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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plasma membrane, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
TargetP:mitochondrion
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G365000.1 Wheat plasma membrane 91.25 89.02
TraesCSU01G138200.1 Wheat plasma membrane 92.29 88.78
TraesCS5A01G534100.3 Wheat cytosol 92.6 88.02
HORVU1Hr1G075620.5 Barley plasma membrane 83.96 84.49
KXG25097 Sorghum plasma membrane 77.08 77.24
Os08t0398300-01 Rice plasma membrane 76.88 77.12
Zm00001d050259_P002 Maize plasma membrane 76.77 74.9
CDX94927 Canola cytosol 8.65 69.75
HORVU5Hr1G056930.20 Barley plasma membrane 67.4 66.22
KRH54520 Soybean plasma membrane, plastid 55.0 65.43
VIT_12s0055g00730.t01 Wine grape extracellular 8.65 65.35
VIT_17s0000g05860.t01 Wine grape plasma membrane, plastid 64.17 64.91
PGSC0003DMT400083070 Potato cytosol 8.33 64.52
Solyc03g113040.2.1 Tomato plastid 62.5 63.49
CDY02120 Canola cytosol, nucleus, plasma membrane 42.92 62.52
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 41.46 62.38
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 31.88 62.32
CDY31786 Canola cytosol, nucleus, plasma membrane 42.5 61.82
KRH63384 Soybean plasma membrane 46.04 60.71
Bra018114.1-P Field mustard cytosol, peroxisome, plasma membrane 39.38 60.1
Solyc03g113060.2.1 Tomato extracellular 58.96 59.96
Bra018113.1-P Field mustard plasma membrane 58.23 59.34
CDY24156 Canola plasma membrane 58.02 59.13
CDY36930 Canola plasma membrane 58.02 59.13
AT3G47790.1 Thale cress plasma membrane 55.21 58.82
AT3G47780.1 Thale cress plasma membrane 57.19 58.72
KRH56933 Soybean plasma membrane, plastid 58.02 58.69
CDX83025 Canola plasma membrane 57.19 58.28
Bra033785.1-P Field mustard plasma membrane 57.08 58.17
CDX68441 Canola plasma membrane 56.98 58.07
KRH03450 Soybean plasma membrane, plastid 57.19 57.55
Bra019513.1-P Field mustard plasma membrane 52.92 56.89
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 52.5 56.88
HORVU1Hr1G075610.7 Barley extracellular, mitochondrion, plasma membrane 54.27 56.45
AT5G61700.1 Thale cress plasma membrane 53.85 56.38
CDY24158 Canola plasma membrane 54.17 56.16
Bra018115.1-P Field mustard plasma membrane 54.17 56.16
CDY23043 Canola cytosol, mitochondrion 29.9 56.05
CDY21797 Canola plasma membrane 52.71 55.97
CDY62599 Canola plasma membrane 50.62 55.93
AT3G47750.1 Thale cress mitochondrion, plasma membrane 54.58 55.92
CDX77421 Canola plasma membrane 54.38 55.83
AT3G47740.1 Thale cress plasma membrane 54.06 55.69
AT5G61740.1 Thale cress plasma membrane 52.6 55.56
AT3G47770.2 Thale cress endoplasmic reticulum, golgi, plasma membrane, plastid 53.54 55.51
CDY02114 Canola plasma membrane 51.25 55.47
CDY39546 Canola plasma membrane 53.96 55.4
CDX68440 Canola cytosol, mitochondrion 8.02 55.4
Bra015049.1-P Field mustard plasma membrane 51.46 55.32
AT3G47760.3 Thale cress plasma membrane 53.85 55.23
PGSC0003DMT400083071 Potato plasma membrane 53.65 55.08
CDY23039 Canola plasma membrane 50.94 55.07
CDX77874 Canola plasma membrane 47.4 54.89
Solyc06g070950.1.1 Tomato plasma membrane 50.62 54.55
GSMUA_Achr7P23890_001 Banana plasma membrane 66.25 54.36
