14.96
TraesCS5B01G188600.1	Wheat	plasma membrane	47.65	14.95
TraesCS5D01G195700.1	Wheat	plasma membrane	47.32	14.9
TraesCS5A01G193200.1	Wheat	plasma membrane	47.32	14.9
TraesCS7D01G355100.1	Wheat	plastid	47.65	14.87
Bra012927.1-P	Field mustard	cytosol	30.54	14.8
EER89983	Sorghum	plastid	46.98	14.68
Zm00001d036927_P001	Maize	plasma membrane, plastid	47.32	14.61
HORVU5Hr1G056930.20	Barley	plasma membrane	47.32	14.43
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	46.64	14.03
TraesCS3D01G368700.2	Wheat	plasma membrane	44.97	13.84
GSMUA_Achr7P23890_001	Banana	plasma membrane	53.02	13.5
GSMUA_Achr3P20510_001	Banana	plasma membrane	51.01	12.96
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	19.46	11.81
Bra022481.1-P	Field mustard	plastid	10.4	9.42
Bra004271.1-P	Field mustard	cytosol	7.72	8.71
Bra008779.1-P	Field mustard	plastid	6.71	7.3
Bra018116.1-P	Field mustard	golgi, mitochondrion	22.82	6.9
Bra012928.1-P	Field mustard	plasma membrane	20.47	6.58
Bra012930.1-P	Field mustard	plasma membrane	18.46	6.06
Solyc06g070930.2.1	Tomato	plastid	3.02	3.28
Bra000236.1-P	Field mustard	mitochondrion	18.46	2.99
Bra038152.1-P	Field mustard	plasma membrane, vacuole	3.02	2.2
VIT_07s0095g00600.t01	Wine grape	extracellular	0.34	1.45

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:ABCA	InterPro:ABC_transporter-like	EnsemblPlantsGene:Bra033786	EnsemblPlants:Bra033786.1
EnsemblPlants:Bra033786.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	UniProt:M4EY94
InterPro:P-loop_NTPase	PFAM:PF00005	PANTHER:PTHR19229	PANTHER:PTHR19229:SF127	SUPFAM:SSF52540	UniParc:UPI0002543D61

Description

AT3G47740 (E=8e-052) ATATH2, ATH2 | ATATH2; ATPase, coupled to transmembrane movement of substances / transporter

Coordinates

chrA01:+:14242000..14248050

Molecular Weight (calculated)

32710.2 Da

IEP (calculated)

8.898

GRAVY (calculated)

-0.472

Length

298 amino acids

Sequence
(BLAST)

001: MAGTRLQALS DGLAAKEMEG TLANRFEALE KAIASQIEQN ERHDGDVREM IEAFKVMTKK NTANASASGE LNRGKVQCVG AMRNEPYCYN RHNQSEKVEK
101: LMLEQSISHT IVCNKMKKEY PGRDGNPPKM AVQGLSFAVP SGECFGMLGP NGAGKTSFIN MAVEESLKSV NLLRGGVSDN PAGKYSGDGR LQCIGNPKEL
201: KGRYGGSYVL TMTTTPEHAK DVEMLVQDVS PNARKLYHIA GTQKFEIPKE EVRISQVFQA VEKAKRSFKV FAWGLADTTL EDVFIKVARS GQAYNVFS

Best Arabidopsis Sequence Match ( AT3G47740.1 )
(BLAST)

001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS

Arabidopsis Description

ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.