Factsheet for TraesCS4B01G315100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G414400.1	Wheat	cytosol	94.68	94.68
TraesCS7B01G327900.1	Wheat	cytosol, golgi, mitochondrion	82.51	83.46
HORVU4Hr1G079940.5	Barley	cytosol	91.64	77.24
TraesCS4B01G336400.1	Wheat	cytosol, plastid	80.23	74.3
Solyc06g068600.2.1	Tomato	cytosol	49.05	69.73
CDY01873	Canola	cytosol	66.16	65.91
Bra004271.1-P	Field mustard	cytosol	65.4	65.15
CDX96058	Canola	cytosol	65.4	65.15
AT1G67940.1	Thale cress	cytosol	64.64	64.64
VIT_11s0052g00540.t01	Wine grape	cytosol	64.26	63.06
Os06t0695800-01	Rice	unclear	80.99	61.56
KRH41857	Soybean	plasma membrane	60.46	61.15
Solyc03g117810.2.1	Tomato	cytosol	60.84	60.84
PGSC0003DMT400036875	Potato	cytosol	60.46	60.46
PGSC0003DMT400074438	Potato	extracellular	63.12	59.29
GSMUA_Achr7P19550_001	Banana	endoplasmic reticulum, extracellular, vacuole	69.58	59.03
Os10t0434900-00	Rice	cytosol, mitochondrion	29.66	58.21
TraesCS3B01G432400.1	Wheat	plastid	28.14	27.01
TraesCS5B01G369900.1	Wheat	plastid	27.0	19.89
TraesCS6B01G211300.1	Wheat	cytosol, peroxisome, plasma membrane	23.95	7.93
TraesCS1B01G356300.1	Wheat	mitochondrion	24.33	6.78
TraesCS5B01G188600.1	Wheat	plasma membrane	23.57	6.53
TraesCS1B01G356200.1	Wheat	plasma membrane	23.57	6.51
TraesCS4B01G365000.1	Wheat	plasma membrane	22.81	6.1
TraesCS7B01G260800.1	Wheat	plastid	21.29	5.86
TraesCS1B01G356100.2	Wheat	plasma membrane	21.29	5.81

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005315	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887
GO:GO:0035435	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR43423	PANTHER:PTHR43423:SF1	InterPro:Phosp_transpt1	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4B01G315100
EnsemblPlants:TraesCS4B01G315100.1	TIGR:cd03260	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:-:604532284..604533360

Molecular Weight (calculated)

27963.0 Da

IEP (calculated)

6.137

GRAVY (calculated)

0.021

Length

263 amino acids

Sequence
(BLAST)

001: MGSSPAPDDA IRQHLLDVDG LAADGPKIRV RGLTLRPPGP NGEQTVPGSD LDVPRGVVMG VIGPSGSGKS TLLRALNRLW EPAPGAVTLD GADICGLDVL
101: ALRRRVGMLF QLPAMFHGTV ADNVRYGPRL RGETLTDAQV KELLGLSDLD PALASRPASE LSVGQAQRVA LARTLANEPE VLLLDEPTSA LDPISTQNIE
201: EAIVRLKKTR GMTAVIVSHS VRQIQRIADL VCLVVDGVVV EVLPPSDLSQ AKHPMARRFL ELS

Best Arabidopsis Sequence Match ( AT1G67940.1 )
(BLAST)

001: MPSLWSNESD GSLREHLVDV VVSGSEPKIR VHDLTRVADD GSRILKGVTI DIPKGMIVGV IGPSGSGKST FLRSLNRLWE PPESTVFLDG EDITNVDVIA
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS

Arabidopsis Description

ABCI17Sensitive to aluminum rhizotoxicity 1 [Source:UniProtKB/TrEMBL;Acc:D6RVY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.