Factsheet for Bra012931.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012927.1-P	Field mustard	cytosol	53.21	51.22
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.86	48.81
CDY23798	Canola	nucleus, peroxisome, plasma membrane	30.91	47.66
Bra018113.1-P	Field mustard	plasma membrane	67.91	42.68
Bra033785.1-P	Field mustard	plasma membrane	67.23	42.25
KRH54520	Soybean	plasma membrane, plastid	57.09	41.88
Bra018115.1-P	Field mustard	plasma membrane	64.7	41.36
KRH63384	Soybean	plasma membrane	50.84	41.35
Bra015049.1-P	Field mustard	plasma membrane	61.82	40.99
Solyc03g113040.2.1	Tomato	plastid	62.33	39.05
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	19.59	38.93
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	41.72	38.71
Solyc03g113060.2.1	Tomato	extracellular	60.64	38.03
Bra019513.1-P	Field mustard	plasma membrane	55.24	36.62
KRH56933	Soybean	plasma membrane, plastid	57.77	36.04
KRH03450	Soybean	plasma membrane, plastid	57.26	35.53
TraesCS7A01G367700.1	Wheat	plasma membrane	33.28	34.68
TraesCS1B01G356200.1	Wheat	plasma membrane	54.56	33.93
TraesCS1D01G345200.1	Wheat	plasma membrane	54.39	33.82
TraesCS1A01G343000.1	Wheat	plasma membrane	54.05	33.58
Solyc06g070950.1.1	Tomato	plasma membrane	50.34	33.45
HORVU1Hr1G075620.5	Barley	plasma membrane	53.89	33.44
HORVU4Hr1G087670.8	Barley	mitochondrion	54.22	33.44
KXG25097	Sorghum	plasma membrane	54.05	33.4
Os08t0398300-01	Rice	plasma membrane	53.72	33.23
Zm00001d050259_P002	Maize	plasma membrane	54.73	32.93
Zm00001d020208_P003	Maize	plasma membrane	52.53	32.81
OQU89360	Sorghum	plasma membrane	52.53	32.81
TraesCS5B01G188600.1	Wheat	plasma membrane	51.52	32.11
TraesCS5D01G195700.1	Wheat	plasma membrane	51.18	32.03
TraesCS5A01G193200.1	Wheat	plasma membrane	50.84	31.82
TraesCS4B01G365000.1	Wheat	plasma membrane	52.53	31.61
Os06t0589300-01	Rice	plasma membrane	50.34	31.4
TraesCS7B01G260800.1	Wheat	plastid	50.51	31.28
TraesCS7D01G355100.1	Wheat	plastid	50.34	31.2
TraesCSU01G138200.1	Wheat	plasma membrane	52.53	31.16
HORVU5Hr1G056930.20	Barley	plasma membrane	51.18	31.01
EER89983	Sorghum	plastid	49.66	30.82
TraesCS5A01G534100.3	Wheat	cytosol	52.36	30.69
Zm00001d036927_P001	Maize	plasma membrane, plastid	49.83	30.57
TraesCS3D01G368700.2	Wheat	plasma membrane	49.83	30.48
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	50.0	29.87
GSMUA_Achr7P23890_001	Banana	plasma membrane	58.11	29.4
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	23.48	28.31
GSMUA_Achr3P20510_001	Banana	plasma membrane	55.41	27.96
Solyc06g070930.2.1	Tomato	plastid	8.11	17.52
Bra012930.1-P	Field mustard	plasma membrane	24.32	15.86
Bra012928.1-P	Field mustard	plasma membrane	24.32	15.53
Bra018116.1-P	Field mustard	golgi, mitochondrion	25.84	15.52
Bra022481.1-P	Field mustard	plastid	8.28	14.89
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	4.22	14.88
Bra004271.1-P	Field mustard	cytosol	6.59	14.77
Bra008779.1-P	Field mustard	plastid	6.42	13.87
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	3.89	13.69
HORVU4Hr1G039510.1	Barley	cytosol	3.89	13.69
Bra038152.1-P	Field mustard	plasma membrane, vacuole	9.46	13.66
VIT_07s0095g00600.t01	Wine grape	extracellular	1.18	10.14
Bra000236.1-P	Field mustard	mitochondrion	20.61	6.62

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	InterPro:ATPase_AAA_core
EnsemblPlantsGene:Bra012931	EnsemblPlants:Bra012931.1	EnsemblPlants:Bra012931.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	UniProt:M4D8X1	InterPro:P-loop_NTPase	PFAM:PF13304	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19229	PANTHER:PTHR19229:SF127	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00025405E2	SEG:seg

