Factsheet for TraesCS7B01G260800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G355100.1	Wheat	plastid	97.59	97.7
TraesCS7A01G367700.1	Wheat	plasma membrane	57.85	97.36
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	95.61	92.23
Os06t0589300-01	Rice	plasma membrane	83.05	83.67
EER89983	Sorghum	plastid	81.59	81.76
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	14.23	80.95
Zm00001d036927_P001	Maize	plasma membrane, plastid	81.07	80.31
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	14.02	79.76
HORVU4Hr1G039510.1	Barley	cytosol	13.39	76.19
CDX94927	Canola	cytosol	8.16	65.55
PGSC0003DMT400083070	Potato	cytosol	7.74	59.68
KRH54520	Soybean	plasma membrane, plastid	49.9	59.11
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	57.95	58.38
Solyc03g113040.2.1	Tomato	plastid	57.32	57.99
KRH63384	Soybean	plasma membrane	43.93	57.69
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.66	57.23
CDY02120	Canola	cytosol, nucleus, plasma membrane	39.44	57.21
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	37.87	56.74
Solyc03g113060.2.1	Tomato	extracellular	55.96	56.67
CDY31786	Canola	cytosol, nucleus, plasma membrane	39.02	56.52
AT3G47790.1	Thale cress	plasma membrane	53.03	56.27
Bra019513.1-P	Field mustard	plasma membrane	51.46	55.1
KRH56933	Soybean	plasma membrane, plastid	54.5	54.9
TraesCS1B01G356200.1	Wheat	plasma membrane	54.39	54.62
AT3G47760.3	Thale cress	plasma membrane	53.45	54.59
CDY21797	Canola	plasma membrane	51.46	54.42
CDY39546	Canola	plasma membrane	53.14	54.33
CDX77421	Canola	plasma membrane	53.14	54.33
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	50.31	54.29
Bra018113.1-P	Field mustard	plasma membrane	53.35	54.14
CDY24156	Canola	plasma membrane	53.35	54.14
CDY36930	Canola	plasma membrane	53.24	54.03
KRH03450	Soybean	plasma membrane, plastid	53.87	53.98
CDX68440	Canola	cytosol, mitochondrion	7.85	53.96
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	52.82	53.9
CDX77874	Canola	plasma membrane	46.65	53.8
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	52.09	53.78
AT3G47740.1	Thale cress	plasma membrane	52.3	53.65
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	27.51	53.56
VIT_12s0055g00730.t01	Wine grape	extracellular	7.11	53.54
Bra015049.1-P	Field mustard	plasma membrane	50.0	53.53
AT3G47780.1	Thale cress	plasma membrane	52.3	53.48
TraesCS5B01G188600.1	Wheat	plasma membrane	53.03	53.37
CDX83025	Canola	plasma membrane	52.51	53.29
Bra018115.1-P	Field mustard	plasma membrane	51.57	53.24
Bra033785.1-P	Field mustard	plasma membrane	52.41	53.18
TraesCS4B01G365000.1	Wheat	plasma membrane	54.6	53.05
CDY24158	Canola	plasma membrane	51.36	53.02
CDX68441	Canola	plasma membrane	52.2	52.97
AT5G61740.1	Thale cress	plasma membrane	49.79	52.37
CDY02114	Canola	plasma membrane	47.8	51.52
AT5G61700.1	Thale cress	plasma membrane	49.37	51.47
CDY36931	Canola	plastid	50.0	51.34
CDY62599	Canola	plasma membrane	46.65	51.32
CDY24157	Canola	plastid	51.05	51.31
CDY23043	Canola	cytosol, mitochondrion	27.41	51.17
CDY23039	Canola	plasma membrane	47.38	51.01
PGSC0003DMT400083071	Potato	plasma membrane	49.69	50.8
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.28	50.51
Solyc06g070950.1.1	Tomato	plasma membrane	46.65	50.06
TraesCS6B01G211300.1	Wheat	cytosol, peroxisome, plasma membrane	40.38	48.61
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	14.96	47.99
Bra012927.1-P	Field mustard	cytosol	30.75	47.8
TraesCS1B01G356300.1	Wheat	mitochondrion	46.65	47.25
CDY23798	Canola	nucleus, peroxisome, plasma membrane	18.72	46.61
VIT_18s0041g02240.t01	Wine grape	plasma membrane	35.56	46.2
CDX68439	Canola	nucleus	7.01	42.41
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	18.72	42.02
Solyc06g070930.2.1	Tomato	plastid	10.56	36.86
VIT_07s0095g00600.t01	Wine grape	extracellular	2.3	31.88
TraesCS1B01G356100.2	Wheat	plasma membrane	22.49	22.3
TraesCS3B01G432400.1	Wheat	plastid	6.38	22.26
TraesCS4B01G315100.1	Wheat	cytosol	5.86	21.29
TraesCS7B01G327900.1	Wheat	cytosol, golgi, mitochondrion	5.54	20.38
TraesCS4B01G336400.1	Wheat	cytosol, plastid	5.75	19.37
TraesCS5B01G369900.1	Wheat	plastid	6.9	18.49

