Factsheet for Bra022481.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16404	Canola	plastid	98.78	98.78
CDY57805	Canola	plastid	97.57	97.57
AT1G65410.1	Thale cress	plastid	90.88	86.67
GSMUA_Achr1P08960_001	Banana	cytosol, mitochondrion, plastid	67.48	75.0
Zm00001d003145_P001	Maize	mitochondrion	27.96	73.02
VIT_04s0023g00290.t01	Wine grape	plastid	74.47	71.85
KRH40333	Soybean	plastid	74.16	70.72
Solyc04g056650.2.1	Tomato	plastid	74.77	70.29
TraesCS5B01G369900.1	Wheat	plastid	72.34	66.67
EER96343	Sorghum	plastid	70.82	66.01
Os03t0670100-01	Rice	plastid	68.39	63.74
Zm00001d047131_P001	Maize	plastid	27.96	63.45
TraesCS5A01G367900.1	Wheat	golgi	72.34	62.47
Zm00001d019644_P003	Maize	plastid	70.82	61.48
KRH00900	Soybean	plastid	72.64	60.51
TraesCS5D01G377300.1	Wheat	cytosol, peroxisome, plastid	71.73	59.75
HORVU5Hr1G091750.1	Barley	plastid	70.21	59.69
Bra004271.1-P	Field mustard	cytosol	24.01	29.92
Bra008779.1-P	Field mustard	plastid	20.67	24.82
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	21.28	11.13
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	9.42	10.4
Bra018115.1-P	Field mustard	plasma membrane	24.01	8.53
Bra015049.1-P	Field mustard	plasma membrane	22.8	8.4
Bra033785.1-P	Field mustard	plasma membrane	23.71	8.28
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	14.89	8.28
Bra018113.1-P	Field mustard	plasma membrane	23.4	8.17
Bra019513.1-P	Field mustard	plasma membrane	21.88	8.06
Bra012928.1-P	Field mustard	plasma membrane	20.67	7.34
Bra012927.1-P	Field mustard	cytosol	13.68	7.32
Bra018116.1-P	Field mustard	golgi, mitochondrion	21.58	7.2
Bra012930.1-P	Field mustard	plasma membrane	16.72	6.06
Bra000236.1-P	Field mustard	mitochondrion	20.36	3.64
Bra038152.1-P	Field mustard	plasma membrane, vacuole	2.74	2.2

Protein Annotations

Gene3D:3.40.50.300	MapMan:5.8.2.2.3	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra022481
EnsemblPlants:Bra022481.1	EnsemblPlants:Bra022481.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006869	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	UniProt:M4E133	InterPro:P-loop_NTPase	PFAM:PF00005	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR43023	PANTHER:PTHR43023:SF3	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000254592F	:

Description

AT1G65410 (E=4e-150) ATNAP11, TGD3 | ATNAP11 (ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 11); transporter

Coordinates

chrA02:+:9506399..9508275

Molecular Weight (calculated)

35971.4 Da

IEP (calculated)

8.459

GRAVY (calculated)

-0.099

Length

329 amino acids

Sequence
(BLAST)

001: MLSFASSSLL RTSLHFHASS HQPVPMSRRS ITPFRRKVFC CSTATKFDSL SKSGGGLREP ENDSDVLIEC RDVYKSFGDK HILKGVSFKI RHGEAVGVIG
101: PSGTGKSTIL KIMAGLLAPD KGEVYIRGKK RAGLISDEEI SGLRIGLVFQ SAALFDSLTV RENVGFLLYE NSKMSENQIS ELVTQTLAAV GLKGVENRLP
201: SELSGGMKKR VALARSLIFD TTKEVIEPEV LLYDEPTAGL DPIASTVVED LIRSVHLTGE EDSLGKPGKI ASYLVVTHQH STIQRAVDRL LFLYEGKIVW
301: QGMTHEFTTS TNPIVQQFAT GSLDGPIRY

Best Arabidopsis Sequence Match ( AT1G65410.1 )
(BLAST)

001: MLSLSCSSSS SSLLPPSLHY HGSSSVQSIV VPRRSLISFR RKVSCCCIAP PQNLDNDATK FDSLTKSGGG MCKERGLEND SDVLIECRDV YKSFGEKHIL
101: KGVSFKIRHG EAVGVIGPSG TGKSTILKIM AGLLAPDKGE VYIRGKKRAG LISDEEISGL RIGLVFQSAA LFDSLSVREN VGFLLYERSK MSENQISELV
201: TQTLAAVGLK GVENRLPSEL SGGMKKRVAL ARSLIFDTTK EVIEPEVLLY DEPTAGLDPI ASTVVEDLIR SVHMTDEDAV GKPGKIASYL VVTHQHSTIQ
301: RAVDRLLFLY EGKIVWQGMT HEFTTSTNPI VQQFATGSLD GPIRY

Arabidopsis Description

TGD3Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9AT00]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.