Factsheet for Bra019513.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21797	Canola	plasma membrane	99.44	98.23
CDX77874	Canola	plasma membrane	87.35	94.09
AT3G47790.1	Thale cress	plasma membrane	86.67	85.9
KRH54520	Soybean	plasma membrane, plastid	58.57	64.81
Bra018113.1-P	Field mustard	plasma membrane	67.41	63.91
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.01	62.48
Solyc03g113040.2.1	Tomato	plastid	65.73	62.12
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	34.04	61.91
Bra033785.1-P	Field mustard	plasma membrane	65.29	61.89
Bra018115.1-P	Field mustard	plasma membrane	63.94	61.66
Bra015049.1-P	Field mustard	plasma membrane	61.48	61.48
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	43.67	61.13
KRH63384	Soybean	plasma membrane	49.38	60.58
TraesCS7A01G367700.1	Wheat	plasma membrane	38.52	60.56
Solyc03g113060.2.1	Tomato	extracellular	63.72	60.28
KRH56933	Soybean	plasma membrane, plastid	61.93	58.27
KRH03450	Soybean	plasma membrane, plastid	61.7	57.76
KXG25097	Sorghum	plasma membrane	59.35	55.32
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.62	55.24
TraesCS1A01G343000.1	Wheat	plasma membrane	58.57	54.88
TraesCS1D01G345200.1	Wheat	plasma membrane	58.45	54.83
Os08t0398300-01	Rice	plasma membrane	58.68	54.75
TraesCS1B01G356200.1	Wheat	plasma membrane	57.78	54.2
HORVU1Hr1G075620.5	Barley	plasma membrane	57.33	53.67
Zm00001d050259_P002	Maize	plasma membrane	59.13	53.66
TraesCS5A01G193200.1	Wheat	plasma membrane	56.1	52.96
HORVU4Hr1G087670.8	Barley	mitochondrion	56.89	52.92
TraesCS5D01G195700.1	Wheat	plasma membrane	55.88	52.75
OQU89360	Sorghum	plasma membrane	55.99	52.74
Zm00001d020208_P003	Maize	plasma membrane	55.43	52.22
TraesCS4B01G365000.1	Wheat	plasma membrane	57.45	52.13
TraesCS3D01G368700.2	Wheat	plasma membrane	56.1	51.76
Solyc06g070950.1.1	Tomato	plasma membrane	51.62	51.74
TraesCS7D01G355100.1	Wheat	plastid	55.21	51.62
TraesCSU01G138200.1	Wheat	plasma membrane	57.56	51.5
TraesCS7B01G260800.1	Wheat	plastid	55.1	51.46
TraesCS5B01G188600.1	Wheat	plasma membrane	54.42	51.16
Os06t0589300-01	Rice	plasma membrane	54.31	51.11
Bra012927.1-P	Field mustard	cytosol	35.05	50.89
HORVU5Hr1G056930.20	Barley	plasma membrane	55.66	50.87
EER89983	Sorghum	plastid	54.2	50.73
TraesCS5A01G534100.3	Wheat	cytosol	57.33	50.69
HORVU7Hr1G085680.2	Barley	endoplasmic reticulum, peroxisome, plastid	55.77	50.25
Zm00001d036927_P001	Maize	plasma membrane, plastid	54.09	50.05
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	16.69	50.0
GSMUA_Achr7P23890_001	Banana	plasma membrane	61.03	46.58
GSMUA_Achr3P20510_001	Banana	plasma membrane	58.34	44.42
HORVU3Hr1G030470.1	Barley	cytosol, extracellular, plasma membrane	7.39	39.29
HORVU6Hr1G043820.1	Barley	cytosol, endoplasmic reticulum, plasma membrane	7.28	38.69
HORVU4Hr1G039510.1	Barley	cytosol	6.94	36.9
Solyc06g070930.2.1	Tomato	plastid	11.09	36.13
Bra012928.1-P	Field mustard	plasma membrane	24.97	24.06
Bra018116.1-P	Field mustard	golgi, mitochondrion	26.32	23.83
Bra008779.1-P	Field mustard	plastid	7.17	23.36
Bra004271.1-P	Field mustard	cytosol	6.72	22.73
Bra022481.1-P	Field mustard	plastid	8.06	21.88
Bra012930.1-P	Field mustard	plasma membrane	21.05	20.7
Bra038152.1-P	Field mustard	plasma membrane, vacuole	8.62	18.78
Bra000236.1-P	Field mustard	mitochondrion	21.05	10.21

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra019513	EnsemblPlants:Bra019513.1	EnsemblPlants:Bra019513.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	UniProt:M4DSM0	InterPro:P-loop_NTPase	PFAM:PF00005	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000253F080
SEG:seg	:	:	:	:	:

Description

AT3G47760 (E=8e-296) ATATH4, ATH4 | ATATH4; ATPase, coupled to transmembrane movement of substances / transporter

