Factsheet for TraesCS5D01G195700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, plasma membrane
MultiLoc:	golgi
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G193200.1	Wheat	plasma membrane	97.67	97.67
TraesCS5B01G188600.1	Wheat	plasma membrane	95.98	95.58
HORVU5Hr1G056930.20	Barley	plasma membrane	95.45	92.43
Zm00001d020208_P003	Maize	plasma membrane	78.12	77.95
OQU89360	Sorghum	plasma membrane	77.91	77.74
TraesCS1D01G345200.1	Wheat	plasma membrane	72.83	72.37
CDX94927	Canola	cytosol	8.46	67.23
TraesCS3D01G368700.2	Wheat	plasma membrane	68.08	66.53
PGSC0003DMT400083070	Potato	cytosol	8.35	63.71
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	63.53	63.33
KRH54520	Soybean	plasma membrane, plastid	53.49	62.7
Solyc03g113040.2.1	Tomato	plastid	62.47	62.54
VIT_12s0055g00730.t01	Wine grape	extracellular	8.14	60.63
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	40.8	60.5
Solyc03g113060.2.1	Tomato	extracellular	60.04	60.17
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	31.18	60.08
CDY02120	Canola	cytosol, nucleus, plasma membrane	41.65	59.79
KRH63384	Soybean	plasma membrane	45.67	59.34
CDY31786	Canola	cytosol, nucleus, plasma membrane	41.23	59.09
KRH56933	Soybean	plasma membrane, plastid	58.14	57.96
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.37	57.71
AT3G47790.1	Thale cress	plasma membrane	54.33	57.05
KRH03450	Soybean	plasma membrane, plastid	57.19	56.71
AT3G47780.1	Thale cress	plasma membrane	55.92	56.58
Bra019513.1-P	Field mustard	plasma membrane	52.75	55.88
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	51.9	55.42
CDY24156	Canola	plasma membrane	55.18	55.41
CDX68441	Canola	plasma membrane	55.07	55.31
CDY36930	Canola	plasma membrane	54.97	55.2
Bra018113.1-P	Field mustard	plasma membrane	54.86	55.1
CDY21797	Canola	plasma membrane	52.64	55.09
CDY23043	Canola	cytosol, mitochondrion	29.81	55.08
CDX77874	Canola	plasma membrane	48.1	54.89
TraesCS1D01G345300.1	Wheat	mitochondrion, plasma membrane	54.86	54.8
CDX83025	Canola	plasma membrane	54.55	54.78
Bra033785.1-P	Field mustard	plasma membrane	54.44	54.67
CDY24158	Canola	plasma membrane	53.28	54.43
TraesCS7D01G355100.1	Wheat	plastid	54.76	54.24
Solyc06g070950.1.1	Tomato	plasma membrane	50.95	54.1
GSMUA_Achr7P23890_001	Banana	plasma membrane	66.81	54.02
Bra018115.1-P	Field mustard	plasma membrane	52.75	53.89
VIT_07s0095g00600.t01	Wine grape	extracellular	3.91	53.62
PGSC0003DMT400083071	Potato	plasma membrane	52.96	53.58
AT5G61700.1	Thale cress	plasma membrane	51.9	53.54
CDX68440	Canola	cytosol, mitochondrion	7.82	53.24
AT5G61740.1	Thale cress	plasma membrane	51.06	53.14
AT3G47760.3	Thale cress	plasma membrane	52.54	53.1
CDY39546	Canola	plasma membrane	52.43	53.05
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	51.9	53.02
CDX77421	Canola	plasma membrane	52.33	52.94
CDY62599	Canola	plasma membrane	48.63	52.93
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	52.33	52.83
AT3G47740.1	Thale cress	plasma membrane	52.01	52.79
CDY02114	Canola	plasma membrane	49.47	52.76
Bra015049.1-P	Field mustard	plasma membrane	49.58	52.52
CDY23039	Canola	plasma membrane	48.73	51.91
CDY36931	Canola	plastid	50.63	51.45
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.03	51.18
CDY24157	Canola	plastid	51.06	50.79
CDY23798	Canola	nucleus, peroxisome, plasma membrane	20.51	50.52
TraesCS6D01G170100.1	Wheat	plastid	49.05	49.63
Bra012927.1-P	Field mustard	cytosol	32.24	49.59
GSMUA_Achr3P20510_001	Banana	plasma membrane	61.21	49.36
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	14.9	47.32
VIT_18s0041g02240.t01	Wine grape	plasma membrane	36.36	46.74
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.72	46.01
CDX68439	Canola	nucleus	6.87	41.14
Solyc06g070930.2.1	Tomato	plastid	11.1	38.32
TraesCS3D01G393600.2	Wheat	plastid	7.72	26.45
TraesCS1D01G345100.2	Wheat	mitochondrion, plasma membrane, plastid	24.31	23.83
TraesCS7D01G420100.1	Wheat	cytosol, golgi, mitochondrion	6.34	22.81
TraesCS4D01G332100.1	Wheat	cytosol	6.45	21.33
TraesCS5D01G377300.1	Wheat	cytosol, peroxisome, plastid	6.87	16.46

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF12698	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G195700	EnsemblPlants:TraesCS5D01G195700.1	TIGR:cd03263	SEG:seg

Description

No Description!

