Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31786 | Canola | cytosol, nucleus, plasma membrane | 98.63 | 98.48 |
| CDY23798 | Canola | nucleus, peroxisome, plasma membrane | 50.38 | 86.46 |
| CDX94927 | Canola | cytosol | 15.02 | 83.19 |
| CDY23043 | Canola | cytosol, mitochondrion | 61.76 | 79.49 |
| CDY62599 | Canola | plasma membrane | 97.88 | 74.22 |
| AT5G61700.1 | Thale cress | plasma membrane | 89.53 | 64.34 |
| CDX68440 | Canola | cytosol, mitochondrion | 12.9 | 61.15 |
| CDY02114 | Canola | plasma membrane | 77.85 | 57.84 |
| CDY23039 | Canola | plasma membrane | 77.39 | 57.43 |
| Solyc06g070920.2.1 | Tomato | extracellular, plasma membrane | 55.54 | 57.37 |
| KRH54520 | Soybean | plasma membrane, plastid | 69.5 | 56.75 |
| CDY36932 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 73.6 | 54.74 |
| CDY36930 | Canola | plasma membrane | 76.48 | 53.5 |
| CDY24156 | Canola | plasma membrane | 75.87 | 53.08 |
| TraesCS7A01G367700.1 | Wheat | plasma membrane | 45.68 | 52.99 |
| CDX83025 | Canola | plasma membrane | 75.57 | 52.87 |
| CDY24158 | Canola | plasma membrane | 74.05 | 52.7 |
| CDX68441 | Canola | plasma membrane | 74.66 | 52.23 |
| KRG88422 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 38.54 | 51.73 |
| CDY24573 | Canola | plasma membrane | 12.29 | 50.94 |
| CDY36931 | Canola | plastid | 70.86 | 50.16 |
| CDX77421 | Canola | plasma membrane | 70.26 | 49.52 |
| CDY39546 | Canola | plasma membrane | 70.11 | 49.41 |
| CDY24157 | Canola | plastid | 71.02 | 49.21 |
| Solyc03g113040.2.1 | Tomato | plastid | 69.35 | 48.36 |
| Solyc03g113060.2.1 | Tomato | extracellular | 68.29 | 47.67 |
| CDY21797 | Canola | plasma membrane | 64.8 | 47.23 |
| KRH56933 | Soybean | plasma membrane, plastid | 67.22 | 46.68 |
| KRH03450 | Soybean | plasma membrane, plastid | 66.92 | 46.23 |
| CDX68439 | Canola | nucleus | 11.08 | 46.2 |
| CDX77874 | Canola | plasma membrane | 57.51 | 45.72 |
| KRH63384 | Soybean | plasma membrane | 50.38 | 45.6 |
| Solyc06g070950.1.1 | Tomato | plasma membrane | 60.09 | 44.44 |
| TraesCS1D01G345200.1 | Wheat | plasma membrane | 63.28 | 43.8 |
| TraesCS1B01G356200.1 | Wheat | plasma membrane | 63.28 | 43.8 |
| CDX68438 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 28.22 | 43.66 |
| TraesCS1A01G343000.1 | Wheat | plasma membrane | 63.13 | 43.65 |
| KXG25097 | Sorghum | plasma membrane | 63.43 | 43.63 |
| Os08t0398300-01 | Rice | plasma membrane | 62.97 | 43.36 |
| HORVU1Hr1G075620.5 | Barley | plasma membrane | 62.37 | 43.08 |
| HORVU4Hr1G087670.8 | Barley | mitochondrion | 62.52 | 42.92 |
| Zm00001d050259_P002 | Maize | plasma membrane | 63.58 | 42.58 |
