Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96058 | Canola | cytosol | 98.11 | 98.11 |
| Bra004271.1-P | Field mustard | cytosol | 97.73 | 97.73 |
| AT1G67940.1 | Thale cress | cytosol | 88.64 | 88.97 |
| Solyc06g068600.2.1 | Tomato | cytosol | 54.92 | 78.38 |
| Zm00001d014611_P001 | Maize | cytosol, mitochondrion, plasma membrane | 51.52 | 72.34 |
| VIT_11s0052g00540.t01 | Wine grape | cytosol | 71.59 | 70.52 |
| KRH41857 | Soybean | plasma membrane | 68.94 | 70.0 |
| Solyc03g117810.2.1 | Tomato | cytosol | 69.7 | 69.96 |
| PGSC0003DMT400036875 | Potato | cytosol | 68.56 | 68.82 |
| EER90300 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion | 68.94 | 67.91 |
| TraesCS7B01G327900.1 | Wheat | cytosol, golgi, mitochondrion | 66.67 | 67.69 |
| TraesCS7A01G427700.1 | Wheat | cytosol | 66.67 | 67.69 |
| TraesCS4A01G414400.1 | Wheat | cytosol | 66.67 | 66.92 |
| PGSC0003DMT400074438 | Potato | extracellular | 70.83 | 66.79 |
| TraesCS7D01G420100.1 | Wheat | cytosol, golgi, mitochondrion | 66.29 | 66.54 |
| TraesCS4B01G315100.1 | Wheat | cytosol | 65.91 | 66.16 |
| TraesCS4B01G336400.1 | Wheat | cytosol, plastid | 66.29 | 61.62 |
| TraesCS4D01G332100.1 | Wheat | cytosol | 66.29 | 61.19 |
| HORVU7Hr1G098490.2 | Barley | plastid | 65.91 | 59.59 |
| HORVU4Hr1G079940.5 | Barley | cytosol | 67.8 | 57.37 |
| GSMUA_Achr7P19550_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 65.15 | 55.48 |
| Os06t0695800-01 | Rice | unclear | 68.18 | 52.02 |
| Os10t0434900-00 | Rice | cytosol, mitochondrion | 22.73 | 44.78 |
| CDX69605 | Canola | plastid | 25.0 | 24.09 |
| CDY58413 | Canola | cytosol, plastid | 24.62 | 23.72 |
| CDY16404 | Canola | plastid | 29.55 | 23.71 |
| CDY57805 | Canola | plastid | 29.55 | 23.71 |
| CDY39288 | Canola | cytosol | 13.64 | 18.18 |
| CDX68439 | Canola | nucleus | 10.61 | 17.72 |
| CDY23043 | Canola | cytosol, mitochondrion | 23.11 | 11.91 |
| CDX68436 | Canola | plasma membrane | 11.74 | 10.54 |
| CDY02120 | Canola | cytosol, nucleus, plasma membrane | 23.11 | 9.26 |
| CDX94927 | Canola | cytosol | 4.17 | 9.24 |
| CDY31786 | Canola | cytosol, nucleus, plasma membrane | 22.73 | 9.09 |
| CDY62594 | Canola | cytosol | 14.39 | 8.32 |
| CDX68438 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 12.88 | 7.98 |
| CDX68434 | Canola | plasma membrane | 20.45 | 7.61 |
| CDY64180 | Canola | plasma membrane | 17.8 | 7.5 |
| CDY36932 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 24.62 | 7.34 |
| CDX68440 | Canola | cytosol, mitochondrion | 3.79 | 7.19 |
| CDY62599 | Canola | plasma membrane | 23.11 | 7.02 |
| CDY24158 | Canola | plasma membrane | 24.62 | 7.02 |
| CDY36930 | Canola | plasma membrane | 25.0 | 7.01 |
| CDX68441 | Canola | plasma membrane | 25.0 | 7.01 |
| CDY02114 | Canola | plasma membrane | 23.48 | 6.99 |
| CDY23039 | Canola | plasma membrane | 23.48 | 6.98 |
| CDX83025 | Canola | plasma membrane | 24.62 | 6.9 |
| CDY24156 | Canola | plasma membrane | 24.24 | 6.79 |