Description

AT5G61700 (E=1e-108) ATATH16, ATH16 | ATATH16; ATPase, coupled to transmembrane movement of substances / transporter

Coordinates

chrA03:-:21457962..21461837

Molecular Weight (calculated)

65541.3 Da

IEP (calculated)

7.976

GRAVY (calculated)

-0.066

Length

592 amino acids

Sequence
(BLAST)

001: MKGVSDMTGD CKSNADLSGG MCPIPNPPML PPMLQIPQHE LRSVKTDFLP YKDLPDKSCR GTMGGSCPVT ILMTGEKQPL GKAISANIFA TSFAVNSSDL
101: LPTLANNILG SPIAAAKDNY ADPGLAPGLP IYNIQPLCTA NSTWPLSLEK IQTAYDLMNT DKKNFNVTIW YNSTYKDEFS TGPVKLVRVP RSINQISNAY
201: LKFLKGPGLR ILFEFVKEVP KHATRFNTDI ASLLGPLFFT WVVLLLFPVI LTSLVYEKQE RLRIIMKMHG LGDEEWIVAL ELYPGFSLYR GLYEFSQYAS
301: RGNGMKWQDL SDSGMGEVLC IMSIEWFLAL IIAFYIDQVF SSGKHPFFFL NLFKKSSSIP SKPTMQRVDS KKVSIDMGKI DVSQEAVEES LKSVSLFDGG
401: VGDKPAGNYS GGMKRRLSVA ISLIGNPKVV YLDEPSTGLD PASRKNLWDV IQRAKQNTAI ILTTHSMEEA EFLCDRLGIF VDGALQCIGN SKELKSRYGG
501: SYVFTMTTSS EHEEDVERLV STVSPNAKKV YHLAGTQKFE LPKQEVRIAE VFRAVEKAKS NFTVFAWGLA DTTLEDVFIK VAKSAQAFIS LS

Best Arabidopsis Sequence Match ( AT5G61700.1 )
(BLAST)

001: MVNPSPASFW TQANALLRKN LTYQRKHIWT NVRLILVPLF LCLILLAIQQ VLDALMKGVS DMSNCGGNVT LPGGICPIPN PPSLPPMLQI PQHELRSVKT
101: DFFSYKDLPD KLCRETGSCP VTILFTGDKL PLGKALSANI FSTSFVVNSS DLLPTLANNV LGSTEAAGED NYEDPGIASD LPIYSIQPSC SANSTWPLSL
201: GQIQTAVKCV QGLCLWRNNS VEVNDELFKG SWRGNPAGMP NEIVAAYDLM STDRKNFNVT IWYNSTYNDE FATGQALKLV RVPRSINLIS NAYLKFLKGP
301: GTRILFEFLK EVPKEETKMN QDIASLLGPL FFTWVVLLLF PVILTSLVYE KQERLRIIMK MHGLGDGPYW MISYAYFLTI SMLYVISLVG FGSAIGLKYF
401: RRNDYSIQFV FYFIYSNLQI SLAFLVSSIF SKVKTVTVIA YILVYGTGLL GSFLFQKMIE TQSFPEEWIL AMELYPGFSL YRGLYEFSQY ASRGNGMKWQ
501: DLSDSGMGEV FCIMSVEWFL ALIVAYYIDQ VFTSGKHPFF FLVNLFKSPS SLPRRPTVQR LDSKRVFIDM DKHDVTQERE SVQKLRNEGS TGHAILCDNL
601: KKVYPGRDGN PPKMAVRGLY LSVSSGECFG MLGPNGAGKT SFISMMTGLL KPSSGTALVQ GLDICKDMNK VYTSMGVCPQ HDLLWETLTG REHLLFYGRL
701: KNIKGSDLTQ AVEESLKSVS LYDGGVGDKP AGNYSGGMKR RLSVAISLIG NPKVVYLDEP STGLDPASRK NLWNVIKRAK QNTAIILTTH SMEEAEFLCD
801: RLGIFVDGGL QCIGNSKELK SRYGGSYVFT MTTSSKHEEE VERLVESVSP NAKKIYHLAG TQKFELPKQE VRIAEVFRAV EKAKANFTVF AWGLADTTLE
901: DVFIKVARTA QAFISLS

Arabidopsis Description

ABCA12ABC transporter A family member 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLT8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.