| TraesCS5A01G193200.1 | Wheat | plasma membrane | 59.79 | 41.65 |
| TraesCS5D01G195700.1 | Wheat | plasma membrane | 59.79 | 41.65 |
| OQU89360 | Sorghum | plasma membrane | 59.33 | 41.24 |
| TraesCS4B01G365000.1 | Wheat | plasma membrane | 61.3 | 41.06 |
| TraesCS5B01G188600.1 | Wheat | plasma membrane | 59.18 | 41.05 |
| Zm00001d020208_P003 | Maize | plasma membrane | 59.03 | 41.03 |
| TraesCSU01G138200.1 | Wheat | plasma membrane | 60.85 | 40.18 |
| HORVU5Hr1G056930.20 | Barley | plasma membrane | 59.48 | 40.12 |
| TraesCS3D01G368700.2 | Wheat | plasma membrane | 58.73 | 39.98 |
| TraesCS5A01G534100.3 | Wheat | cytosol | 61.0 | 39.8 |
| Os06t0589300-01 | Rice | plasma membrane | 56.9 | 39.52 |
| TraesCS7D01G355100.1 | Wheat | plastid | 57.21 | 39.48 |
| TraesCS7B01G260800.1 | Wheat | plastid | 57.21 | 39.44 |
| EER89983 | Sorghum | plastid | 57.06 | 39.41 |
| Zm00001d036927_P001 | Maize | plasma membrane, plastid | 57.06 | 38.96 |
| HORVU7Hr1G085680.2 | Barley | endoplasmic reticulum, peroxisome, plastid | 57.06 | 37.94 |
| GSMUA_Achr7P23890_001 | Banana | plasma membrane | 67.22 | 37.86 |
| GSMUA_Achr3P20510_001 | Banana | plasma membrane | 65.4 | 36.74 |
| HORVU6Hr1G043820.1 | Barley | cytosol, endoplasmic reticulum, plasma membrane | 7.74 | 30.36 |
| HORVU3Hr1G030470.1 | Barley | cytosol, extracellular, plasma membrane | 7.44 | 29.17 |
| HORVU4Hr1G039510.1 | Barley | cytosol | 7.44 | 29.17 |
| CDY64180 | Canola | plasma membrane | 22.91 | 24.08 |
| CDY62594 | Canola | cytosol | 16.69 | 24.07 |
| CDX96058 | Canola | cytosol | 9.26 | 23.11 |
| CDY01873 | Canola | cytosol | 9.26 | 23.11 |
| CDY16404 | Canola | plastid | 11.53 | 23.1 |
| CDY58413 | Canola | cytosol, plastid | 9.56 | 22.99 |
| CDX69605 | Canola | plastid | 9.56 | 22.99 |
| CDY02116 | Canola | plasma membrane | 29.29 | 22.98 |
| CDY57805 | Canola | plastid | 11.23 | 22.49 |
| CDY24159 | Canola | golgi, mitochondrion | 30.8 | 21.66 |
| CDY52820 | Canola | cytosol, nucleus, plasma membrane | 28.07 | 21.07 |
| CDY36933 | Canola | golgi, mitochondrion | 30.8 | 21.04 |
| CDX68434 | Canola | plasma membrane | 22.61 | 20.99 |
| CDY23800 | Canola | plasma membrane | 28.83 | 20.77 |
| CDY23042 | Canola | plasma membrane | 29.44 | 20.7 |
| CDY23040 | Canola | plasma membrane | 29.74 | 20.55 |
| CDY02118 | Canola | plasma membrane | 29.44 | 19.5 |
| CDX68436 | Canola | plasma membrane | 6.98 | 15.65 |
| CDY02115 | Canola | extracellular, mitochondrion, plasma membrane, plastid | 8.19 | 14.79 |
| CDY39288 | Canola | cytosol | 4.4 | 14.65 |
| CDX68435 | Canola | mitochondrion, plastid | 5.77 | 14.56 |
| CDY62596 | Canola | cytosol, plasma membrane, vacuole | 6.53 | 14.01 |
