Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g05860.t01 | Wine grape | plasma membrane, plastid | 68.12 | 4.95 |
| KXG25097 | Sorghum | plasma membrane | 62.32 | 4.49 |
| Os08t0398300-01 | Rice | plasma membrane | 60.87 | 4.39 |
| Zm00001d050259_P002 | Maize | plasma membrane | 62.32 | 4.37 |
| Zm00001d020208_P003 | Maize | plasma membrane | 59.42 | 4.32 |
| HORVU1Hr1G075620.5 | Barley | plasma membrane | 59.42 | 4.3 |
| Bra018113.1-P | Field mustard | plasma membrane | 57.97 | 4.25 |
| OQU89360 | Sorghum | plasma membrane | 57.97 | 4.22 |
| AT5G61700.1 | Thale cress | plasma membrane | 55.07 | 4.14 |
| AT3G47770.2 | Thale cress | endoplasmic reticulum, golgi, plasma membrane, plastid | 55.07 | 4.1 |
| TraesCS1B01G356200.1 | Wheat | plasma membrane | 56.52 | 4.1 |
| TraesCS1D01G345200.1 | Wheat | plasma membrane | 56.52 | 4.1 |
| TraesCS1A01G343000.1 | Wheat | plasma membrane | 56.52 | 4.09 |
| AT3G47780.1 | Thale cress | plasma membrane | 55.07 | 4.06 |
| TraesCS3D01G368700.2 | Wheat | plasma membrane | 56.52 | 4.03 |
| TraesCS5A01G193200.1 | Wheat | plasma membrane | 55.07 | 4.02 |
| TraesCS5B01G188600.1 | Wheat | plasma membrane | 55.07 | 4.0 |
| Bra018115.1-P | Field mustard | plasma membrane | 53.62 | 4.0 |
| TraesCS4B01G365000.1 | Wheat | plasma membrane | 56.52 | 3.96 |
| AT3G47760.3 | Thale cress | plasma membrane | 53.62 | 3.95 |
| TraesCS5D01G195700.1 | Wheat | plasma membrane | 53.62 | 3.91 |
| HORVU5Hr1G056930.20 | Barley | plasma membrane | 55.07 | 3.89 |
| TraesCS5A01G534100.3 | Wheat | cytosol | 56.52 | 3.86 |
| HORVU4Hr1G087670.8 | Barley | mitochondrion | 53.62 | 3.85 |
| AT3G47750.1 | Thale cress | mitochondrion, plasma membrane | 52.17 | 3.84 |
| Bra033785.1-P | Field mustard | plasma membrane | 52.17 | 3.82 |
| TraesCSU01G138200.1 | Wheat | plasma membrane | 55.07 | 3.81 |
| VIT_18s0041g02240.t01 | Wine grape | plasma membrane | 40.58 | 3.8 |
| AT3G47740.1 | Thale cress | plasma membrane | 49.28 | 3.65 |
| AT5G61740.1 | Thale cress | plasma membrane | 47.83 | 3.63 |
| TraesCS7A01G367700.1 | Wheat | plasma membrane | 27.54 | 3.35 |
| GSMUA_Achr7P23890_001 | Banana | plasma membrane | 56.52 | 3.33 |
| GSMUA_Achr3P20510_001 | Banana | plasma membrane | 53.62 | 3.15 |
| Bra015049.1-P | Field mustard | plasma membrane | 37.68 | 2.91 |
| EER89983 | Sorghum | plastid | 36.23 | 2.62 |
| Zm00001d036927_P001 | Maize | plasma membrane, plastid | 36.23 | 2.59 |
| Bra012927.1-P | Field mustard | cytosol | 21.74 | 2.44 |
| Os06t0589300-01 | Rice | plasma membrane | 33.33 | 2.42 |
| HORVU7Hr1G085680.2 | Barley | endoplasmic reticulum, peroxisome, plastid | 33.33 | 2.32 |
| TraesCS7D01G355100.1 | Wheat | plastid | 31.88 | 2.3 |
| TraesCS7B01G260800.1 | Wheat | plastid | 31.88 | 2.3 |
| VIT_17s0000g05850.t01 | Wine grape | plasma membrane | 18.84 | 1.36 |
| Bra012931.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 10.14 | 1.18 |
| VIT_14s0068g01730.t01 | Wine grape | plastid | 2.9 | 0.7 |
| VIT_08s0007g08730.t01 | Wine grape | mitochondrion, plasma membrane | 18.84 | 0.69 |
| Bra018114.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 5.8 | 0.64 |
| VIT_04s0023g00290.t01 | Wine grape | plastid | 2.9 | 0.59 |
| Bra033786.1-P | Field mustard | cytosol, mitochondrion, nucleus | 1.45 | 0.34 |
| VIT_11s0052g00540.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_12s0055g00730.t01 | Wine grape | extracellular | 0.0 | 0.0 |
| CDX94927 | Canola | cytosol | 0.0 | 0.0 |
| HORVU3Hr1G030470.1 | Barley | cytosol, extracellular, plasma membrane | 0.0 | 0.0 |
| PGSC0003DMT400083070 | Potato | cytosol | 0.0 | 0.0 |
| HORVU4Hr1G039510.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU6Hr1G043820.1 | Barley | cytosol, endoplasmic reticulum, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.2 | InterPro:ABCA | ProteinID:CBI18325 | ProteinID:CBI18325.3 | UniProt:D7SRP3 | EMBL:FN594971 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0042626 | GO:GO:0055085 | PANTHER:PTHR19229 |
| PANTHER:PTHR19229:SF141 | TMHMM:TMhelix | UniParc:UPI0001BE1735 | ArrayExpress:VIT_07s0095g00600 | EnsemblPlantsGene:VIT_07s0095g00600 | EnsemblPlants:VIT_07s0095g00600.t01 |
Description
No Description!