Coordinates

chr5D:+:299398628..299404920

Molecular Weight (calculated)

105638.0 Da

IEP (calculated)

8.307

GRAVY (calculated)

0.120

Length

946 amino acids

Sequence
(BLAST)

001: MDSRRRPAGF LTQANALLRK NLCLQKRNLK TNIGITIFPI LICVLLLVLQ NIINNELDKP KYNCGCACVD TDMYGTCRKR ECGVQYSTLE QVWSCAIPSP
101: PRWPALIQVP QPQFRAVRTV SQPFDDLPDP SCRDSLSCPA SVLITGKDRG FAESVAGGLF PVFAPTLNVT DYLDALSRIV VGSDTIPGYT QLVEPAFSSS
201: DTLYLLQPQC VPFLSQTISY NARGIPLQLN IQCVEGVLLW RESTSVINDE LLKGYIQRGG KTNEFIAGYD FLSSTEYGLG INVWYNSTYG GKTAFSFIAA
301: LRVPRLVNAV SNAYLKYIRG PGMEVLLEYV KDMPKVGTSY RFDLSSLISP LFFTWIVELL FPVMLTYLVY EKQQKLKIMM KMQGLKDGPY WMISYGYFFV
401: LSVVYMTFFV IFGSLIGLNF FRVNNYGIQI VFFFVYINLQ IAFAFFVASF FSSVKIATVI GYIYVFGSGL LGAFLFRFFI EDINFSRGWI LVMEIVPGFS
501: LYRGLYELGQ YAFSGNAMGA TGMMWENLKD PINGMRDILI VMTVEWALML VLAFYLDQVS SIGGSVGNPL LFFRCLQKKY APPLQSSFVQ QNHKVAVDME
601: KADVAQERHV VEQLLMDSNA NQAIICDNLR KVYPGKDGNP DKLAVRGLSL ALPKGQCFGM LGPNGAGKTS FISMMVGLTK PTSGTAYAHG MDIRMDMDDI
701: YTNMGVCPQH DLLWETLTGK EHLFFYARLK NLKGAALVKA VNDSLKSVNL FHGGVGDKQV GKYSGGMKRR LSVAISLIGD PKVVYMDEPS TGLDPASRNN
801: LWNIVKEAKR NRAIILTTHS MEEAEVLCDR LGIFVDGEFQ CLGNPRELKA RYGGAYIFTV TTPPEQESEI EQLVHRLSPS ANKIYNLSGT QKFELPKQEV
901: RIADVFHAVE RAKSRLSIHA WGLVDTTLED VFIKVAKGAP VFNDVA

Best Arabidopsis Sequence Match ( AT3G47740.1 )
(BLAST)

001: MADSGPASFW TRANAILRKN LTYQKRNIWS NVRLIMIPFY LCIVLVFIQA LFDSQVNNSL DNQCGCQCID KLGDGKCQMT CGLEYSTRDQ GFFCAIPKPQ
101: PWPPLILIPR PEYRALDANF TNDSCRRKNS CPVTILFTGN NHSLGAVLSR NLLRRPFAMN SSDLLFSLAN NVLATTFKGS ATNYLDAGIV SDGSIYNIQP
201: RCPPNSNFSI SIGQSPLNFT KDMRCVQGLN LWRNNSIEVN LELFEGYHKG NSDGMINEIV AAYDLFDTNM TNFNVNIWFN ATYKDEARNQ PYKVVRVPRL
301: VNWVSNAYLQ YLQGPRTKML FEFVKEMPKP ETKLRLDIAS LIGPIFFTWV ILLLLPVILN SLVYEKQQRL RIIMKMHGLG DGPYWIISYA YFLALSTFYI
401: IFLMIFGSVI GLKFFLLNDF SLQFSFYFVY INLQISIAFL LSSAFSKVET ASVAAYLYVF GSGLLGMFLF QFLLEGLSFP RRWIFVMELY PGFSLYRGLY
501: EFSQNAYQGN LNGKDGMKWK YFSDNAIDEV FYIIIVEWFV ALIATYYIDK MSSSGKDLLF FLKNQNPFKI SHSLQKQVSA ISVEMEKLDV IHESEKVAQL
601: MLESSTSHAI VCDKLRKVYP GRDGNPPKKA VRVLSLAVPS GECFGMLGPN GAGKTSFINM MTGLVKPTSG AAFVQGLDIC KDMDRVYTSM GVCPQHDLLW
701: ETLTGREHLL FYGRLKNLKG VDLNQAVEES LRSVNLFHGG VADKPAGKYS GGMKRRLSVA ISLIGNPKVV YMDEPSTGLD PASRKNLWTV IKNAKRHTAI
801: ILTTHSMEEA EFLCDRLGIF VDGRLQCIGN PKELKGRYGG SYVLTMTTSS EHEKDVEMLV QEVSPNVKKI YHIAGTQKFE IPKDEVRISE VFQVVEKAKS
901: NFKVFAWGLA DTTLEDVFIK VARTAQAFNV FS

Arabidopsis Description

ABCA3ABC transporter A family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEH6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.