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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • endoplasmic reticulum 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36930 Canola plasma membrane 97.03 97.03
CDX94927 Canola cytosol 11.04 87.39
CDX83025 Canola plasma membrane 86.31 86.31
CDX68441 Canola plasma membrane 86.09 86.09
AT3G47780.1 Thale cress plasma membrane 84.29 84.92
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 72.19 76.75
CDY02120 Canola cytosol, nucleus, plasma membrane 53.08 75.87
CDY24158 Canola plasma membrane 74.52 75.81
CDX77421 Canola plasma membrane 75.05 75.61
CDY39546 Canola plasma membrane 74.84 75.4
CDY31786 Canola cytosol, nucleus, plasma membrane 52.65 75.15
CDY24157 Canola plastid 73.46 72.77
CDY36931 Canola plastid 71.66 72.5
CDX68440 Canola cytosol, mitochondrion 10.19 69.06
KRH54520 Soybean plasma membrane, plastid 59.13 69.02
CDY62599 Canola plasma membrane 62.95 68.24
CDY02114 Canola plasma membrane 64.12 68.09
CDY24573 Canola plasma membrane 11.46 67.92
CDY23039 Canola plasma membrane 63.91 67.79
CDY23043 Canola cytosol, mitochondrion 36.52 67.19
CDY21797 Canola plasma membrane 64.12 66.81
Solyc03g113040.2.1 Tomato plastid 66.88 66.67
CDY23798 Canola nucleus, peroxisome, plasma membrane 26.86 65.89
CDX77874 Canola plasma membrane 57.86 65.74
KRH63384 Soybean plasma membrane 50.74 65.66
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 34.08 65.38
Solyc03g113060.2.1 Tomato extracellular 64.97 64.83
KRH56933 Soybean plasma membrane, plastid 64.23 63.75
KRH03450 Soybean plasma membrane, plastid 64.01 63.21
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 42.14 62.23
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 27.07 59.86
TraesCS7A01G367700.1 Wheat plasma membrane 35.77 59.33
KXG25097 Sorghum plasma membrane 59.77 58.77
TraesCS1D01G345200.1 Wheat plasma membrane 59.02 58.4
Os08t0398300-01 Rice plasma membrane 59.24 58.31
TraesCS1A01G343000.1 Wheat plasma membrane 58.92 58.24
HORVU4Hr1G087670.8 Barley mitochondrion 59.13 58.02
TraesCS1B01G356200.1 Wheat plasma membrane 58.6 57.98
HORVU1Hr1G075620.5 Barley plasma membrane 57.96 57.23
TraesCS4B01G365000.1 Wheat plasma membrane 59.02 56.5
Zm00001d050259_P002 Maize plasma membrane 58.81 56.3
TraesCS5A01G193200.1 Wheat plasma membrane 55.94 55.71
OQU89360 Sorghum plasma membrane 55.94 55.59
TraesCSU01G138200.1 Wheat plasma membrane 58.81 55.51
TraesCS5D01G195700.1 Wheat plasma membrane 55.41 55.18
TraesCS5A01G534100.3 Wheat cytosol 58.92 54.95
Zm00001d020208_P003 Maize plasma membrane 55.1 54.75
Solyc06g070950.1.1 Tomato plasma membrane 51.7 54.66
TraesCS3D01G368700.2 Wheat plasma membrane 55.84 54.34
HORVU5Hr1G056930.20 Barley plasma membrane 55.84 53.84
TraesCS7D01G355100.1 Wheat plastid 54.46 53.72
TraesCS5B01G188600.1 Wheat plasma membrane 54.14 53.68
Os06t0589300-01 Rice plasma membrane 53.82 53.42
TraesCS7B01G260800.1 Wheat plastid 54.14 53.35
EER89983 Sorghum plastid 53.4 52.73
Zm00001d036927_P001 Maize plasma membrane, plastid 53.82 52.54
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 54.35 51.66
GSMUA_Achr7P23890_001 Banana plasma membrane 62.1 50.0
CDX68439 Canola nucleus 8.17 48.73
GSMUA_Achr3P20510_001 Banana plasma membrane 59.66 47.91
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 8.49 44.69