Coordinates

chrA06:-:12665376..12669870

Molecular Weight (calculated)

100883.0 Da

IEP (calculated)

9.162

GRAVY (calculated)

-0.041

Length

893 amino acids

Sequence
(BLAST)

001: MTDSRPASIL TQADALLRKN LVFQKRNIWS NVRLVTIPFF LCVLLVVIQL LFDSQFNEDH GQCGCLNEKT CGIRYSTSDQ AAFCAIPNPS QWTPLLQIPS
101: PQYRAVTTLY LSHSSPVTFL FTGNNQSLGE TLMRNIYSNS PEFGGDLANY VLGSSSLPAY TNYMDSSFIS ELPIYNIKHQ CSLNSSFSIL IHQPPLSFPK
201: EINCVRGLNL WRNSSLDVNK ELFKGYRKGN QEEKINEYTA AFDFQNTNGN RLNVNVWYNS TYKNNTVIRP MALIRVPRLV NLASNAYLEF LKGSKTKILF
301: EYIKEMPKPE TKLTLDITSL IGPLFFTWVI LLLFPRLRIM MKMHGLGDAP YWIVSYSYFV LVSTLYMLCF AIFGSAIGLN FFRLNDYSIQ LVFFLISINL
401: QISVAFLASA MFSDVKTATV VAYIYVFGTG LLGIFLFQFF LEDPHFPRGW IIAMELYPGF SLYRGLYELS QSAFAADYRG VNGMRWRDFG DGMKEVTCIM
501: LIEWLLLLVS AFYIDQITYS SKHPLFFFLQ SPSKNKQHHY SSNKQISKFV VEMEKPDVCQ EREKVEQYLL ESTGNCAVLC NNLKKVYSGK DGNPQKLAVR
601: GLSLALPQGE CFGMLGPNGA GKTSFINMMT GIIKPSSGSA FVQGLDILTD MDRIYTTIGV CPQHDLLWDK LSGREHLLFY GRLKNLKGSV LTQAVEESLR
701: SVNLFHGGNG DKQVRRYSGG MKRRLSVAIS LIGNPKVVYM DEPSTGLDPA SRKSLWDVVK RAKRKGAIIL TTHSMEEAEV LCDRLGIFVN GSLQCIGNPK
801: ELKGRYGGSY VLTMTTSKEH EQEVEELVHR ISKNAKKIYR TSGTQKFELP KKETKIAEVF QAVEKAKKMF PVVAWGLADT TLEDVFVKVA QTS

Best Arabidopsis Sequence Match ( AT3G47790.1 )
(BLAST)

001: MADSSPASFL TQADALLRKN LVFQKRNIWS NIRLITIPFF LCLLLLVIQM LFDTQFNDVH GQCGCNEKTC GLRYSTSEQA AFCAIPNPPQ WTPLLQIPAP
101: EYRAAIPYPS HTSPATFLFT GNNQSLGNIL MGNMYSNSSG FDGDLAYYVL GSSSFPAYTN HMDSAFISDL PIYNIQHECS PNSSFSILIH QSPLAFPKEV
201: NCVQGLNLWR NSSSDVNNEL FKGYRKGNPD KKINEFAGAF DFQNTNGNNL NVSVWYNSTY KNDTVVRPMA LIRVPRLVNL ASNAYLEFLK GSETKILFEY
301: VKEMPKPETK LSLDIASLIG PLFFTWVILL LFPVILTTLV YEKQQRLRIM MKMHGLGDVP YWIVSYTYFL LISILYMLCF AIFGSLIGLN FFRLNDYSIQ
401: LVFFFICINL QISVAFLASA MFSDVKTATV IAYIYVFGTG LLGIFLFQFF LEDPLFPRGW IIAMELYPGF SLYRGLYELS QSAFAGDYRG IDGMKWRDFG
501: NGMKEVTCIM LIEWLLLLGL AYYIDQIIYS RKHPLFFLLQ STSKKKQHFS DNKISKVVVE MEKPDVCRER EKVEQCLLKS TRDSAVLCNN LKKVYSGKDG
601: NPQKLAVRGL SLALPQGECF GMLGPNGAGK TSFINMMTGI IKPSSGTAFV QGLDILTDMD RIYTTIGVCP QHDLLWEKLS GREHLLFYGR LKNLKGSVLT
701: QAVEESLRSV NLFHGGIGDK QVSKYSGGMK RRLSVAISLI GSPKVVYMDE PSTGLDPASR KSLWDVVKRA KRKGAIILTT HSMEEAEILC DRIGIFVDGS
801: LQCIGNPKEL KSRYGGSYVL TVTTSEEHEK EVEQLVHNIS TNAKKIYRTA GTQKFELPKQ EVKIGEVFKA LEKAKTMFPV VAWGLADTTL EDVFIKVAQT
901: S

Arabidopsis Description

ABCA8ABC transporter A family member 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.