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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400074438 Potato extracellular 97.3 64.29
Solyc03g117810.2.1 Tomato cytosol 88.65 62.36
Zm00001d014611_P001 Maize cytosol, mitochondrion, plasma membrane 62.7 61.7
VIT_11s0052g00540.t01 Wine grape cytosol 85.41 58.96
CDX96058 Canola cytosol 79.46 55.68
Bra004271.1-P Field mustard cytosol 79.46 55.68
AT1G67940.1 Thale cress cytosol 78.38 55.13
CDY01873 Canola cytosol 78.38 54.92
KRH41857 Soybean plasma membrane 76.76 54.62
TraesCS7A01G427700.1 Wheat cytosol 71.89 51.15
TraesCS7B01G327900.1 Wheat cytosol, golgi, mitochondrion 71.35 50.77
TraesCS7D01G420100.1 Wheat cytosol, golgi, mitochondrion 70.81 49.81
EER90300 Sorghum cytosol, endoplasmic reticulum, mitochondrion 71.89 49.63
TraesCS4B01G315100.1 Wheat cytosol 69.73 49.05
TraesCS4A01G414400.1 Wheat cytosol 67.57 47.53
TraesCS4B01G336400.1 Wheat cytosol, plastid 69.73 45.42
HORVU7Hr1G098490.2 Barley plastid 70.81 44.86
TraesCS4D01G332100.1 Wheat cytosol 68.11 44.06
GSMUA_Achr7P19550_001 Banana endoplasmic reticulum, extracellular, vacuole 71.89 42.9
HORVU4Hr1G079940.5 Barley cytosol 68.11 40.38
Os06t0695800-01 Rice unclear 71.89 38.44
Os10t0434900-00 Rice cytosol, mitochondrion 15.14 20.9
Solyc02g068180.2.1 Tomato plastid 27.57 18.61
Solyc04g056650.2.1 Tomato plastid 28.65 15.14
Solyc03g113080.2.1 Tomato cytosol 18.38 9.5
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 23.78 6.9
Solyc06g070950.1.1 Tomato plasma membrane 24.32 5.05
Solyc03g113040.2.1 Tomato plastid 25.41 4.97
Solyc03g113060.2.1 Tomato extracellular 24.86 4.87
Solyc06g070960.1.1 Tomato plasma membrane 21.08 4.21
Solyc06g070940.2.1 Tomato plasma membrane 20.0 3.92
Solyc04g015970.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 23.78 2.3
Solyc06g070930.2.1 Tomato plastid 0.0 0.0
Solyc03g113070.2.1 Tomato plasma membrane 0.0 0.0
Protein Annotations
Gene3D:3.40.50.300MapMan:35.1InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005315GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016787GO:GO:0016887GO:GO:0035435
InterPro:IPR003439UniProt:K4C834InterPro:P-loop_NTPasePFAM:PF00005ScanProsite:PS00211PFscan:PS50893
PANTHER:PTHR43423PANTHER:PTHR43423:SF1InterPro:Phosp_transpt1SUPFAM:SSF52540EnsemblPlantsGene:Solyc06g068600.2EnsemblPlants:Solyc06g068600.2.1
UniParc:UPI0002766584:::::
Description
No Description!
Coordinates
chr6:-:42520765..42522075
Molecular Weight (calculated)
20390.1 Da
IEP (calculated)
5.324
GRAVY (calculated)
0.072
Length
185 amino acids
Sequence
(BLAST)
001: MGTPKGTVFL DGTDICDLDV LCLRRKVGML FQLPVLFEGT VADNIRYGPK LKGKKLSDNE VYKLLTLADL DSSFFNKSGG ELSVGQAQRV ALARTLANEP
101: EVLLLDEPTS ALDPISTQNI EDVLVKLKKD QKMTIVIVSH SIKQIQRIAD IVCLLVDGEI VEIIKPDQLS EAKHPMALRF LQLSS
Best Arabidopsis Sequence Match ( AT1G67940.1 )
(BLAST)
001: MPSLWSNESD GSLREHLVDV VVSGSEPKIR VHDLTRVADD GSRILKGVTI DIPKGMIVGV IGPSGSGKST FLRSLNRLWE PPESTVFLDG EDITNVDVIA
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS
Arabidopsis Description
ABCI17Sensitive to aluminum rhizotoxicity 1 [Source:UniProtKB/TrEMBL;Acc:D6RVY5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.