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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36930 Canola plasma membrane 99.47 99.47
Bra033785.1-P Field mustard plasma membrane 86.52 86.52
AT3G47780.1 Thale cress plasma membrane 84.93 85.56
Bra018114.1-P Field mustard cytosol, peroxisome, plasma membrane 53.08 79.49
Bra015049.1-P Field mustard plasma membrane 72.4 76.37
Bra018115.1-P Field mustard plasma membrane 74.84 76.13
KRH54520 Soybean plasma membrane, plastid 59.45 69.39
Bra012931.1-P Field mustard cytosol, peroxisome, plasma membrane 42.68 67.91
Bra019513.1-P Field mustard plasma membrane 63.91 67.41
Solyc03g113040.2.1 Tomato plastid 66.77 66.56
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 34.29 65.78
KRH63384 Soybean plasma membrane 50.53 65.38
Bra033786.1-P Field mustard cytosol, mitochondrion, nucleus 20.59 65.1
Solyc03g113060.2.1 Tomato extracellular 64.97 64.83
Bra012927.1-P Field mustard cytosol 42.25 64.72
KRH56933 Soybean plasma membrane, plastid 64.12 63.65
KRH03450 Soybean plasma membrane, plastid 64.01 63.21
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 42.25 62.38
TraesCS7A01G367700.1 Wheat plasma membrane 35.99 59.68
TraesCS1D01G345200.1 Wheat plasma membrane 59.34 58.72
KXG25097 Sorghum plasma membrane 59.66 58.66
TraesCS1A01G343000.1 Wheat plasma membrane 59.24 58.55
TraesCS1B01G356200.1 Wheat plasma membrane 59.02 58.4
HORVU4Hr1G087670.8 Barley mitochondrion 59.34 58.23
Os08t0398300-01 Rice plasma membrane 59.02 58.1
VIT_07s0095g00600.t01 Wine grape extracellular 4.25 57.97
HORVU1Hr1G075620.5 Barley plasma membrane 58.49 57.76
TraesCS4B01G365000.1 Wheat plasma membrane 59.24 56.71
Zm00001d050259_P002 Maize plasma membrane 59.02 56.5
TraesCSU01G138200.1 Wheat plasma membrane 59.13 55.81
TraesCS5A01G534100.3 Wheat cytosol 59.45 55.45
TraesCS5A01G193200.1 Wheat plasma membrane 55.52 55.29
OQU89360 Sorghum plasma membrane 55.63 55.27
Solyc06g070950.1.1 Tomato plasma membrane 51.91 54.88
TraesCS5D01G195700.1 Wheat plasma membrane 55.1 54.86
Zm00001d020208_P003 Maize plasma membrane 54.99 54.64
TraesCS3D01G368700.2 Wheat plasma membrane 56.05 54.55
TraesCS7D01G355100.1 Wheat plastid 54.46 53.72
Os06t0589300-01 Rice plasma membrane 53.93 53.53
TraesCS5B01G188600.1 Wheat plasma membrane 53.82 53.37
TraesCS7B01G260800.1 Wheat plastid 54.14 53.35
HORVU5Hr1G056930.20 Barley plasma membrane 55.31 53.33
EER89983 Sorghum plastid 53.5 52.83
Zm00001d036927_P001 Maize plasma membrane, plastid 54.03 52.75
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 54.35 51.66
GSMUA_Achr7P23890_001 Banana plasma membrane 61.89 49.83
GSMUA_Achr3P20510_001 Banana plasma membrane 59.77 48.0
Solyc06g070930.2.1 Tomato plastid 12.31 42.34
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 7.43 41.67
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 7.43 41.67
HORVU4Hr1G039510.1 Barley cytosol 7.22 40.48
Bra004271.1-P Field mustard cytosol 6.9 24.62
Bra012928.1-P Field mustard plasma membrane 23.78 24.16
Bra018116.1-P Field mustard golgi, mitochondrion 24.95 23.83
Bra008779.1-P Field mustard plastid 6.9 23.72
Bra022481.1-P Field mustard plastid 8.17 23.4
Bra012930.1-P Field mustard plasma membrane 20.06 20.82
Bra038152.1-P Field mustard plasma membrane, vacuole 8.17 18.78
Bra000236.1-P Field mustard mitochondrion 20.38 10.42
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABCAInterPro:ABC_transporter-likeInterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra018113EnsemblPlants:Bra018113.1EnsemblPlants:Bra018113.1-PGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
InterPro:IPR003439UniProt:M4DNM6InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF12698ScanProsite:PS00211
PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelix
UniParc:UPI000253F3E6SEG:seg::::
Description
AT3G47780 (E=0.0) ATATH6, ATH6 | ATATH6; ATPase, coupled to transmembrane movement of substances / transporter
Coordinates
chrA06:-:10310597..10314962
Molecular Weight (calculated)
105327.0 Da
IEP (calculated)
8.199
GRAVY (calculated)
-0.019
Length
942 amino acids
Sequence
(BLAST)
001: MADSGPASFS TRANALLRKN LSYQTRNIWS NIRLIMIPFY LCVLLVGIQA LFDSQITNSA DNQCGCQCTL TNANGKCLNK TCGIEYSSTD QAFFCSIPNP
101: PQWPPLLQVP PPESRAVRAS FLPEIGLPSE SCRRTGSCPV TFLFTGSNHS LGASFYENML PSSVTVNSSD LLQGLAYNVL GTETEAELTN YLDPGIASDL
201: PIYNIQSRCI SNAAFPFSFG VGPLKFQKDL RCVQGWNLWR NNSKEVNDVI FKGYKKGNPE GKANEIAAAY DLLNTNRNNF NVHIWFNSTY EENSRNRPST
301: LVRVARSVNL VSNAYLQFLQ GSGTKMLFEY VKEMPKEETS LRLDIASLIG PLFFTWVILL LFPVILSSLV YEKQERLRII MKMHGLGDGP YWMISYAYFL
401: TISTLYFICL MIFGSAIGLK FFRLNDYSLQ FVFYFLYVNL QIALCFLVSS LFSKVKTSTV VAYIYVFGSG LLGTFLFQFL IQDSSFPRGW IIFMELYPGF
501: SLYRGLYEFA QFAFQGNLRG ADGMKWKDFS DSAMDEVFYI IIVEWFLALI AAYYIDKIVS SGKDPLFFLK TPFKKSPSMR KPSLQRQGSK VFVEMEKPDV
601: TQEIEKVEKL MLEDSTSHAI VCDNLKKVYP GRDGNPPKMA VRGLSLAVPS GECFGMLGPN GAGKTSFINM MTGLLKPTSG TGLVQGLDIC SDMDRVYTSM
701: GVCPQHDLLW ETLTGREHLL FYGRLKNLKG SDLTQAVEES LRSVNLFHGG VGDKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV
801: IKRAKQNTAI ILTTHSMEEA EFLCDRLGIF VDGSLQCIGN PKELKGRYGG SYVFTMTTSS EHEGDVEKLI QDVSPNAKKI YHIAGTQKFE LPKEDVRISE
901: VFQAVEKAKS NFTVFAWGLA DTTLEDVFIK VARTGQAFNV FS
Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)
001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS
Arabidopsis Description
ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.