Solyc06g070930.2.1 Tomato plastid 12.63 43.43
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 7.22 40.48
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 7.22 40.48
HORVU4Hr1G039510.1 Barley cytosol 7.01 39.29
CDY23799 Canola cytosol, peroxisome, plasma membrane 8.49 39.22
CDY64180 Canola plasma membrane 16.56 24.88
CDX96058 Canola cytosol 6.9 24.62
CDY24159 Canola golgi, mitochondrion 24.2 24.33
CDY01873 Canola cytosol 6.79 24.24
CDY02116 Canola plasma membrane 21.55 24.17
CDY62594 Canola cytosol 11.68 24.07
CDX68436 Canola plasma membrane 7.43 23.81
CDY23040 Canola plasma membrane 24.1 23.79
CDY36933 Canola golgi, mitochondrion 24.31 23.73
CDY58413 Canola cytosol, plastid 6.9 23.72
CDX69605 Canola plastid 6.9 23.72
CDY23042 Canola plasma membrane 23.57 23.69
CDY16404 Canola plastid 8.17 23.4
CDY23800 Canola plasma membrane 22.61 23.28
CDY52820 Canola cytosol, nucleus, plasma membrane 21.44 23.01
CDY57805 Canola plastid 7.96 22.8
CDY02118 Canola plasma membrane 23.57 22.31
CDX68434 Canola plasma membrane 16.77 22.25
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 8.28 21.37
CDY62596 Canola cytosol, plasma membrane, vacuole 6.79 20.85
CDX68435 Canola mitochondrion, plastid 5.41 19.54
CDY39288 Canola cytosol 3.4 16.16
CDY35403 Canola mitochondrion, plasma membrane 20.49 10.38
CDY22536 Canola mitochondrion, plasma membrane 20.38 10.36
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078GFL0UniProt:A0A078GFL0InterPro:AAA+_ATPaseInterPro:ABCA
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY24156ProteinID:CDY24156ProteinID:CDY24156.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00024762001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF12698ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EECA92SEG:seg::
Description
BnaC03g57210DBnaC03g57210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFL0]
Coordinates
chrLK032154:-:358246..362766
Molecular Weight (calculated)
105158.0 Da
IEP (calculated)
8.567
GRAVY (calculated)
0.002
Length
942 amino acids
Sequence
(BLAST)
001: MADAGPASFS TRANALLRKN LSYQTRNIWS NIRLIMIPFY LCVLLVGIQA LFDSQITNSA DNQCGCLCTL TNENGKCVNK TCGIEYSSTD QAFFCSIPSP
101: PQWPPLLQVP PPQSRAVRAS FLPEIGLPGE SCRRSGSCPV TFLFTGSNHS LGASLYGNML PSSVTVNSSD LLQGLAYNVL GTETEAELTN YLDPGIASDL
201: PIYNIQSRCI LNAAFPFSFG VGPLKFQKDL RCVQGLNLWR NDSKEVNDVI FKGYKKGNPE GKANEIAAAY DLLNTNRNNF NVHIWYNSTY EENSRNRPST
301: LVRVARSVNL VSNAYLQFLQ GSGTKMLFEY VKEMPKQETS LRLDIASLIG PLFFTWVILL LFPVILSSLV YEKQERLRII MKMHGLGDGP YWMISYAYFL
401: TISTLYFICL MIFGSAIGLK FFRLNDYSLQ FVFYFLYVNL QIALCFLVSS IFSKVKTSTV VAYIYVFGSG LLGTFLFQFL IQDSSFPRGW IIFMELYPGF
501: SLYRGLYEFA QFAFQGNLRG ADGMKWKDFS ESAMDEVFYI IIVEWFLALT AAYYIDKIVS SGKDPMFFLK KPFKKSPSMR KPSLQRQGSK VFVEMEKPDV
601: AQEIEKVEKL MLEASTSHAI VCDNLKKVYP GRDGNPPKMA VRGLSLAVPS GECFGMLGPN GAGKTSFINM MTGLLKPTSG TGLVQGLDIC NDMDRVYTSM
701: GVCPQHDLLW ETLTGREHLL FYGRLKNLKG SVLTQAVEES LRSVNLFHGG VGDKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV
801: IKRAKQNTAI ILTTHSMEEA EFLCDRLGIF VDGSLQCIGN PKELKGRYGG SYVFTMTTSS EHEGNVEKLI QDVSPNAKKI YHIAGTQKFE LPKEDVRISE
901: VFQAVEKAKT NFTVFAWGLA DTTLEDVFIK VARTSQAFNV FS
Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)
001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS
Arabidopsis Description
ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.