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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018115.1-P Field mustard plasma membrane 96.44 96.44
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 92.22 96.39
CDX94927 Canola cytosol 11.88 92.44
AT3G47750.1 Thale cress mitochondrion, plasma membrane 78.94 78.01
AT3G47760.3 Thale cress plasma membrane 78.73 77.88
CDY36930 Canola plasma membrane 76.03 74.73
CDX77421 Canola plasma membrane 75.38 74.65
CDY24156 Canola plasma membrane 75.81 74.52
CDY39546 Canola plasma membrane 74.95 74.22
CDY36931 Canola plastid 74.62 74.22
CDY24157 Canola plastid 76.13 74.13
CDY02120 Canola cytosol, nucleus, plasma membrane 52.7 74.05
CDX68440 Canola cytosol, mitochondrion 11.02 73.38
CDY31786 Canola cytosol, nucleus, plasma membrane 52.27 73.33
CDX68441 Canola plasma membrane 74.19 72.93
CDX83025 Canola plasma membrane 73.76 72.51
KRH54520 Soybean plasma membrane, plastid 58.53 67.16
CDY62599 Canola plasma membrane 62.2 66.28
CDY23043 Canola cytosol, mitochondrion 36.39 65.82
CDY02114 Canola plasma membrane 62.74 65.5
CDY23039 Canola plasma membrane 62.53 65.2
CDY24573 Canola plasma membrane 10.91 63.52
CDY21797 Canola plasma membrane 61.99 63.5
Solyc03g113040.2.1 Tomato plastid 64.15 62.86
KRH63384 Soybean plasma membrane 49.24 62.64
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 42.98 62.38
CDX77874 Canola plasma membrane 55.83 62.36
CDY23798 Canola nucleus, peroxisome, plasma membrane 25.7 61.98
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 32.4 61.1
Solyc03g113060.2.1 Tomato extracellular 61.56 60.38
TraesCS7A01G367700.1 Wheat plasma membrane 36.5 59.51
KRH56933 Soybean plasma membrane, plastid 60.69 59.22
KRH03450 Soybean plasma membrane, plastid 60.37 58.6
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 26.24 57.04
TraesCS1D01G345200.1 Wheat plasma membrane 57.88 56.3
TraesCS1A01G343000.1 Wheat plasma membrane 57.88 56.24
TraesCS1B01G356200.1 Wheat plasma membrane 57.67 56.09
KXG25097 Sorghum plasma membrane 57.34 55.43
Os08t0398300-01 Rice plasma membrane 56.91 55.07
HORVU1Hr1G075620.5 Barley plasma membrane 55.94 54.3
HORVU4Hr1G087670.8 Barley mitochondrion 56.16 54.17
OQU89360 Sorghum plasma membrane 54.97 53.69
Zm00001d020208_P003 Maize plasma membrane 54.86 53.59
TraesCS4B01G365000.1 Wheat plasma membrane 56.7 53.35
Zm00001d050259_P002 Maize plasma membrane 56.7 53.35
TraesCS5D01G195700.1 Wheat plasma membrane 54.43 53.28
TraesCS5A01G193200.1 Wheat plasma membrane 54.21 53.07
Solyc06g070950.1.1 Tomato plasma membrane 50.76 52.75
TraesCSU01G138200.1 Wheat plasma membrane 56.26 52.2
TraesCS5A01G534100.3 Wheat cytosol 56.59 51.88
HORVU5Hr1G056930.20 Barley plasma membrane 54.64 51.79
TraesCS3D01G368700.2 Wheat plasma membrane 54.1 51.76
TraesCS5B01G188600.1 Wheat plasma membrane 53.02 51.68
TraesCS7D01G355100.1 Wheat plastid 53.24 51.62
Os06t0589300-01 Rice plasma membrane 52.81 51.53
EER89983 Sorghum plastid 53.02 51.47
TraesCS7B01G260800.1 Wheat plastid 53.02 51.36
Zm00001d036927_P001 Maize plasma membrane, plastid 53.13 50.98
CDX68439 Canola nucleus 8.53 50.0
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 53.13 49.65
GSMUA_Achr7P23890_001 Banana plasma membrane 58.75 46.5
GSMUA_Achr3P20510_001 Banana plasma membrane 56.91 44.93
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 8.64 44.69
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 7.34 40.48
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 7.24 39.88
CDY23799 Canola cytosol, peroxisome, plasma membrane 8.75 39.71
HORVU4Hr1G039510.1 Barley cytosol 6.91 38.1
Solyc06g070930.2.1 Tomato plastid 11.23 37.96
CDY64180 Canola plasma membrane 17.06 25.2
CDX96058 Canola cytosol 7.13 25.0
CDY01873 Canola cytosol 7.02 24.62
CDY16404 Canola plastid 8.75 24.62
CDY62594 Canola cytosol 11.99 24.29
CDY57805 Canola plastid 8.53 24.01
CDY24159 Canola golgi, mitochondrion 24.19 23.91
