Factsheet for Solyc03g113040.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
endoplasmic reticulum 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g113060.2.1	Tomato	extracellular	84.02	84.11
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	75.87	75.55
KRH54520	Soybean	plasma membrane, plastid	64.13	75.09
CDX94927	Canola	cytosol	9.31	73.95
KRH63384	Soybean	plasma membrane	55.77	72.39
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	37.04	71.28
CDY02120	Canola	cytosol, nucleus, plasma membrane	48.36	69.35
VIT_12s0055g00730.t01	Wine grape	extracellular	9.31	69.29
CDY31786	Canola	cytosol, nucleus, plasma membrane	47.83	68.48
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	46.14	68.34
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.97	67.57
KRH56933	Soybean	plasma membrane, plastid	67.62	67.33
AT3G47780.1	Thale cress	plasma membrane	66.45	67.17
CDY24156	Canola	plasma membrane	66.67	66.88
AT3G47790.1	Thale cress	plasma membrane	63.7	66.81
Bra018113.1-P	Field mustard	plasma membrane	66.56	66.77
CDY36930	Canola	plasma membrane	66.45	66.67
CDX83025	Canola	plasma membrane	65.93	66.14
KRH03450	Soybean	plasma membrane, plastid	66.56	65.93
Bra033785.1-P	Field mustard	plasma membrane	65.71	65.92
Bra019513.1-P	Field mustard	plasma membrane	62.12	65.73
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	60.85	64.9
CDY21797	Canola	plasma membrane	62.01	64.82
AT5G61700.1	Thale cress	plasma membrane	62.65	64.56
CDX68441	Canola	plasma membrane	64.13	64.33
CDX77874	Canola	plasma membrane	56.4	64.29
CDY24158	Canola	plasma membrane	62.86	64.15
AT3G47740.1	Thale cress	plasma membrane	63.17	64.06
Bra018115.1-P	Field mustard	plasma membrane	62.75	64.04
AT3G47760.3	Thale cress	plasma membrane	63.39	64.0
TraesCS1A01G343000.1	Wheat	plasma membrane	64.44	63.9
TraesCS1D01G345200.1	Wheat	plasma membrane	64.34	63.87
CDX77421	Canola	plasma membrane	62.86	63.53
AT5G61740.1	Thale cress	plasma membrane	61.06	63.48
TraesCS1B01G356200.1	Wheat	plasma membrane	63.92	63.45
CDY39546	Canola	plasma membrane	62.54	63.21
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	62.65	63.18
Os08t0398300-01	Rice	plasma membrane	63.92	63.11
KXG25097	Sorghum	plasma membrane	63.92	63.05
Bra015049.1-P	Field mustard	plasma membrane	59.58	63.05
HORVU1Hr1G075620.5	Barley	plasma membrane	63.49	62.89
TraesCS7A01G367700.1	Wheat	plasma membrane	37.78	62.85
CDY62599	Canola	plasma membrane	57.78	62.83
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	61.27	62.53
HORVU4Hr1G087670.8	Barley	mitochondrion	63.49	62.5
TraesCS5D01G195700.1	Wheat	plasma membrane	62.54	62.47
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.05	62.33
TraesCS5A01G193200.1	Wheat	plasma membrane	62.33	62.26
CDY23043	Canola	cytosol, mitochondrion	33.65	62.11
CDY36931	Canola	plastid	60.74	61.65
CDY24157	Canola	plastid	62.01	61.62
CDY02114	Canola	plasma membrane	57.46	61.22
OQU89360	Sorghum	plasma membrane	61.16	60.97
TraesCS5B01G188600.1	Wheat	plasma membrane	60.95	60.63
Zm00001d050259_P002	Maize	plasma membrane	63.07	60.57
CDY23039	Canola	plasma membrane	56.83	60.47
TraesCS4B01G365000.1	Wheat	plasma membrane	62.96	60.47
Zm00001d020208_P003	Maize	plasma membrane	60.32	60.13
HORVU5Hr1G056930.20	Barley	plasma membrane	61.59	59.57
TraesCSU01G138200.1	Wheat	plasma membrane	62.54	59.22
Solyc06g070950.1.1	Tomato	plasma membrane	55.77	59.15
TraesCS5A01G534100.3	Wheat	cytosol	62.65	58.61
CDY23798	Canola	nucleus, peroxisome, plasma membrane	23.81	58.59
Os06t0589300-01	Rice	plasma membrane	58.31	58.06
TraesCS7D01G355100.1	Wheat	plastid	58.2	57.59
CDX68440	Canola	cytosol, mitochondrion	8.47	57.55
TraesCS3D01G368700.2	Wheat	plasma membrane	58.73	57.33
TraesCS7B01G260800.1	Wheat	plastid	57.99	57.32
Bra012927.1-P	Field mustard	cytosol	36.93	56.75
EER89983	Sorghum	plastid	57.14	56.6
Zm00001d036927_P001	Maize	plasma membrane, plastid	56.93	55.75
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	58.2	55.5
GSMUA_Achr7P23890_001	Banana	plasma membrane	68.68	55.47
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	17.46	55.37
GSMUA_Achr3P20510_001	Banana	plasma membrane	64.34	51.83
VIT_18s0041g02240.t01	Wine grape	plasma membrane	38.84	49.86
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	22.33	49.53
CDX68439	Canola	nucleus	7.83	46.84
Solyc06g070930.2.1	Tomato	plastid	12.28	42.34
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	7.51	42.26
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	7.51	42.26
HORVU4Hr1G039510.1	Barley	cytosol	7.2	40.48
Solyc03g113080.2.1	Tomato	cytosol	10.69	28.21
Solyc06g068600.2.1	Tomato	cytosol	4.97	25.41
Solyc06g070940.2.1	Tomato	plasma membrane	24.76	24.81
Solyc06g070960.1.1	Tomato	plasma membrane	24.13	24.62
Solyc02g068180.2.1	Tomato	plastid	7.09	24.45
Solyc04g056650.2.1	Tomato	plastid	8.68	23.43
Solyc03g117810.2.1	Tomato	cytosol	6.46	23.19
Solyc03g113070.2.1	Tomato	plasma membrane	14.07	23.09
Solyc04g015970.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	21.16	10.48

