Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- endoplasmic reticulum 1
- plastid 2
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G211300.1 | Wheat | cytosol, peroxisome, plasma membrane | 82.25 | 96.85 |
| TraesCS6A01G183200.1 | Wheat | plasma membrane | 94.76 | 95.17 |
| HORVU6Hr1G038520.24 | Barley | endoplasmic reticulum, plasma membrane | 91.23 | 90.84 |
| Os02t0107900-00 | Rice | cytosol | 20.11 | 78.01 |
| EES04733 | Sorghum | plasma membrane | 68.45 | 67.16 |
| Zm00001d016396_P001 | Maize | plasma membrane | 51.76 | 63.35 |
| TraesCS1D01G345200.1 | Wheat | plasma membrane | 50.37 | 49.47 |
| TraesCS5D01G195700.1 | Wheat | plasma membrane | 49.63 | 49.05 |
| TraesCS1D01G345300.1 | Wheat | mitochondrion, plasma membrane | 46.42 | 45.83 |
| TraesCS3D01G368700.2 | Wheat | plasma membrane | 47.38 | 45.76 |
| TraesCS7D01G355100.1 | Wheat | plastid | 46.42 | 45.45 |
| TraesCS3D01G393600.2 | Wheat | plastid | 8.34 | 28.26 |
| TraesCS7D01G420100.1 | Wheat | cytosol, golgi, mitochondrion | 6.63 | 23.57 |
| TraesCS1D01G345100.2 | Wheat | mitochondrion, plasma membrane, plastid | 24.17 | 23.42 |
| TraesCS4D01G332100.1 | Wheat | cytosol | 6.42 | 20.98 |
| TraesCS5D01G377300.1 | Wheat | cytosol, peroxisome, plastid | 7.7 | 18.23 |
Protein Annotations
| MapMan:24.1.3.2.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCA | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PFAM:PF12698 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19229 | PANTHER:PTHR19229:SF127 | SMART:SM00382 |
| SUPFAM:SSF52540 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6D01G170100 | EnsemblPlants:TraesCS6D01G170100.1 | TIGR:cd03263 | SEG:seg |
Description
No Description!
Coordinates
chr6D:+:156563113..156571544
Molecular Weight (calculated)
103526.0 Da
IEP (calculated)
8.198
GRAVY (calculated)
0.036
Length
935 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSLQQTN ALFRKNLVIQ RRACKTNCCL ILFPLILCAG IGGLQIAINR AVKRDTTPLN CNCSNAVVPA NTTGGPACPE GCPQPRAPKW PPVVHIPPSA
101: TSRFGRGPPG ASCGAQGSCA ATFLVTGANQ SFVGSAMGNM IPVHDASVNV SADDISALAD FVLADYSGYS GSPLVDTFLQ NKCTPNLTLS YSFVDGNETG
201: TQDVDCTEGL MLWRDSSWLI SDDLYSGYTN RSNEFAAAYD FLSSDQGNFN LIISYNSTYE FDAYDGLPIP VFQFFGGNKP RLLEVPRLTN MASNAYLRLI
301: GNGLKISFDF VKEMPRAGRS WSTYDLTSII GPLPYVLTIQ LLFPVILTNI VYEKQKKLRI MMKMHGLGDL PYWTISYCYF ILLSMLYLLS FMVFGTVFGF
401: TFFRLNSYGV QFVFYFAYMS LQISFAFLMA TCFSNVRTAA VIGYFYVFGS GLIADYFFKP YIEDIFISRS WIILLELFPP FSLYRIVYEF SQSASLVSQI
501: DRTGMQWSDL NDPKNGMTSV LTIMVLEWIL FLLLSLYLDH FGSFQSGIRR AVLLLHSRRA GNRSQSSQQQ ITQIQEFKAS VEMERTDVIK EREMVGQLLQ
601: EPNSSYSVIC DNLKKVYPGK DGNSKKIAVR ELSLSMARGQ CFGVLGPNGA GKTTLINMLT GFTKPTSGTA YIEGMDIRLD MDKIYTGIGV CPQHDLLWEN
701: LTGREHLMFY GRLKKLKGAK LAQAIEQSLK SVRLFDGGVP DKLVQKYSGG MKRRLSVAIS LIGDPKVVYM DEPSSGLDPA SRKDLWKAVK SAKQDRAIIL
801: TTHSMEEAEV LCDRIGIIAD GTLQCIGNSR ELKTKYGGSY VLTITTTAGE EAEEEVAKLV QSISPAVSRV YRISGTQKFE MPKQEVRISA VFHVMESAKS
901: RTTVLAWGLA DTTLEDVFIR VAKESEVSSV TSSAR
101: TSRFGRGPPG ASCGAQGSCA ATFLVTGANQ SFVGSAMGNM IPVHDASVNV SADDISALAD FVLADYSGYS GSPLVDTFLQ NKCTPNLTLS YSFVDGNETG