Coordinates
chr7:-:13228902..13229275
Molecular Weight (calculated)
7865.6 Da
IEP (calculated)
9.173
GRAVY (calculated)
0.803
Length
69 amino acids
Sequence
(BLAST)
(BLAST)
1: MTTTSNLCFT LYIINWQISL AFLVVATFTN IKATTVVGYI YVFGTGLLGS FLFQFFVQDT TFPSKWKTF
001: MVNKFFLLLV LMGNMYSNSS GFDGDLAYYV LGSSSFPAYT NHMDSAFISD LPIYNIQHEC SPNSSFSILI HQSPLAFPKE VNCVQGLNLW RNSSSDVNNE
101: LFKGYRKGNP DKKINEFAGA FDFQNTNGNN LNVSVWYNST YKNDTVVRPM ALIRVPRLVN LASNAYLEFL KGSETKILFE YVKEMPKPET KLSLDIASLI
201: GPLFFTWVIL LLFPVILTTL VYEKQQRLRI MMKMHGLGDV PYWIVSYTYF LLISILYMLC FAIFGSLIGL NFFRLNDYSI QLVFFFICIN LQISVAFLAS
301: AMFSDVKTAT VIAYIYVFGT GLLGIFLFQF FLEDPLFPRG WIIAMELYPG FSLYRGLYEL SQSAFAGDYR GIDGMKWRDF GNGMKEVTCI MLIEWLLLLG
401: LAYYIDQIIY SRKHPLFFLL QSTSKKKQHF SDNKISKVVV EMEKPDVCRE REKVEQCLLK STRDSAVLCN NLKKVYSGKD GNPQKLAVRG LSLALPQGEC
501: FGMLGPNGAG KTSFINMMTG IIKPSSGTAF VQGLDILTDM DRIYTTIGVC PQHDLLWEKL SGREHLLFYG RLKNLKGSVL TQAVEESLRS VNLFHGGIGD
601: KQVSKYSGGM KRRLSVAISL IGSPKVVYMD EPSTGLDPAS RKSLWDVVKR AKRKGAIILT SRVF
101: LFKGYRKGNP DKKINEFAGA FDFQNTNGNN LNVSVWYNST YKNDTVVRPM ALIRVPRLVN LASNAYLEFL KGSETKILFE YVKEMPKPET KLSLDIASLI
201: GPLFFTWVIL LLFPVILTTL VYEKQQRLRI MMKMHGLGDV PYWIVSYTYF LLISILYMLC FAIFGSLIGL NFFRLNDYSI QLVFFFICIN LQISVAFLAS
301: AMFSDVKTAT VIAYIYVFGT GLLGIFLFQF FLEDPLFPRG WIIAMELYPG FSLYRGLYEL SQSAFAGDYR GIDGMKWRDF GNGMKEVTCI MLIEWLLLLG
401: LAYYIDQIIY SRKHPLFFLL QSTSKKKQHF SDNKISKVVV EMEKPDVCRE REKVEQCLLK STRDSAVLCN NLKKVYSGKD GNPQKLAVRG LSLALPQGEC
501: FGMLGPNGAG KTSFINMMTG IIKPSSGTAF VQGLDILTDM DRIYTTIGVC PQHDLLWEKL SGREHLLFYG RLKNLKGSVL TQAVEESLRS VNLFHGGIGD
601: KQVSKYSGGM KRRLSVAISL IGSPKVVYMD EPSTGLDPAS RKSLWDVVKR AKRKGAIILT SRVF
Arabidopsis Description
ABCA8ABC transporter A family member 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.