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0043231
GO:GO:0055085	InterPro:IPR003439	UniProt:K4BKF7	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382	SUPFAM:SSF52540
EnsemblPlantsGene:Solyc03g113040.2	EnsemblPlants:Solyc03g113040.2.1	TMHMM:TMhelix	UniParc:UPI0002767A2C	SEG:seg	:

Description

No Description!

Coordinates

chr3:-:63336012..63344282

Molecular Weight (calculated)

106367.0 Da

IEP (calculated)

7.724

GRAVY (calculated)

-0.030

Length

945 amino acids

Sequence
(BLAST)

001: MAGSVHGPAS FSTQANALLR KNLTFQKREV RSNIRLILVP VILCVLLVLI QVLVNNELDK PSNNCGCKCI DQNGDGTCEQ VCGIEYSDLS QVGRCPIPSP
101: PEWPPLLQIP APEYRAVRTD FTSFGDLPDD SCRISGSCPA TILMTGTNQT FGESMRRNLF SSTGSTLNSS DIFYSLANNV LGSDSPTEVM NFLESAFFSD
201: LPVYNVQSQC SPNSTFSIPL DIGTTNIRQE ISCLKGLHLW RNSSDEINDE LYKGYRKGNP EEKINEIIAA YDFLNSDRHS FNVIIWYNST YKNDTGNQPI
301: ALTRVPRSVN LASNAYLQFL LGPSAKMLFE FVKEMPKPET KLRLDFASLL GPLFFTWVVS QLFPVVLIAL VYEKEQKLRI MMKMHGLADV PYWMISYAYF
401: LVISTIYMFC FVIFGSLVGL KFFLVNDYSI QFVFYFIYIN LQVALAFLVA AFFSNVKTAT VIGYMMVFAN GLLASFLFQF FLQDNSFPRG WIIVMELYPG
501: FSLFRGLYEF SYYAFVGNYM GTDGMRWKDL GDGKNGMKEV LIIMIVQWLV FLVLAYYIDQ ITSSGKDPLF FLRNFRKKSS HPIRKLSLSR EETKVFVQME
601: KPDVSQERER VEQLLESNTG HAIICDNLKK VYPGRDGNPE KFAVRGLSLA LPQGECFGML GPNGAGKTTF ISMMIGLIKP SSGTAYAQGM DIRTDMDMIY
701: TNMGVCPQHD LLWEKLTGRE HLLFYGRLKN LKGAVLTQAV EESLKSVNLF HGGVADKQSG KYSGGMKRRL SVAISLIGDP KVVYMDEPST GLDPASRNNL
801: WNVVKRAKKD RAIILTTHSM EEAEHLCDRL GIFVDGNLQC VGNAKELKAR YGGSYVFTMT TSSDKEEEVE QMVRRLSPNA NRIYHLSGTQ KFELPKHEVR
901: IADVFDAVEK AKSRFTVYAW GLADTTLEDV FIKVARTAQA FNVLS

Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)

001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS

Arabidopsis Description

ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.