201: TQDVDCTEGL MLWRDSSWLI SDDLYSGYTN RSNEFAAAYD FLSSDQGNFN LIISYNSTYE FDAYDGLPIP VFQFFGGNKP RLLEVPRLTN MASNAYLRLI
301: GNGLKISFDF VKEMPRAGRS WSTYDLTSII GPLPYVLTIQ LLFPVILTNI VYEKQKKLRI MMKMHGLGDL PYWTISYCYF ILLSMLYLLS FMVFGTVFGF
401: TFFRLNSYGV QFVFYFAYMS LQISFAFLMA TCFSNVRTAA VIGYFYVFGS GLIADYFFKP YIEDIFISRS WIILLELFPP FSLYRIVYEF SQSASLVSQI
501: DRTGMQWSDL NDPKNGMTSV LTIMVLEWIL FLLLSLYLDH FGSFQSGIRR AVLLLHSRRA GNRSQSSQQQ ITQIQEFKAS VEMERTDVIK EREMVGQLLQ
601: EPNSSYSVIC DNLKKVYPGK DGNSKKIAVR ELSLSMARGQ CFGVLGPNGA GKTTLINMLT GFTKPTSGTA YIEGMDIRLD MDKIYTGIGV CPQHDLLWEN
701: LTGREHLMFY GRLKKLKGAK LAQAIEQSLK SVRLFDGGVP DKLVQKYSGG MKRRLSVAIS LIGDPKVVYM DEPSSGLDPA SRKDLWKAVK SAKQDRAIIL
801: TTHSMEEAEV LCDRIGIIAD GTLQCIGNSR ELKTKYGGSY VLTITTTAGE EAEEEVAKLV QSISPAVSRV YRISGTQKFE MPKQEVRISA VFHVMESAKS
901: RTTVLAWGLA DTTLEDVFIR VAKESEVSSV TSSAR
001: MANHVPASFL TRANALFRKN LTYQKRNIWS NVRLIVIPFY LCVLLVGIQV LFDTQVNNSA DNRCGCRCIH KNGDGKCERK SCGLQYSSLT QASFCAFPNP
101: PPLLPLLQIP RPETRLVDPA RSSCRRTGSC PVTILVTGNN HTLGETLSRN LLSTSFAVNS SDHFLRNLAY NVLGTISEAD YTNYLDPGIH SDLPIFQIRP
201: YCTPTTNLSF SFRQPPITFH KEVRCVQGLN LWRNNSVEVN DEIFKGYRQG NHEEIINEVA AAYDLLDTDR NKFNVTIWYN SSYKGNFKVQ DRRVKYVRVP
301: RSVNMVSNAY LRFLRGPGTK MLFDFVKEMP KQESMLRVDI ASVIGPIFLT WVIVLLFPVI LNSLVYEKQQ HLRIIMKMHG LGDGPYWMIT YAYFLAISTL
401: YIICLMIFGS AIGLKFFRFN DYSIQFIFYF LCINLQISIA FLVSSAFSKV ETASVAAYLY VFGSGLLGGF LFQFMLEGLS FPRGWIFVME LYPGFSLYRG
501: LYEFSQYALK RQLNGSDGMK WKYFSDSAMD EVFYIIIIEW FLALIAAYYM DRVSSSAKDP FLFLKNLIKK SPSPQRHSLQ RLGSSVSVEM EKLDVVEERA
601: KVEQLMLESS TSHAIVCDKL KKVYPGRDGN PPKMAVGGLS IAVPPGECFG MLGPNGAGKT SFINMMTGLV KPTSGTALVE SLDICQDMDK VYTSMGVCPQ
701: HDLLWETLTG REHLLFYGRL KNLKGSDLNQ AIEESLKSVN LSREGVADKP AGKYSGGMKR RLSVAISLIG SPKVVYMDEP STGLDPASRR SLWTAIKGAK
801: KHTAIILTTH SMEEAEFLCD RLGIFVDGRL QCVGNPKELK ARYGGSYVLT MTTSSEHEKD VEMLIQDVSP NAKKIYHIAG TQKFEIPKDE VRIAELFQAV
901: EKAKGNFRVF AWGLADTTLE DVFIKVARTA QASNVFS
101: PPLLPLLQIP RPETRLVDPA RSSCRRTGSC PVTILVTGNN HTLGETLSRN LLSTSFAVNS SDHFLRNLAY NVLGTISEAD YTNYLDPGIH SDLPIFQIRP
201: YCTPTTNLSF SFRQPPITFH KEVRCVQGLN LWRNNSVEVN DEIFKGYRQG NHEEIINEVA AAYDLLDTDR NKFNVTIWYN SSYKGNFKVQ DRRVKYVRVP
301: RSVNMVSNAY LRFLRGPGTK MLFDFVKEMP KQESMLRVDI ASVIGPIFLT WVIVLLFPVI LNSLVYEKQQ HLRIIMKMHG LGDGPYWMIT YAYFLAISTL
401: YIICLMIFGS AIGLKFFRFN DYSIQFIFYF LCINLQISIA FLVSSAFSKV ETASVAAYLY VFGSGLLGGF LFQFMLEGLS FPRGWIFVME LYPGFSLYRG
501: LYEFSQYALK RQLNGSDGMK WKYFSDSAMD EVFYIIIIEW FLALIAAYYM DRVSSSAKDP FLFLKNLIKK SPSPQRHSLQ RLGSSVSVEM EKLDVVEERA
601: KVEQLMLESS TSHAIVCDKL KKVYPGRDGN PPKMAVGGLS IAVPPGECFG MLGPNGAGKT SFINMMTGLV KPTSGTALVE SLDICQDMDK VYTSMGVCPQ
701: HDLLWETLTG REHLLFYGRL KNLKGSDLNQ AIEESLKSVN LSREGVADKP AGKYSGGMKR RLSVAISLIG SPKVVYMDEP STGLDPASRR SLWTAIKGAK
801: KHTAIILTTH SMEEAEFLCD RLGIFVDGRL QCVGNPKELK ARYGGSYVLT MTTSSEHEKD VEMLIQDVSP NAKKIYHIAG TQKFEIPKDE VRIAELFQAV
901: EKAKGNFRVF AWGLADTTLE DVFIKVARTA QASNVFS
Arabidopsis Description
ABCA4ABC transporter A family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT8]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.