Factsheet for Bra018115.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	95.25	99.55
CDY24158	Canola	plasma membrane	96.44	96.44
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	79.48	78.55
AT3G47760.3	Thale cress	plasma membrane	79.05	78.21
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.02	78.06
Bra015049.1-P	Field mustard	plasma membrane	72.25	74.92
Bra018113.1-P	Field mustard	plasma membrane	76.13	74.84
Bra033785.1-P	Field mustard	plasma membrane	74.3	73.04
KRH54520	Soybean	plasma membrane, plastid	58.75	67.41
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	20.84	64.77
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.36	64.7
Bra019513.1-P	Field mustard	plasma membrane	61.66	63.94
KRH63384	Soybean	plasma membrane	49.35	62.77
Solyc03g113040.2.1	Tomato	plastid	64.04	62.75
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	42.98	62.38
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	32.72	61.71
Solyc03g113060.2.1	Tomato	extracellular	61.88	60.7
Bra012927.1-P	Field mustard	cytosol	39.85	60.0
TraesCS7A01G367700.1	Wheat	plasma membrane	36.61	59.68
KRH56933	Soybean	plasma membrane, plastid	60.37	58.9
KRH03450	Soybean	plasma membrane, plastid	60.37	58.6
TraesCS1A01G343000.1	Wheat	plasma membrane	57.24	55.61
TraesCS1D01G345200.1	Wheat	plasma membrane	57.02	55.46
TraesCS1B01G356200.1	Wheat	plasma membrane	56.91	55.36
KXG25097	Sorghum	plasma membrane	57.13	55.22
Os08t0398300-01	Rice	plasma membrane	56.59	54.75
HORVU4Hr1G087670.8	Barley	mitochondrion	56.16	54.17
HORVU1Hr1G075620.5	Barley	plasma membrane	55.4	53.77
VIT_07s0095g00600.t01	Wine grape	extracellular	4.0	53.62
Zm00001d020208_P003	Maize	plasma membrane	54.32	53.06
OQU89360	Sorghum	plasma membrane	54.32	53.06
Zm00001d050259_P002	Maize	plasma membrane	56.37	53.05
TraesCS4B01G365000.1	Wheat	plasma membrane	56.26	52.95
TraesCS5D01G195700.1	Wheat	plasma membrane	53.89	52.75
TraesCS5A01G193200.1	Wheat	plasma membrane	53.67	52.54
Solyc06g070950.1.1	Tomato	plasma membrane	50.54	52.53
TraesCSU01G138200.1	Wheat	plasma membrane	55.94	51.9
TraesCS7D01G355100.1	Wheat	plastid	53.46	51.83
Os06t0589300-01	Rice	plasma membrane	52.92	51.63
TraesCS5A01G534100.3	Wheat	cytosol	56.26	51.58
TraesCS7B01G260800.1	Wheat	plastid	53.24	51.57
EER89983	Sorghum	plastid	52.92	51.36
TraesCS3D01G368700.2	Wheat	plasma membrane	53.67	51.34
Zm00001d036927_P001	Maize	plasma membrane, plastid	53.35	51.19
HORVU5Hr1G056930.20	Barley	plasma membrane	54.0	51.18
TraesCS5B01G188600.1	Wheat	plasma membrane	52.48	51.16
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	53.46	49.95
GSMUA_Achr7P23890_001	Banana	plasma membrane	58.86	46.58
GSMUA_Achr3P20510_001	Banana	plasma membrane	57.34	45.27
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	7.45	41.07
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	7.34	40.48
HORVU4Hr1G039510.1	Barley	cytosol	7.13	39.29
Solyc06g070930.2.1	Tomato	plastid	10.58	35.77
Bra004271.1-P	Field mustard	cytosol	7.13	25.0
Bra022481.1-P	Field mustard	plastid	8.53	24.01
Bra008779.1-P	Field mustard	plastid	7.02	23.72
Bra012928.1-P	Field mustard	plasma membrane	23.43	23.41
Bra018116.1-P	Field mustard	golgi, mitochondrion	24.84	23.33
Bra012930.1-P	Field mustard	plasma membrane	19.87	20.26
Bra038152.1-P	Field mustard	plasma membrane, vacuole	7.78	17.56
Bra000236.1-P	Field mustard	mitochondrion	20.3	10.21

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra018115	EnsemblPlants:Bra018115.1	EnsemblPlants:Bra018115.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	UniProt:M4DNM8	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI000253F3E8	SEG:seg	:	:	:	:

Description

AT3G47780 (E=0.0) ATATH6, ATH6 | ATATH6; ATPase, coupled to transmembrane movement of substances / transporter

Coordinates

chrA06:-:10324441..10328573

Molecular Weight (calculated)

104301.0 Da

IEP (calculated)

9.143

GRAVY (calculated)

-0.027

Length

926 amino acids

Sequence
(BLAST)