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF12698	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7B01G260800	EnsemblPlants:TraesCS7B01G260800.1	TIGR:cd03263	SEG:seg

Description

No Description!

Coordinates

chr7B:+:481297694..481306585

Molecular Weight (calculated)

106224.0 Da

IEP (calculated)

8.279

GRAVY (calculated)

0.031

Length

956 amino acids

Sequence
(BLAST)

001: MEPLSGAAAA AAAAAGGGGA SRPPSFASQT NALLRKNLIF QKRNRKATIR LIIVPIYLCV LLSVLQRVIN NLLDKPKYKC GCMCVDVNGT GPCQNVCGIQ
101: YSTLDQAGSC PIPNPPEWPA LLQVPHLEYR ATQDSSESCR KSQSCPAAIP FTGANETLST TVMQNMFTDS PLSNLSDNAS ISGILLGTDM PGTSTGFIEP
201: AFISDVPIYV LQSECKSRNS VTLRTTIDAI NVQKEIKCVQ GLPLWRNSSR TINEETFKGY RKEKIGKGIS EVAMAYDFQD SNEKRFNVLA LYNSTYQNIS
301: YVPMPFGLLR VSRSLNAVSN AYLQFLQGQG SGIKMLLEFT KEMPKQATRL TIDFSSLIGP LFFEWVVALL FPVMLTYLVY EKQHKLRTMM KMHGLGNGPY
401: WIIYYAYFLI LSTVYLVLFV IFGALIGLNF FKTNDYGIQF VFFFSFINLQ IVLSFLAATF FSKVNTAQAI AYLYIFGSGL MAGSLIRNFL EGGKFPRHWI
501: TVLEIIPAFS LYRGLCGLSQ YAIRASETGN PGMRWSDLND HTNGMRDVMI IIIVEWLVLL PVAYYFDYAA SVGNSSGLLS IIKCLLRKNT TWRRIAVNEV
601: ADNDVHVEME KLDIIKERET VDQVLQQRNS GYAVVCDDLK KVYHGKDGNP DKYAVRGLSL ALPYGECLGI LGPNGAGKSS FISMMIGFSK PTSGNAFVQD
701: FSIHTDMENI YNSMGVCPQI DMLWEMLTGR EHLQFYGRLK SLTGSALDLA VEESLRSVNL LLGGAADKQV RKYSGGMKRR LSVAISLIGD AKVVYMDEPS
801: TGLDPASRKS LWTAVKQAKQ DRAIILTTHS MEEAEVLCDR LCIMVDGRLQ CIGRPKELIA RYGGYYVLTM TTSSEFEREV EDLVLKLSPD ARKVYHLSGT
901: QKYELSKQQV RIADVFMAVE NLKRRVEVQA WGLADTTMED VFVKVATGAQ SSDELS

Best Arabidopsis Sequence Match ( AT3G47740.1 )
(BLAST)

001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS

Arabidopsis Description

ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.