| CDX77874 | Canola | plasma membrane | 21.21 | 6.76 |
| CDY39546 | Canola | plasma membrane | 23.86 | 6.74 |
| CDX77421 | Canola | plasma membrane | 23.86 | 6.74 |
| CDY02116 | Canola | plasma membrane | 21.21 | 6.67 |
| CDY21797 | Canola | plasma membrane | 22.73 | 6.64 |
| CDY36931 | Canola | plastid | 22.73 | 6.44 |
| CDY24157 | Canola | plastid | 23.11 | 6.41 |
| CDY24159 | Canola | golgi, mitochondrion | 21.59 | 6.08 |
| CDY36933 | Canola | golgi, mitochondrion | 21.59 | 5.91 |
| CDY52820 | Canola | cytosol, nucleus, plasma membrane | 19.32 | 5.81 |
| CDY23040 | Canola | plasma membrane | 20.83 | 5.77 |
| CDY23800 | Canola | plasma membrane | 19.32 | 5.57 |
| CDY23042 | Canola | plasma membrane | 18.56 | 5.23 |
| CDY02118 | Canola | plasma membrane | 18.56 | 4.92 |
| CDY23798 | Canola | nucleus, peroxisome, plasma membrane | 6.82 | 4.69 |
| CDY22536 | Canola | mitochondrion, plasma membrane | 23.48 | 3.35 |
| CDY35403 | Canola | mitochondrion, plasma membrane | 23.11 | 3.28 |
| CDY24573 | Canola | plasma membrane | 1.14 | 1.89 |
| CDY02115 | Canola | extracellular, mitochondrion, plasma membrane, plastid | 1.89 | 1.37 |
| CDX68435 | Canola | mitochondrion, plastid | 1.14 | 1.15 |
| CDY02119 | Canola | endoplasmic reticulum, plasma membrane, plastid | 0.76 | 1.12 |
| CDY23799 | Canola | cytosol, peroxisome, plasma membrane | 0.76 | 0.98 |
| CDY62596 | Canola | cytosol, plasma membrane, vacuole | 1.14 | 0.98 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078EQQ8 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS |
| EnsemblPlants:CDY01873 | ProteinID:CDY01873 | ProteinID:CDY01873.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005315 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0035435 | EnsemblPlantsGene:GSBRNA2T00113058001 |
| InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR43423 |
| PANTHER:PTHR43423:SF1 | InterPro:Phosp_transpt1 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI0004EE6E68 | SEG:seg |
Description
BnaC06g29130D
Coordinates
chrLK031929:-:977263..978741
Molecular Weight (calculated)
28759.0 Da
IEP (calculated)
5.030
GRAVY (calculated)
0.050
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLLLSAESD GALREHLLDV EALSGQEPKI RVRDLTRVSD DGSLILKGVS MDIPKGMIVG VIGPSGSGKS TFLRSLNRLW EPPATTVFLD GVDITSIDVI
101: TLRRRVGMLF QLPVLFEGTV ADNVRYGPNL RGEKLSDQDV YKLLSFADLD ASLAKKTGSE LSVGQAQRVA LARTLANEPE VLLLDEPTSA LDPISTENIE
201: DVIVKLKKQR GITTVIVSHS IKQIQRVADI VCLVVDGEIV EVLKPDELSQ ATHPMARRFL QLSS
101: TLRRRVGMLF QLPVLFEGTV ADNVRYGPNL RGEKLSDQDV YKLLSFADLD ASLAKKTGSE LSVGQAQRVA LARTLANEPE VLLLDEPTSA LDPISTENIE
201: DVIVKLKKQR GITTVIVSHS IKQIQRVADI VCLVVDGEIV EVLKPDELSQ ATHPMARRFL QLSS
001: MPSLWSNESD GSLREHLVDV VVSGSEPKIR VHDLTRVADD GSRILKGVTI DIPKGMIVGV IGPSGSGKST FLRSLNRLWE PPESTVFLDG EDITNVDVIA
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS
Arabidopsis Description
ABCI17Sensitive to aluminum rhizotoxicity 1 [Source:UniProtKB/TrEMBL;Acc:D6RVY5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.