Factsheet for Bra018116.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 1
mitochondrion 3
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36933	Canola	golgi, mitochondrion	97.36	99.48
CDY24159	Canola	golgi, mitochondrion	93.61	98.51
AT3G47730.1	Thale cress	mitochondrion, plasma membrane	89.55	89.83
Bra012928.1-P	Field mustard	plasma membrane	70.39	74.87
VIT_17s0000g05850.t01	Wine grape	plasma membrane	70.08	72.13
PGSC0003DMT400046727	Potato	plasma membrane	66.23	69.91
Bra012930.1-P	Field mustard	plasma membrane	63.89	69.38
KRH54517	Soybean	plasma membrane	67.14	68.46
GSMUA_Achr3P20540_001	Banana	cytosol, extracellular, nucleus	11.56	67.06
TraesCS1B01G356100.2	Wheat	plasma membrane	65.11	66.6
EES14950	Sorghum	mitochondrion, plasma membrane, plastid	64.91	66.6
KRH63387	Soybean	plasma membrane, plastid	64.91	66.53
GSMUA_Achr7P23880_001	Banana	plasma membrane	64.5	66.39
TraesCS1A01G342900.2	Wheat	plasma membrane	65.01	66.36
TraesCS1D01G345100.2	Wheat	mitochondrion, plasma membrane, plastid	64.81	66.22
Os08t0398000-01	Rice	plasma membrane	64.2	65.39
Zm00001d032279_P005	Maize	golgi, plastid	64.3	65.36
Bra038152.1-P	Field mustard	plasma membrane, vacuole	27.08	65.12
HORVU1Hr1G075640.9	Barley	golgi	63.89	64.35
GSMUA_Achr3P20560_001	Banana	plastid	17.85	61.32
Solyc06g070960.1.1	Tomato	plasma membrane	55.17	58.75
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	18.46	28.93
Bra019513.1-P	Field mustard	plasma membrane	23.83	26.32
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	15.52	25.84
Bra018113.1-P	Field mustard	plasma membrane	23.83	24.95
Bra018115.1-P	Field mustard	plasma membrane	23.33	24.84
Bra033785.1-P	Field mustard	plasma membrane	23.12	24.2
Bra012927.1-P	Field mustard	cytosol	15.01	24.07
Bra008779.1-P	Field mustard	plastid	6.49	23.36
Bra015049.1-P	Field mustard	plasma membrane	20.99	23.18
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	6.9	22.82
Bra022481.1-P	Field mustard	plastid	7.2	21.58
Bra004271.1-P	Field mustard	cytosol	5.68	21.21
Bra000236.1-P	Field mustard	mitochondrion	25.86	13.84

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	MapMan:5.8.5	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra018116	EnsemblPlants:Bra018116.1	EnsemblPlants:Bra018116.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	InterPro:IPR003439	UniProt:M4DNM9	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF193	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI000253F3E9	SEG:seg	:	:	:

Description

AT3G47730 (E=0.0) ATATH1, ATH1 | ATATH1; ATPase, coupled to transmembrane movement of substances / transporter

Coordinates

chrA06:+:10341180..10345625

Molecular Weight (calculated)

108659.0 Da

IEP (calculated)

7.071

GRAVY (calculated)

0.045

Length

986 amino acids

Sequence
(BLAST)

001: MTLQRGLALL CQQYTALFRK NLILSWRSKR ATFLQLFASF FFILLIFCIQ EAMEKSFASS TALKTVTDPS ALVSPPIPPC EDKFFVNLPC YDFVWSGNDS
101: PRARDIVNAI RANNPGRPIP EDKVLPFKTP LEVDAWLMAN PLQTPGALHF MDRNATVMSY GIQTNSTPEM NRGRFEDPTF KFQIPLQVAA EREIARSLIG
201: DPKFNWVVGF KEFPHPTIEA VVALDTIGPT FFLAIAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TTVSALLVVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQLNMI GVAFMLSAFI SKSSSATTVG FFVFLVGFVT QLGASSGFPY AKKYSQTIRT LWSLFPPNTF SQGLKMLSDA TSTPQDPGIS
401: WSKRAVCGPN DDTDCVITIN DIYLWLLGTF FLWFVLALYF DNIVPNASGV RKSVFYFLKP GYWTGRGGNR VEEGGICSCA GSAPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNIAVQI RGLAKTYPGT TKFGCCKCKK TPAYHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGI NPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLRLF ASIKGLPPAS INPMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFTESNNQ ENNGNGEAGA ADSREPVKKF FKDHLNVKPV
801: EETKAFMTFV IPHDKENLLT RFFAELQDRE TEFGISDIQL GLATLEEVFL NIARKAELES AAVDGTMVTL ELTSGPSVEI PVGARFVGIP GTENAENPRG
901: VMVEVYWQQD ESGSLCISGH STEMPVPDNV PATDPVAPGH GGVSLLGRRG RRQQVQGIVI DPEFVGSAAS RRVSRSGSFA SQRSSL

Best Arabidopsis Sequence Match ( AT3G47730.1 )
(BLAST)

001: MTLQRGLPLL LQQYTALFKK NLLLSWRSKR ATFLQLFASF FFILLIFCIQ AAMEKSFASS TALKTVTDPT ALISPPIPPC EDKFFVNLPC YDFVWSGNRS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS

Arabidopsis Description

ABCA2ATH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6R6]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.