001: MADLVPASFL TQANALSRKN LAYQRRNLWS NVRLIVIPLY LCVLLVSIQA LFDTQVNNSP DNRCGCQCID DKNRDGICDK NSCGLEYSSQ KQALFCAFPS
101: PPPLPPFLQI PRPKNPSDSC RRLNGSCPVT ILVTGNNLSL GAALSRNLLT TSFIANSSVF WLRNPAINVL GTTSEPDFTN YFDPGIHSNL PIFNIQTQCT
201: PRTTFSFSFG QSPQKFQKEV RCVQGLSLWR NNSIDVTHDI LKRYQKGNHE EVINEVAAAY DLLDTDRNKF NVTIWYNSTS KTKLLERRVK LVRVPRSVNL
301: ISNAYLQYLK GPGTKILFEF VKEMPKVETW LHVDVASSIG PIFFTWVILL LFPVVLNTLV YEKQQRLRII MKMHGLGDGP YWMISYAYFL SISTLYVICL
401: LIFGSVIGLK FFRLNNYSIQ FLFYFIYINL QISIAFLVSS AFSKVKTSSV AAYIYVFGSG LLGAFLFQFL MEDPSFPRRW IFFMEVYPGF SLYRGLYEFS
501: EYALNKKDGM KWDDFSNSGM DEVFYIIIIE WFVSLIAAYY IDKISSSGKD PLFFLKNPFK FLPRPSLQKQ GSAVSVEMEK LDVAQEREKV DQLMMLEPTT
601: RYAIVCDNLK KMYPGRDGNQ PKIAVHGLSL AVPSGECFGM LGPNGAGKTS FINMMTGLVK PTSGTAFVRG LDICKDMDRA YTSMGVCPQH DLLWETLTGR
701: EHLLFYGRLK NLKGSDLNQA VEESLKSVNL SRGGVGDKPA GKYSGGMKRR LSVAISLIGC PKVVYMDEPS TGLDPASRMN LWTVIKRAKT NTAIILTTHS
801: MEEAEFLCDR LGIFVDGRLQ CIGNPKELKG RYGGSYVFTM TTSSEHEKDV EMLVKDVSPN AKKIYHIGGT QKFEIPKGEV RISEVFQAVE KAKSSFKVFA
901: WGLADTTLED VFIKVARTAQ AFNVLS

Best Arabidopsis Sequence Match ( AT3G47750.1 )
(BLAST)

001: MANHVPASFL TRANALFRKN LTYQKRNIWS NVRLIVIPFY LCVLLVGIQV LFDTQVNNSA DNRCGCRCIH KNGDGKCERK SCGLQYSSLT QASFCAFPNP
101: PPLLPLLQIP RPETRLVDPA RSSCRRTGSC PVTILVTGNN HTLGETLSRN LLSTSFAVNS SDHFLRNLAY NVLGTISEAD YTNYLDPGIH SDLPIFQIRP
201: YCTPTTNLSF SFRQPPITFH KEVRCVQGLN LWRNNSVEVN DEIFKGYRQG NHEEIINEVA AAYDLLDTDR NKFNVTIWYN SSYKGNFKVQ DRRVKYVRVP
301: RSVNMVSNAY LRFLRGPGTK MLFDFVKEMP KQESMLRVDI ASVIGPIFLT WVIVLLFPVI LNSLVYEKQQ HLRIIMKMHG LGDGPYWMIT YAYFLAISTL
401: YIICLMIFGS AIGLKFFRFN DYSIQFIFYF LCINLQISIA FLVSSAFSKV ETASVAAYLY VFGSGLLGGF LFQFMLEGLS FPRGWIFVME LYPGFSLYRG
501: LYEFSQYALK RQLNGSDGMK WKYFSDSAMD EVFYIIIIEW FLALIAAYYM DRVSSSAKDP FLFLKNLIKK SPSPQRHSLQ RLGSSVSVEM EKLDVVEERA
601: KVEQLMLESS TSHAIVCDKL KKVYPGRDGN PPKMAVGGLS IAVPPGECFG MLGPNGAGKT SFINMMTGLV KPTSGTALVE SLDICQDMDK VYTSMGVCPQ
701: HDLLWETLTG REHLLFYGRL KNLKGSDLNQ AIEESLKSVN LSREGVADKP AGKYSGGMKR RLSVAISLIG SPKVVYMDEP STGLDPASRR SLWTAIKGAK
801: KHTAIILTTH SMEEAEFLCD RLGIFVDGRL QCVGNPKELK ARYGGSYVLT MTTSSEHEKD VEMLIQDVSP NAKKIYHIAG TQKFEIPKDE VRIAELFQAV
901: EKAKGNFRVF AWGLADTTLE DVFIKVARTA QASNVFS

Arabidopsis Description

ABCA4ABC transporter A family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT8]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.