Factsheet for TraesCS4B01G365000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, mitochondrion, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G138200.1	Wheat	plasma membrane	93.5	92.18
HORVU4Hr1G087670.8	Barley	mitochondrion	89.02	91.25
TraesCS5A01G534100.3	Wheat	cytosol	93.09	90.69
TraesCS1B01G356200.1	Wheat	plasma membrane	83.84	86.66
Os08t0398300-01	Rice	plasma membrane	76.73	78.89
KXG25097	Sorghum	plasma membrane	75.81	77.87
Zm00001d050259_P002	Maize	plasma membrane	75.71	75.71
CDX94927	Canola	cytosol	8.43	69.75
TraesCS5B01G188600.1	Wheat	plasma membrane	66.56	68.95
KRH54520	Soybean	plasma membrane, plastid	53.86	65.68
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	63.11	65.44
VIT_12s0055g00730.t01	Wine grape	extracellular	8.33	64.57
PGSC0003DMT400083070	Potato	cytosol	8.03	63.71
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	31.5	63.14
Solyc03g113040.2.1	Tomato	plastid	60.47	62.96
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	40.24	62.07
CDY02120	Canola	cytosol, nucleus, plasma membrane	41.06	61.3
KRH63384	Soybean	plasma membrane	45.33	61.26
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.92	60.89
CDY31786	Canola	cytosol, nucleus, plasma membrane	40.65	60.61
Solyc03g113060.2.1	Tomato	extracellular	57.52	59.96
AT3G47790.1	Thale cress	plasma membrane	54.47	59.49
Bra018113.1-P	Field mustard	plasma membrane	56.71	59.24
CDX83025	Canola	plasma membrane	56.61	59.13
CDY36930	Canola	plasma membrane	56.5	59.02
CDY24156	Canola	plasma membrane	56.5	59.02
KRH56933	Soybean	plasma membrane, plastid	56.91	59.01
Bra033785.1-P	Field mustard	plasma membrane	56.4	58.92
AT3G47780.1	Thale cress	plasma membrane	55.89	58.82
CDX68441	Canola	plasma membrane	56.2	58.7
KRH03450	Soybean	plasma membrane, plastid	56.4	58.18
Bra019513.1-P	Field mustard	plasma membrane	52.13	57.45
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	51.22	56.88
CDX68440	Canola	cytosol, mitochondrion	8.03	56.83
CDY24158	Canola	plasma membrane	53.35	56.7
CDY21797	Canola	plasma membrane	52.03	56.64
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	53.86	56.56
VIT_07s0095g00600.t01	Wine grape	extracellular	3.96	56.52
Bra018115.1-P	Field mustard	plasma membrane	52.95	56.26
CDX77421	Canola	plasma membrane	53.25	56.04
AT3G47760.3	Thale cress	plasma membrane	53.05	55.77
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	52.44	55.72
CDY23043	Canola	cytosol, mitochondrion	28.96	55.66
TraesCS1B01G356300.1	Wheat	mitochondrion	53.25	55.51
CDY39546	Canola	plasma membrane	52.74	55.51
AT5G61700.1	Thale cress	plasma membrane	51.73	55.51
CDX77874	Canola	plasma membrane	46.75	55.49
Bra015049.1-P	Field mustard	plasma membrane	50.3	55.43
AT3G47740.1	Thale cress	plasma membrane	52.13	55.04
CDY62599	Canola	plasma membrane	48.58	55.01
Solyc06g070950.1.1	Tomato	plasma membrane	49.8	54.99
AT5G61740.1	Thale cress	plasma membrane	50.71	54.9
CDY02114	Canola	plasma membrane	49.29	54.68
PGSC0003DMT400083071	Potato	plasma membrane	51.93	54.65
TraesCS7B01G260800.1	Wheat	plastid	53.05	54.6
CDY36931	Canola	plastid	51.42	54.35
GSMUA_Achr7P23890_001	Banana	plasma membrane	64.43	54.19
CDY23039	Canola	plasma membrane	48.88	54.17
CDY24157	Canola	plastid	51.93	53.73
CDY23798	Canola	nucleus, peroxisome, plasma membrane	20.83	53.39
TraesCS6B01G211300.1	Wheat	cytosol, peroxisome, plasma membrane	42.89	53.15
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.61	52.53
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	15.45	51.01
GSMUA_Achr3P20510_001	Banana	plasma membrane	60.16	50.47
Bra012927.1-P	Field mustard	cytosol	31.5	50.41
VIT_18s0041g02240.t01	Wine grape	plasma membrane	35.26	47.15
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.12	46.48
CDX68439	Canola	nucleus	6.61	41.14
Solyc06g070930.2.1	Tomato	plastid	11.28	40.51
TraesCS3B01G432400.1	Wheat	plastid	6.81	24.45
TraesCS1B01G356100.2	Wheat	plasma membrane	23.17	23.65
TraesCS4B01G315100.1	Wheat	cytosol	6.1	22.81
TraesCS7B01G327900.1	Wheat	cytosol, golgi, mitochondrion	5.89	22.31
TraesCS4B01G336400.1	Wheat	cytosol, plastid	6.0	20.77
TraesCS5B01G369900.1	Wheat	plastid	6.61	18.21