Bra012931.1-P Field mustard cytosol, peroxisome, plasma membrane 33.44 54.22
CDY36931 Canola plastid 52.19 53.81
VIT_07s0095g00600.t01 Wine grape extracellular 3.85 53.62
CDY23798 Canola nucleus, peroxisome, plasma membrane 21.35 53.39
CDY24157 Canola plastid 52.71 53.21
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 53.54 51.87
Bra012927.1-P Field mustard cytosol 32.92 51.38
GSMUA_Achr3P20510_001 Banana plasma membrane 62.08 50.81
Bra033786.1-P Field mustard cytosol, mitochondrion, nucleus 15.62 50.34
HORVU6Hr1G038520.24 Barley endoplasmic reticulum, plasma membrane 48.85 49.95
VIT_18s0041g02240.t01 Wine grape plasma membrane 36.04 47.01
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 20.62 46.48
CDX68439 Canola nucleus 6.98 42.41
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 7.29 41.67
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 7.29 41.67
Solyc06g070930.2.1 Tomato plastid 11.46 40.15
HORVU4Hr1G039510.1 Barley cytosol 6.98 39.88
HORVU3Hr1G089880.8 Barley plastid 6.88 24.26
HORVU1Hr1G075640.9 Barley golgi 23.75 23.29
HORVU7Hr1G098490.2 Barley plastid 6.25 20.55
HORVU4Hr1G025760.12 Barley cytosol 3.33 18.6
HORVU4Hr1G079940.5 Barley cytosol 6.04 18.59
HORVU5Hr1G091750.1 Barley plastid 6.98 17.31
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300UniProt:A0A287Q0T9InterPro:AAA+_ATPaseInterPro:ABCAInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:HORVU4Hr1G087670EnsemblPlants:HORVU4Hr1G087670.8
InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF12698ScanProsite:PS00211PFscan:PS50893
PANTHER:PTHR19229PANTHER:PTHR19229:SF141SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI000B473E39
SEG:seg:::::
Description
No Description!
Coordinates
chrchr4H:-:637790882..637796335
Molecular Weight (calculated)
106391.0 Da
IEP (calculated)
8.915
GRAVY (calculated)
0.072
Length
960 amino acids
Sequence
(BLAST)
001: RRLRPAMEGS RGPAGFATQA NALLRKNLCF QVRPSVKTNV CITVFPTLLC VLLVVMQAVI NREIGQPKYR CGCACVDAAR AADGSCRRTE CGVQYSTQDQ
101: VATCPIPSPP HWPAVLQLPP PESRAVGTAS QPFDGLPGPA CRDARSCPAA FLVTGGNRSL AQRLSGQLFP ALFSPLNFSD YLHTLSNIVP GSDAPAAFRQ
201: FLEPAFIPGN TLYIVQPRCR SNFKQTVSLN AGTKLLKLNV DCIQGLSLWR ENASVINDEL FKGYRQKREN GGGKANEFAA GYDFLSTNKD SLDISIWFNS
301: TYNDNGGVFE MALVRVPRLV NMASNAYIKF LRGTGAGMLL EYVKDMPKVG TELKLDLSSL LGALFFTWIV ELLFPVILTY LVYEKQQKLK IMMKMHGLKS
401: GPYWMITYTY FFALSALYMI LFVTFGSLIG LGFFTTNDYS VQIVFYFIYI NLQIALAFFT ASFFSSVKIA TVVGYMYVFG SGLLGAFLLR FFIQDNSFPE
501: GWLVVMEIIP GFSLYRGLYE FGQYAFIGTT MGTDGMTWTN LSDPVNGMRT VLIIMVVEWA ILLTLAFHLD QVSSLDGGLR KRLLILLKFF KKRTASFRMY
601: SFGRIGSKVI VEMENPDATQ EREAVEQLLL EPNANYAIIC DNLKKVYRGR DRNPDKLAVR GLSLALPKGQ CFGMLGPNGA GKTSFISMMI GLVPPTSGTA
701: YVHGMDIRTD MNEIYTNMGV CPQHDLLWET LTGKEHLLFY GRLKNLKGAE LLKATEDSLK SVNLFHGGVG DKQVGKYSGG MKRRLSVAIS LIGDPKVVFM
801: DEPSTGLDPA SRNSLWSVVK EAKKNRAIIL TTHSMEEAEV LCDRLGIFVD GGFQCIGNAK ELKARYGGTY VLTITTSPEH EQEVEHLVHR LSPNANRIYH
901: ISGTQKFELP KQDVKIASVF HEVESAKCRF SIHAWGLADT TLEDVFIKVA QGAQAFSVNA
Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)
001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS
Arabidopsis Description
ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.