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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion
Any Predictor:golgi, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36933 Canola golgi, mitochondrion 98.4 95.54
Bra018116.1-P Field mustard golgi, mitochondrion 98.51 93.61
AT3G47730.1 Thale cress mitochondrion, plasma membrane 90.18 85.96
CDX68435 Canola mitochondrion, plastid 23.8 85.44
CDX68434 Canola plasma membrane 59.45 78.45
CDY64180 Canola plasma membrane 50.27 75.12
CDY02116 Canola plasma membrane 65.74 73.33
CDY62594 Canola cytosol 35.54 72.87
CDY23040 Canola plasma membrane 73.53 72.22
CDY23042 Canola plasma membrane 71.83 71.83
CDY23800 Canola plasma membrane 69.16 70.82
VIT_17s0000g05850.t01 Wine grape plasma membrane 71.72 70.15
CDY52820 Canola cytosol, nucleus, plasma membrane 65.42 69.82
CDY02118 Canola plasma membrane 72.36 68.14
PGSC0003DMT400046727 Potato plasma membrane 67.45 67.67
GSMUA_Achr3P20540_001 Banana cytosol, extracellular, nucleus 12.17 67.06
KRH54517 Soybean plasma membrane 68.41 66.29
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 25.4 65.21
GSMUA_Achr7P23880_001 Banana plasma membrane 66.28 64.82
EES14950 Sorghum mitochondrion, plasma membrane, plastid 66.06 64.41
TraesCS1B01G356100.2 Wheat plasma membrane 66.17 64.32
KRH63387 Soybean plasma membrane, plastid 65.96 64.24
TraesCS1A01G342900.2 Wheat plasma membrane 66.06 64.08
TraesCS1D01G345100.2 Wheat mitochondrion, plasma membrane, plastid 65.85 63.94
Zm00001d032279_P005 Maize golgi, plastid 65.64 63.4
Os08t0398000-01 Rice plasma membrane 65.31 63.22
HORVU1Hr1G075640.9 Barley golgi 64.89 62.1
CDY62596 Canola cytosol, plasma membrane, vacuole 20.17 61.56
GSMUA_Achr3P20560_001 Banana plastid 18.25 59.58
Solyc06g070960.1.1 Tomato plasma membrane 56.46 57.13
CDX68439 Canola nucleus 5.23 31.01
CDY02120 Canola cytosol, nucleus, plasma membrane 21.66 30.8
CDY31786 Canola cytosol, nucleus, plasma membrane 21.66 30.76
CDY23043 Canola cytosol, mitochondrion 16.33 29.88
CDX94927 Canola cytosol 3.63 28.57
CDX77874 Canola plasma membrane 23.37 26.42
CDY21797 Canola plasma membrane 24.76 25.66
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 24.01 25.39
CDY02114 Canola plasma membrane 23.91 25.25
CDY62599 Canola plasma membrane 23.37 25.2
CDY23039 Canola plasma membrane 23.59 24.89
CDY24573 Canola plasma membrane 4.16 24.53
CDY36930 Canola plasma membrane 24.44 24.31
CDY24156 Canola plasma membrane 24.33 24.2
CDY24158 Canola plasma membrane 23.91 24.19
CDY36931 Canola plastid 23.8 23.95
CDY24157 Canola plastid 24.12 23.76
CDY58413 Canola cytosol, plastid 6.94 23.72
CDY23798 Canola nucleus, peroxisome, plasma membrane 9.71 23.7
CDX83025 Canola plasma membrane 23.69 23.57
CDX69605 Canola plastid 6.83 23.36
CDX68441 Canola plasma membrane 23.16 23.04
CDY39546 Canola plasma membrane 22.95 22.99
