Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 3
- golgi 3
- nucleus 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014611_P001 | Maize | cytosol, mitochondrion, plasma membrane | 49.03 | 80.85 |
| TraesCS7B01G327900.1 | Wheat | cytosol, golgi, mitochondrion | 63.23 | 75.38 |
| EER90300 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion | 64.84 | 75.0 |
| TraesCS7A01G427700.1 | Wheat | cytosol | 62.9 | 75.0 |
| TraesCS7D01G420100.1 | Wheat | cytosol, golgi, mitochondrion | 62.9 | 74.14 |
| Solyc06g068600.2.1 | Tomato | cytosol | 42.9 | 71.89 |
| TraesCS4B01G315100.1 | Wheat | cytosol | 59.03 | 69.58 |
| HORVU7Hr1G098490.2 | Barley | plastid | 64.52 | 68.49 |
| TraesCS4A01G414400.1 | Wheat | cytosol | 57.74 | 68.06 |
| VIT_11s0052g00540.t01 | Wine grape | cytosol | 58.39 | 67.54 |
| TraesCS4B01G336400.1 | Wheat | cytosol, plastid | 61.61 | 67.25 |
| KRH41857 | Soybean | plasma membrane | 56.13 | 66.92 |
| Solyc03g117810.2.1 | Tomato | cytosol | 56.13 | 66.16 |
| PGSC0003DMT400036875 | Potato | cytosol | 56.13 | 66.16 |
| TraesCS4D01G332100.1 | Wheat | cytosol | 60.32 | 65.38 |
| Bra004271.1-P | Field mustard | cytosol | 55.48 | 65.15 |
| CDX96058 | Canola | cytosol | 55.48 | 65.15 |
| CDY01873 | Canola | cytosol | 55.48 | 65.15 |
| AT1G67940.1 | Thale cress | cytosol | 54.84 | 64.64 |
| PGSC0003DMT400074438 | Potato | extracellular | 55.81 | 61.79 |
| Os06t0695800-01 | Rice | unclear | 68.06 | 60.98 |
| HORVU4Hr1G079940.5 | Barley | cytosol | 57.1 | 56.73 |
| Os10t0434900-00 | Rice | cytosol, mitochondrion | 23.55 | 54.48 |
| GSMUA_Achr1P08960_001 | Banana | cytosol, mitochondrion, plastid | 24.52 | 25.68 |
| GSMUA_Achr1P13520_001 | Banana | plastid | 23.23 | 23.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 7.74 | 20.0 |
| GSMUA_Achr3P20540_001 | Banana | cytosol, extracellular, nucleus | 10.0 | 18.24 |
| GSMUA_Achr8P05670_001 | Banana | plasma membrane | 22.58 | 7.45 |
| GSMUA_AchrUn_... | Banana | extracellular | 7.42 | 6.82 |
| GSMUA_Achr7P23880_001 | Banana | plasma membrane | 20.0 | 6.47 |
| GSMUA_Achr7P23890_001 | Banana | plasma membrane | 20.32 | 5.38 |
| GSMUA_Achr3P20510_001 | Banana | plasma membrane | 20.32 | 5.37 |
| GSMUA_Achr3P20560_001 | Banana | plastid | 4.52 | 4.88 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 1.94 | 1.63 |
| GSMUA_Achr3P20520_001 | Banana | plasma membrane, plastid | 2.58 | 1.31 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi, plasma membrane | 2.26 | 0.62 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005315 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0035435 | EnsemblPlantsGene:GSMUA_Achr7G19550_001 | EnsemblPlants:GSMUA_Achr7P19550_001 | EnsemblPlants:GSMUA_Achr7T19550_001 | InterPro:IPR003439 | UniProt:M0TIZ2 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR43423 | PANTHER:PTHR43423:SF1 |
| InterPro:Phosp_transpt1 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI000295EA9B | SEG:seg | : |
Description
ABC transporter I family member 17 [Source:GMGC_GENE;Acc:GSMUA_Achr7G19550_001]
Coordinates
chr7:-:22330979..22334467
Molecular Weight (calculated)
33771.3 Da
IEP (calculated)
6.523
GRAVY (calculated)
0.094
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVVTPCNLF NHSSLSLSLF LSLSLSLSNF FCSFVCILSQ NPIFGMGSAE EEVREHLLVN VDGARGLDSP AKKAKLQVRD LTKQSEATGE MILSKVNLDV
101: PEGVIVGIIG PSGSGKSTLL RALNRLWEPP SGSVLLDGQD ICKLDVLTLR RRVGMLFQLP ALFDGSVAEN VRYGPQLKGK KLTEEEVKKL LSLADLDPAF
201: ASKASSQLSV GQAQRVALAR TLANDPEVLL LDEPTSALDP ISTQNIEEAI VRLKESRRMT TVMVSHSVKQ IQRIADLVCL LVAGEMVEVL EPARLSEAQH
301: PMARRYLQLS
101: PEGVIVGIIG PSGSGKSTLL RALNRLWEPP SGSVLLDGQD ICKLDVLTLR RRVGMLFQLP ALFDGSVAEN VRYGPQLKGK KLTEEEVKKL LSLADLDPAF
201: ASKASSQLSV GQAQRVALAR TLANDPEVLL LDEPTSALDP ISTQNIEEAI VRLKESRRMT TVMVSHSVKQ IQRIADLVCL LVAGEMVEVL EPARLSEAQH
301: PMARRYLQLS
001: MPSLWSNESD GSLREHLVDV VVSGSEPKIR VHDLTRVADD GSRILKGVTI DIPKGMIVGV IGPSGSGKST FLRSLNRLWE PPESTVFLDG EDITNVDVIA
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS
Arabidopsis Description
ABCI17Sensitive to aluminum rhizotoxicity 1 [Source:UniProtKB/TrEMBL;Acc:D6RVY5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.