Factsheet for TraesCS5B01G188600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
golgi 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G195700.1	Wheat	plasma membrane	95.58	95.98
TraesCS5A01G193200.1	Wheat	plasma membrane	94.42	94.82
HORVU5Hr1G056930.20	Barley	plasma membrane	93.68	91.1
OQU89360	Sorghum	plasma membrane	76.32	76.48
Zm00001d020208_P003	Maize	plasma membrane	75.89	76.05
TraesCS1B01G356200.1	Wheat	plasma membrane	70.21	70.06
CDX94927	Canola	cytosol	8.53	68.07
TraesCS4B01G365000.1	Wheat	plasma membrane	68.95	66.56
PGSC0003DMT400083070	Potato	cytosol	8.42	64.52
KRH54520	Soybean	plasma membrane, plastid	53.16	62.58
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	61.89	61.96
Solyc03g113040.2.1	Tomato	plastid	60.63	60.95
VIT_12s0055g00730.t01	Wine grape	extracellular	8.11	60.63
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	30.95	59.88
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	40.21	59.87
CDY02120	Canola	cytosol, nucleus, plasma membrane	41.05	59.18
Solyc03g113060.2.1	Tomato	extracellular	58.42	58.79
CDY31786	Canola	cytosol, nucleus, plasma membrane	40.63	58.48
KRH63384	Soybean	plasma membrane	44.11	57.55
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.89	57.23
KRH56933	Soybean	plasma membrane, plastid	56.74	56.8
AT3G47790.1	Thale cress	plasma membrane	52.53	55.38
KRH03450	Soybean	plasma membrane, plastid	55.58	55.35
AT3G47780.1	Thale cress	plasma membrane	54.21	55.08
VIT_07s0095g00600.t01	Wine grape	extracellular	4.0	55.07
CDY23043	Canola	cytosol, mitochondrion	29.47	54.69
Bra019513.1-P	Field mustard	plasma membrane	51.16	54.42
CDY24156	Canola	plasma membrane	53.68	54.14
CDY36930	Canola	plasma membrane	53.58	54.03
CDX68440	Canola	cytosol, mitochondrion	7.89	53.96
TraesCS1B01G356300.1	Wheat	mitochondrion	53.58	53.92
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	50.21	53.84
Bra018113.1-P	Field mustard	plasma membrane	53.37	53.82
CDX68441	Canola	plasma membrane	53.37	53.82
CDX77874	Canola	plasma membrane	46.95	53.8
CDY21797	Canola	plasma membrane	51.05	53.65
CDX83025	Canola	plasma membrane	52.95	53.4
Bra033785.1-P	Field mustard	plasma membrane	52.84	53.29
TraesCS7B01G260800.1	Wheat	plastid	53.37	53.03
CDY24158	Canola	plasma membrane	51.68	53.02
Solyc06g070950.1.1	Tomato	plasma membrane	49.68	52.97
GSMUA_Achr7P23890_001	Banana	plasma membrane	64.74	52.56
Bra018115.1-P	Field mustard	plasma membrane	51.16	52.48
AT5G61700.1	Thale cress	plasma membrane	50.32	52.13
AT3G47760.3	Thale cress	plasma membrane	51.26	52.03
TraesCS6B01G211300.1	Wheat	cytosol, peroxisome, plasma membrane	43.47	52.02
PGSC0003DMT400083071	Potato	plasma membrane	51.16	51.98
AT5G61740.1	Thale cress	plasma membrane	49.58	51.82
CDY62599	Canola	plasma membrane	47.37	51.78
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	50.42	51.73
CDY39546	Canola	plasma membrane	50.74	51.55
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.11	51.52
CDX77421	Canola	plasma membrane	50.63	51.44
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	50.74	51.44
AT3G47740.1	Thale cress	plasma membrane	50.42	51.39
CDY02114	Canola	plasma membrane	47.68	51.07
Bra015049.1-P	Field mustard	plasma membrane	47.89	50.95
CDY23039	Canola	plasma membrane	47.16	50.45
CDY36931	Canola	plastid	49.26	50.27
CDY24157	Canola	plastid	49.58	49.53
CDY23798	Canola	nucleus, peroxisome, plasma membrane	20.0	49.48
Bra012927.1-P	Field mustard	cytosol	31.89	49.27
GSMUA_Achr3P20510_001	Banana	plasma membrane	58.95	47.74
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	14.95	47.65
VIT_18s0041g02240.t01	Wine grape	plasma membrane	35.58	45.92
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.53	45.77
CDX68439	Canola	nucleus	6.63	39.87
Solyc06g070930.2.1	Tomato	plastid	10.0	34.67
TraesCS3B01G432400.1	Wheat	plastid	7.37	25.55
TraesCS4B01G315100.1	Wheat	cytosol	6.53	23.57
TraesCS7B01G327900.1	Wheat	cytosol, golgi, mitochondrion	6.42	23.46
TraesCS1B01G356100.2	Wheat	plasma membrane	23.47	23.13
TraesCS4B01G336400.1	Wheat	cytosol, plastid	6.42	21.48
TraesCS5B01G369900.1	Wheat	plastid	6.84	18.21