CDX77421 Canola plasma membrane 22.95 22.99
CDX68440 Canola cytosol, mitochondrion 3.31 22.3
CDY16404 Canola plastid 7.79 22.19
CDY57805 Canola plastid 7.68 21.88
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 9.82 21.6
CDY01873 Canola cytosol 6.08 21.59
CDX96058 Canola cytosol 5.98 21.21
CDX68436 Canola plasma membrane 5.66 18.03
CDY39288 Canola cytosol 3.31 15.66
CDY22536 Canola mitochondrion, plasma membrane 26.36 13.33
CDY35403 Canola mitochondrion, plasma membrane 26.25 13.23
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 2.24 11.73
CDY23799 Canola cytosol, peroxisome, plasma membrane 2.24 10.29
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300MapMan:5.8.5GO:A0A078GFQ7UniProt:A0A078GFQ7InterPro:AAA+_ATPase
InterPro:ABCAInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY24159ProteinID:CDY24159ProteinID:CDY24159.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00024765001InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF12698ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF193
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EDDD27SEG:seg:
Description
BnaC03g57180DBnaC03g57180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFQ7]
Coordinates
chrLK032154:+:385678..390239
Molecular Weight (calculated)
103237.0 Da
IEP (calculated)
6.520
GRAVY (calculated)
0.062
Length
937 amino acids
Sequence
(BLAST)
001: MTLQRGLALL WQQYTALFRK NLLLSWRSKR ATFLQLFASF FFILLIFCIQ EAMEKSFASS TALKTVTDPS ALVSPPIPPC EDKDIVNAIR ANNPGRPIPE
101: DKVLQFKSPL EVDAWLMANP LQTPGALHFM DRNATVMSYG IQTNSTPEMN RGRFEDPTFK FQIPLQVAAE REIARSLIGD PKFNWVVGFK EFPHPTIEAV
201: VALDTIGPTF FLAIAMFGFV LQISSLITEK ELKLRQAMTM MGVFDTAYWL SWLTWEGILT TVSALLVVLF GMMFQFDFFL KNSFPVVFLL FMLFQLNMIG
301: VAFMLSAFIS KSSSATTVGF FVFLVGFVTQ LGASSGFPYA KKYSQTIRTL WSLFPPNAFS QGLKMLSDAT STPQDPGISW SKRAVCGPND DTDCVITIND
401: IYLWLLGTFF LWFVLALYFD NIVPNASGVR KSVFYFLKPG YWTGRGGNRV EEGGICSCTG SAPRVDHITP DDEDVLEEET LVKQHSIEGL VDPNIAVQIR
501: GLAKTYPGTT NFGCCKCKKT PAYHALKGLW MNIAKDQLFC LLGPNGAGKT TTINCLTGIN PVTGGDALIY GNSIRSSVGM SNIRKMIGVC PQFDILWDAL
601: SGEEHLRLFA SIKGLPPASI NPMVEKSLAE VKLTEAGKIR AGSYSGGMKR RLSVAVSLIG DPKLVFLDEP TTGMDPITRR HVWDIIQETK KGRAIILTTH
701: SMEEADILSD RIGIMAKGRL RCIGTSIRLK SRFGTGFIAN ISFTESNNQE NNGNGEAAGA AESREPVKKF FKDHLNVKPV EENKAFMTFV IPHDKENLLT
801: RFFAELQDRE AEFGISDIQL GLATLEEVFL NIARKAELES AAVDGTMVTL ELTSGPSVEI PVGARFVGIP GTENAENPRG VMVEVYWQQD ESGSLCISGH
901: STEMPVPDNV PATDPVAPGH GGVSFRSGSF ASQRSSL
Best Arabidopsis Sequence Match ( AT3G47730.1 )
(BLAST)
001: MTLQRGLPLL LQQYTALFKK NLLLSWRSKR ATFLQLFASF FFILLIFCIQ AAMEKSFASS TALKTVTDPT ALISPPIPPC EDKFFVNLPC YDFVWSGNRS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS
Arabidopsis Description
ABCA2ATH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6R6]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.