Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- extracellular 2
- plasma membrane 4
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038152.1-P | Field mustard | plasma membrane, vacuole | 38.89 | 54.63 |
| Solyc06g070940.2.1 | Tomato | plasma membrane | 63.89 | 39.02 |
| Solyc06g070960.1.1 | Tomato | plasma membrane | 54.86 | 34.13 |
| Solyc03g113040.2.1 | Tomato | plastid | 23.09 | 14.07 |
| Solyc03g113060.2.1 | Tomato | extracellular | 22.22 | 13.56 |
| Solyc06g070950.1.1 | Tomato | plasma membrane | 20.49 | 13.24 |
| Solyc06g070920.2.1 | Tomato | extracellular, plasma membrane | 14.24 | 12.85 |
| Solyc06g070930.2.1 | Tomato | plastid | 4.86 | 10.22 |
| VIT_08s0007g08730.t01 | Wine grape | mitochondrion, plasma membrane | 22.4 | 6.86 |
| AT2G41700.1 | Thale cress | mitochondrion, plasma membrane | 21.88 | 6.7 |
| Bra000236.1-P | Field mustard | mitochondrion | 20.49 | 6.41 |
| Solyc04g015970.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 21.18 | 6.39 |
| CDY22536 | Canola | mitochondrion, plasma membrane | 20.49 | 6.37 |
| CDY35403 | Canola | mitochondrion, plasma membrane | 20.49 | 6.34 |
| Solyc04g056650.2.1 | Tomato | plastid | 3.65 | 6.0 |
| KRH66908 | Soybean | cytosol | 18.58 | 5.86 |
| Solyc02g068180.2.1 | Tomato | plastid | 2.26 | 4.74 |
| Solyc03g117810.2.1 | Tomato | cytosol | 1.74 | 3.8 |
| Solyc03g113080.2.1 | Tomato | cytosol | 0.35 | 0.56 |
| Solyc06g068600.2.1 | Tomato | cytosol | 0.0 | 0.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc03g113070.2.1 | EnsemblPlantsGene:Solyc03g113070.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR45592 |
| PFAM:PF12698 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002767A2F | UniProt:K4BKG0 | MapMan:5.8.5 |
Description
No Description!
Coordinates
chr3:+:63366685..63372042
Molecular Weight (calculated)
65028.2 Da
IEP (calculated)
7.978
GRAVY (calculated)
0.275
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVQRGFPLL KQQYKALIKK NFLVAWRNKM ATFLQLCASL FFIFLLFIIQ RAIEARFSSS TSYKDVRDPE PLLSPPIPPC EDKNFIAFPC YDFIWSGSQS
101: PKISQIVNGI MANNPGRSIP SSKVLSFRTR DEVDDWLFKN PMRCPGALHF VERNASVISY GIQTNSTPVA NRGVFEDPTF TFQIPLQLAA EREIARSLIG
201: DPNFSWVVSL KEFAHPAFEV FSALRTIGPT FFLAVAMFGF VFQINALIIE KELKLRQAMT MMGLYDTAYW LSWFTWEGFI TLLSSLLTVL FGMMFQFDFF
301: LNNNFAVVFL LFFLFQLNMV GFAYMVSAFI SKSSSTTTVG FFIFIVGFMT QLVTAFGFPY SENYSKSYRI IWSLFPPNLL AQGLQLLAGA TATPEDPGVS
401: WSGRTKCAFN DTECVITMNE IYIWLVVTFF LWFVLAIYLD NIIPNISGVR KSAFYFLTPG YWTGKSGNKV KEGSVCSCTG SVPALDSIIP DDEDVLEEEN
501: IVKQQAMQGE VNSNVAVQLH GLVKIFPGTT KMGCCKCERK SPFHAIKGLW VNLAKDQLFC LLGPNGAGKN YYYLIV
101: PKISQIVNGI MANNPGRSIP SSKVLSFRTR DEVDDWLFKN PMRCPGALHF VERNASVISY GIQTNSTPVA NRGVFEDPTF TFQIPLQLAA EREIARSLIG
201: DPNFSWVVSL KEFAHPAFEV FSALRTIGPT FFLAVAMFGF VFQINALIIE KELKLRQAMT MMGLYDTAYW LSWFTWEGFI TLLSSLLTVL FGMMFQFDFF
301: LNNNFAVVFL LFFLFQLNMV GFAYMVSAFI SKSSSTTTVG FFIFIVGFMT QLVTAFGFPY SENYSKSYRI IWSLFPPNLL AQGLQLLAGA TATPEDPGVS
401: WSGRTKCAFN DTECVITMNE IYIWLVVTFF LWFVLAIYLD NIIPNISGVR KSAFYFLTPG YWTGKSGNKV KEGSVCSCTG SVPALDSIIP DDEDVLEEEN
501: IVKQQAMQGE VNSNVAVQLH GLVKIFPGTT KMGCCKCERK SPFHAIKGLW VNLAKDQLFC LLGPNGAGKN YYYLIV
001: MTLQRGLPLL LQQYTALFKK NLLLSWRSKR ATFLQLFASF FFILLIFCIQ AAMEKSFASS TALKTVTDPT ALISPPIPPC EDKFFVNLPC YDFVWSGNRS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS
Arabidopsis Description
ABCA2ATH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6R6]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.