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF12698	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5B01G188600	EnsemblPlants:TraesCS5B01G188600.1	TIGR:cd03263	SEG:seg

Description

No Description!

Coordinates

chr5B:+:340616765..340623125

Molecular Weight (calculated)

105944.0 Da

IEP (calculated)

8.278

GRAVY (calculated)

0.112

Length

950 amino acids

Sequence
(BLAST)

001: MIRTRERKVC PHRSPAGAGV LHPDGYITGK RNLKTNIGIT IFPILICVLL LVLQNIINNE LDKPKYNCGC ACVDTDMYGT CKKRECGVQY STLEQVWSCA
101: IPSPPRWPAL IQVPQPQFRA VRTVSQPFDD LPDPSCRDSL SCPATVLITG KDRGFAESIA GGLFPVFAPT LNVTDYLDAL SRIVVGSDTI PWYTQLIEPA
201: FSSSDTLYLL QPQCVPYLSQ TISYNARGIP LQLNIQCVEG VLLWRESTSV INDELLKGYT QRGGKTNEFI AGYDFLSSTE YGLGINVWYN STYSGKTAFS
301: FIAALRVPRL VNAVSNAYLK YIRGPGVEVL LEYVKDMPKV GTSYRFDLSS LISPLFFTWI VELLFPVMLT YLVYEKQQKL KIMMKMQGLK DGPYWMISYG
401: YFFVLSVVYM TFFVFFGSLI GLNFFRVNNY GIQIVFFFVY INLQIAFAFF VASFFSSVKI ATVIGYIYVF GSGLLGAFLF RFFIEDINFS RGWILVMEIV
501: PGFSLYRGLY ELGQYAFSGN AMGATGMMWE NLKDPINGMR DILIVMTVEW ALMLVLAFYL DQVSSIGGSV GNPLLFFRCL QKKHAPPLQS SFAQQNHKVA
601: VDMEKADVAQ ERQVVEQLLM DCNANQAIIC DNLRKVYPGK DGNPDKLAVR GLSLALPKGQ CFGMLGPNGA GKTSFISMMV GLTKPTSGTA YAHGMDIRMD
701: MDGIYTNMGV CPQHDLLWET LTGKEHLFFY ARLKNLQGAA LVKAVNDSLK SVNLFHGGVG DKQVGTYSGG MKRRLSVAIS LIGDPKVVYM DEPSTGLDPA
801: SRNNLWNIVK EAKRNRAIVL TTHSMEEAEV LCDRLGIFVD GEFQCLGNPK ELKARYGGAY IFTVTTPPEQ ESKIEQLVHR LSPSANKIYN LSGTQKFELP
901: KQEVRIADVF HAVERAKSRL SIHAWGLVDT TLEDVFIKVA KGAPVFNDVA

Best Arabidopsis Sequence Match ( AT3G47740.1 )
(BLAST)

001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS

Arabidopsis Description

ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.