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF12698	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G365000	EnsemblPlants:TraesCS4B01G365000.1	TIGR:cd03263	SEG:seg

Description

No Description!

Coordinates

chr4B:+:653143487..653148470

Molecular Weight (calculated)

109218.0 Da

IEP (calculated)

8.717

GRAVY (calculated)

0.109

Length

984 amino acids

Sequence
(BLAST)

001: MDGSRGPAGF ATQANALLRK NLCFQKRNVK TNVCITVFPI LLCVLLVVMQ GIINREIGKP EYRCGCACVD TAADGSCRRT ECGVQYSTQD QVATCPVPSP
101: PRWPAVLQLP PPESRAVRTA SQPLHGLPGP ACRHTRSCPA AFLVTGGNRS LAQSLSGQLF PALSSPLNFS DYLHMLSKIV SGSEAPASFR QFLEPSFTPG
201: NTLYIVQPRC RPNFLQTVSV NAGTKPLKLN VDCIQGLSLW RESASVINDE LFKGYRQQRE SGGGKANEFA AGYDFLSTNT DSLDITIWFN STYNNNTGVF
301: EMALLRVPRL VNMVSNAYIK FLRGSGAEML LEYVKDMPKV GSELKLDLSS LLGALFFTWI IELLFPVILT YLVYEKQQKL KIMMKMHGLK SGPYWMITYT
401: YFFALSALYM ILFVTFGSLI GLGFFTTNDY GIQIVFYFIY INLQIALAFF AASFFSSVKI ATVVGYIYVF GSGLLGAFLL RFFIQDNSFP KGWIVVMEII
501: PGFSLYRGLY ELGQYAFTGT AMGTDGMTWT SLSDPVNGMR TVLIIMAVEW AILLPLAFYL DQVSLLGGGL RKRFLILLKC FKKRAASFRM YSFGRIGSKV
601: IVEMENPDAT QEREAVEQLL LEPNANYAII CDNLKKVYHG RDGNPDKLAV RGLSLALPKG QCFGMLGPNG AGKTSFISMM IGLVPPMSGT AYVHGMDIRT
701: DMNEIYTNMG VCPQHDLLWE TLTGKEHLLF YGRLKNLKGA ELLKATDDSL KSVNLFRGGV GDKQVGKYSG GMKRRLSVAI SLIGDPKVVF MDEPSTGLDP
801: ASRNSLWRVV KEAKKNRAII LTTHSMEEAE VLCDRLSIFV DGGFQCIGNP KEVNYLFTCM AHISTFFVQS YLIEHLPIFS LQCSQLKARY GGTYVLTVTT
901: SPEHEQEVEQ LVHRLSPNAN RIYHISGTQK FELPKQEVKI ASVFHEVETA KCRFSIHAWG LTDTTLEDVF IKVAQGAQAF GVNV

Best Arabidopsis Sequence Match ( AT3G47740.1 )
(BLAST)

001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS

Arabidopsis Description

ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.