CDY02116 Canola plasma membrane 21.49 23.69
CDY23040 Canola plasma membrane 24.19 23.48
CDY23800 Canola plasma membrane 22.89 23.17
CDY36933 Canola golgi, mitochondrion 24.08 23.11
CDY23042 Canola plasma membrane 23.33 23.05
CDY52820 Canola cytosol, nucleus, plasma membrane 21.81 23.01
CDX69605 Canola plastid 6.8 22.99
CDY58413 Canola cytosol, plastid 6.8 22.99
CDX68436 Canola plasma membrane 7.13 22.45
CDY02118 Canola plasma membrane 23.33 21.71
CDX68434 Canola plasma membrane 16.52 21.55
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 8.1 20.55
CDY62596 Canola cytosol, plasma membrane, vacuole 6.48 19.54
CDX68435 Canola mitochondrion, plastid 5.29 18.77
CDY39288 Canola cytosol 3.56 16.67
CDY22536 Canola mitochondrion, plasma membrane 20.41 10.2
CDY35403 Canola mitochondrion, plasma membrane 20.41 10.16
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078GHQ5UniProt:A0A078GHQ5InterPro:AAA+_ATPaseInterPro:ABCA
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY24158ProteinID:CDY24158ProteinID:CDY24158.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00024764001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF12698ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EDCD85SEG:seg::
Description
BnaC03g57190DBnaC03g57190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHQ5]
Coordinates
chrLK032154:-:370076..374233
Molecular Weight (calculated)
104238.0 Da
IEP (calculated)
9.301
GRAVY (calculated)
-0.025
Length
926 amino acids
Sequence
(BLAST)
001: MADLVPASFL TQANALSRKN LAYQRRNLWS NVRLIVIPLY LCVLLVSIQA LFDTQVNNSP DNRCGCQCID DKNRDGICDK KGCGLEYSSQ KQALFCAFPK
101: PPLLPPLVQI PRPKTPSDSC RRLNGSCPVT TLVTGNNLSL GAALSRNMLT TSFTVNSSVL WLRNPAINVL GTTSEPDFTN YFDPGIHSNL PIFNIQPQCT
201: PRTTFSFSFG QSPQKFRNEV RCVQGLSLWR NSSIDVSHEI LKGYQKGNHE EVINEVAAAY DLLDTDRKKL NVTIWYNSTS KTKLLERRVK LVRVPRSVNL
301: ISNAYLQYLK GRGTEILFEF VKEMPKVETW LRVDVASSIG PIFFTWVILL LFPVVLNTLV YEKQQRLRII MKMHGLGDGP YWMISYAYFL SISTLYVICL
401: MIFGSVIGLK FFRVNNYSIQ FLFYFIYINL QISIAFLVSS AFSKVKTSSV VAYIYVFGSG LLGAFLFQFL MEDPSFPRRW IFFMEVYPGF SLYRGLYEFS
501: EYALNRKDGM KWDDFSNSGM DEVFYIIIIE WFVLLIAAYY IDKISSSGKD PLFFLKNPFK FLPRPSLQKQ GSVVSAEMEK LDVAQEREKV DQLMMLEPTT
601: RYAIVCDNLK KMYPGRDGNQ PKIAVHGLSL AVPSGECFGM LGPNGAGKTS FINMMTGLVK PSSGTAFVRG LDICKDMDRA YTSMGVCPQH DLLWETLTGR
701: EHLLFYGRLK NLKGSDLNQA VEESLKSVNL SRGGVGDKPA GKYSGGMKRR LSVAISLIGG PKVVYMDEPS TGLDPASRMN LWTVIKRAKT NTAIILTTHS
801: MEEAEFLCDR LGIFVDGRLQ CIGNPKELKG RYGGSYVFTM TTSSEHEKDV EMLVKDVSPN AKKIYHIGGT QKFEIPKGEV RISEVFQAVE KAKSSFKVFA
901: WGLADTTLED VFIKVARTAQ AFNVLS
Best Arabidopsis Sequence Match ( AT3G47750.1 )
(BLAST)
001: MANHVPASFL TRANALFRKN LTYQKRNIWS NVRLIVIPFY LCVLLVGIQV LFDTQVNNSA DNRCGCRCIH KNGDGKCERK SCGLQYSSLT QASFCAFPNP
101: PPLLPLLQIP RPETRLVDPA RSSCRRTGSC PVTILVTGNN HTLGETLSRN LLSTSFAVNS SDHFLRNLAY NVLGTISEAD YTNYLDPGIH SDLPIFQIRP
201: YCTPTTNLSF SFRQPPITFH KEVRCVQGLN LWRNNSVEVN DEIFKGYRQG NHEEIINEVA AAYDLLDTDR NKFNVTIWYN SSYKGNFKVQ DRRVKYVRVP
301: RSVNMVSNAY LRFLRGPGTK MLFDFVKEMP KQESMLRVDI ASVIGPIFLT WVIVLLFPVI LNSLVYEKQQ HLRIIMKMHG LGDGPYWMIT YAYFLAISTL
401: YIICLMIFGS AIGLKFFRFN DYSIQFIFYF LCINLQISIA FLVSSAFSKV ETASVAAYLY VFGSGLLGGF LFQFMLEGLS FPRGWIFVME LYPGFSLYRG
501: LYEFSQYALK RQLNGSDGMK WKYFSDSAMD EVFYIIIIEW FLALIAAYYM DRVSSSAKDP FLFLKNLIKK SPSPQRHSLQ RLGSSVSVEM EKLDVVEERA
601: KVEQLMLESS TSHAIVCDKL KKVYPGRDGN PPKMAVGGLS IAVPPGECFG MLGPNGAGKT SFINMMTGLV KPTSGTALVE SLDICQDMDK VYTSMGVCPQ
701: HDLLWETLTG REHLLFYGRL KNLKGSDLNQ AIEESLKSVN LSREGVADKP AGKYSGGMKR RLSVAISLIG SPKVVYMDEP STGLDPASRR SLWTAIKGAK
801: KHTAIILTTH SMEEAEFLCD RLGIFVDGRL QCVGNPKELK ARYGGSYVLT MTTSSEHEKD VEMLIQDVSP NAKKIYHIAG TQKFEIPKDE VRIAELFQAV
901: EKAKGNFRVF AWGLADTTLE DVFIKVARTA QASNVFS
Arabidopsis Description
ABCA4ABC transporter A family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT8]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.