| Solyc06g070930.2.1 | Tomato | plastid | 4.25 | 10.22 |
| CDY22536 | Canola | mitochondrion, plasma membrane | 26.86 | 9.55 |
| CDY35403 | Canola | mitochondrion, plasma membrane | 26.86 | 9.52 |
| CDY02119 | Canola | endoplasmic reticulum, plasma membrane, plastid | 2.43 | 8.94 |
| CDY23799 | Canola | cytosol, peroxisome, plasma membrane | 2.43 | 7.84 |
Protein Annotations
| MapMan:24.1.3.2.1 | Gene3D:3.40.50.300 | GO:A0A078EJ86 | InterPro:AAA+_ATPase | InterPro:ABCA | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | EnsemblPlants:CDY02120 | ProteinID:CDY02120 | ProteinID:CDY02120.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00113512001 | InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19229 | PANTHER:PTHR19229:SF141 | SMART:SM00382 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | UniParc:UPI0004EDB241 | SEG:seg | : | : | : |
Description
BnaA03g40470D
Coordinates
chrLK031932:+:238963..242236
Molecular Weight (calculated)
73739.3 Da
IEP (calculated)
9.235
GRAVY (calculated)
-0.035
Length
659 amino acids
Sequence
(BLAST)
(BLAST)
001: MATLSRKNSD RNNSADVNNE LFKGSYRGNP AGITNEIAAA YDLMNTDKKN FNVTIWYNST YKDEFSTGPV KLVRVPRSIN QISNAYLKFL KGPGLRILFE
101: FVKEVPKHAT RFNTDIASLL GPLFFTWVVL LLFPVILTSL VYEKQERLRI IMKMHGLGDG LKYFRLNSYS IQFVFYFIYL NLQIAIGFLV SSIFSKVKTV
201: TVVAYILVYG TGLLGSFLFQ TMLENQSFPE EWIVALELYP GFSLYRGLYE FSQYASRGNG MKWQDLSDSG MGEVLCIMSI EWFLALIIAF YIDQVFSSGK
301: HPFFFLNLFK KSSSIPSKPT MQRVDSKKVS IDMGKIDVSQ EREKVQQLRN EGSAGHAILC DNLKKVYPEC FGMLGPNGAG KTSFISMMTG LLKPSSGTAL
401: VQGLDICKDM NKVYTSMGVC PQHDLLWETL TGREHLLFYG RLKNIKGSAL TQAVEESLKS VSLFDGGVGD KPAGNYSGGM KRRLSVAISL IGNPKVVYLD
501: EPSTGLDPAS RKNLWDVIQR AKQNTAIILT THSMEEAEFL CDRLGIFVDG ALQCIGNSKE LKSRYGGSYV FTMTTSSEHE EDVERLVSTV SPNAKKVYHL
601: AGTQKFELPK QEVRIAEVFR AVEKAKSNFT VFAWGLADTT LEDVFIKVAK SAQAFISLS
101: FVKEVPKHAT RFNTDIASLL GPLFFTWVVL LLFPVILTSL VYEKQERLRI IMKMHGLGDG LKYFRLNSYS IQFVFYFIYL NLQIAIGFLV SSIFSKVKTV
201: TVVAYILVYG TGLLGSFLFQ TMLENQSFPE EWIVALELYP GFSLYRGLYE FSQYASRGNG MKWQDLSDSG MGEVLCIMSI EWFLALIIAF YIDQVFSSGK
301: HPFFFLNLFK KSSSIPSKPT MQRVDSKKVS IDMGKIDVSQ EREKVQQLRN EGSAGHAILC DNLKKVYPEC FGMLGPNGAG KTSFISMMTG LLKPSSGTAL
401: VQGLDICKDM NKVYTSMGVC PQHDLLWETL TGREHLLFYG RLKNIKGSAL TQAVEESLKS VSLFDGGVGD KPAGNYSGGM KRRLSVAISL IGNPKVVYLD
501: EPSTGLDPAS RKNLWDVIQR AKQNTAIILT THSMEEAEFL CDRLGIFVDG ALQCIGNSKE LKSRYGGSYV FTMTTSSEHE EDVERLVSTV SPNAKKVYHL
601: AGTQKFELPK QEVRIAEVFR AVEKAKSNFT VFAWGLADTT LEDVFIKVAK SAQAFISLS
001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS
Arabidopsis Description
ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.