Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • nucleus 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, peroxisome, plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:nucleus
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31786 Canola cytosol, nucleus, plasma membrane 86.98 50.61
CDY02120 Canola cytosol, nucleus, plasma membrane 86.46 50.38
KRG88422 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 54.95 42.97
CDY62599 Canola plasma membrane 87.24 38.55
HORVU6Hr1G043820.1 Barley cytosol, endoplasmic reticulum, plasma membrane 15.62 35.71
HORVU4Hr1G039510.1 Barley cytosol 15.1 34.52
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 37.76 34.04
CDY24573 Canola plasma membrane 14.06 33.96
HORVU3Hr1G030470.1 Barley cytosol, extracellular, plasma membrane 14.84 33.93
CDY23043 Canola cytosol, mitochondrion 42.97 32.23
Bra012931.1-P Field mustard cytosol, peroxisome, plasma membrane 47.66 30.91
CDY02114 Canola plasma membrane 67.97 29.43
CDY23039 Canola plasma membrane 67.45 29.17
KRH54520 Soybean plasma membrane, plastid 58.07 27.63
Solyc06g070920.2.1 Tomato extracellular, plasma membrane 45.05 27.12
CDY36930 Canola plasma membrane 66.41 27.07
CDY24156 Canola plasma membrane 65.89 26.86
CDX83025 Canola plasma membrane 65.62 26.75
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 61.2 26.52
CDX77874 Canola plasma membrane 56.77 26.3
CDX68441 Canola plasma membrane 63.28 25.8
CDY24158 Canola plasma membrane 61.98 25.7
CDX77421 Canola plasma membrane 60.42 24.81
CDY39546 Canola plasma membrane 60.16 24.71
CDY36931 Canola plastid 58.85 24.27
Solyc03g113040.2.1 Tomato plastid 58.59 23.81
CDY24157 Canola plastid 58.85 23.76
KRH56933 Soybean plasma membrane, plastid 57.55 23.29
CDY21797 Canola plasma membrane 54.17 23.01
TraesCS7A01G367700.1 Wheat plasma membrane 33.85 22.89
Solyc03g113060.2.1 Tomato extracellular 55.99 22.78
KRH03450 Soybean plasma membrane, plastid 56.25 22.64
Solyc06g070950.1.1 Tomato plasma membrane 51.82 22.33
KXG25097 Sorghum plasma membrane 54.17 21.71
Zm00001d050259_P002 Maize plasma membrane 55.47 21.65
Os08t0398300-01 Rice plasma membrane 53.39 21.42
TraesCS1A01G343000.1 Wheat plasma membrane 53.12 21.41
HORVU4Hr1G087670.8 Barley mitochondrion 53.39 21.35
TraesCS1B01G356200.1 Wheat plasma membrane 52.86 21.32
TraesCS1D01G345200.1 Wheat plasma membrane 52.86 21.32
HORVU1Hr1G075620.5 Barley plasma membrane 52.6 21.17
TraesCS4B01G365000.1 Wheat plasma membrane 53.39 20.83
TraesCS5D01G195700.1 Wheat plasma membrane 50.52 20.51
TraesCS5A01G193200.1 Wheat plasma membrane 50.52 20.51
TraesCSU01G138200.1 Wheat plasma membrane 52.6 20.24
TraesCS5B01G188600.1 Wheat plasma membrane 49.48 20.0
TraesCS5A01G534100.3 Wheat cytosol 52.6 20.0
Zm00001d020208_P003 Maize plasma membrane 48.96 19.83
OQU89360 Sorghum plasma membrane 48.96 19.83
HORVU5Hr1G056930.20 Barley plasma membrane 50.26 19.75
TraesCS3D01G368700.2 Wheat plasma membrane 49.74 19.73
EER89983 Sorghum plastid 47.14 18.97
Os06t0589300-01 Rice plasma membrane 46.88 18.97
TraesCS7D01G355100.1 Wheat plastid 47.14 18.95
Zm00001d036927_P001 Maize plasma membrane, plastid 47.14 18.76
TraesCS7B01G260800.1 Wheat plastid 46.61 18.72
GSMUA_Achr7P23890_001 Banana plasma membrane 56.25 18.46
HORVU7Hr1G085680.2 Barley endoplasmic reticulum, peroxisome, plastid 47.14 18.26
GSMUA_Achr3P20510_001 Banana plasma membrane 54.69 17.9
KRH63384 Soybean plasma membrane 28.91 15.25
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 11.46 12.05
CDY62596 Canola cytosol, plasma membrane, vacuole 8.59 10.75
CDX68435 Canola mitochondrion, plastid 7.29 10.73
CDY02116 Canola plasma membrane 22.92 10.48
CDY64180 Canola plasma membrane 16.15 9.89
CDY23800 Canola plasma membrane 23.44 9.84
CDY23042 Canola plasma membrane 23.96 9.82
CDY24159 Canola golgi, mitochondrion 23.7 9.71
CDY23040 Canola plasma membrane 23.7 9.54
CDY36933 Canola golgi, mitochondrion 23.7 9.43
CDY02118 Canola plasma membrane 23.96 9.25
CDY52820 Canola cytosol, nucleus, plasma membrane 20.83 9.11
Solyc06g070930.2.1 Tomato plastid 6.25 8.76
CDY39288 Canola cytosol 4.17 8.08
CDX68436 Canola plasma membrane 5.99 7.82
CDX68439 Canola nucleus 3.12 7.59
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 3.39 7.26
CDY16404 Canola plastid 5.99 6.99
CDX68434 Canola plasma membrane 12.76 6.9
CDY01873 Canola cytosol 4.69 6.82
CDX96058 Canola cytosol 4.69 6.82
CDY57805 Canola plastid 5.73 6.69
CDY23799 Canola cytosol, peroxisome, plasma membrane 3.39 6.37
CDY58413 Canola cytosol, plastid 3.65 5.11
CDX69605 Canola plastid 3.65 5.11
CDY62594 Canola cytosol 4.95 4.16
CDY35403 Canola mitochondrion, plasma membrane 19.27 3.98
CDY22536 Canola mitochondrion, plasma membrane 19.01 3.94
CDX94927 Canola cytosol 0.78 2.52
CDX68440 Canola cytosol, mitochondrion 0.78 2.16
Protein Annotations
MapMan:24.1.3.2.1Gene3D:3.40.50.300GO:A0A078GGN9UniProt:A0A078GGN9InterPro:ABCAEnsemblPlants:CDY23798
ProteinID:CDY23798ProteinID:CDY23798.1ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00024193001InterPro:P-loop_NTPasePANTHER:PTHR19229PANTHER:PTHR19229:SF141
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EE8299SEG:seg::
Description
BnaA01g21490DBnaA01g21490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGN9]
Coordinates
chrLK032149:-:221942..223944
Molecular Weight (calculated)
43124.6 Da
IEP (calculated)
8.911
GRAVY (calculated)
0.054
Length
384 amino acids
Sequence
(BLAST)
001: MATLSRKNSD RNNSADVNNE LFKGSYRGNP AGITNEIAVA YDLMSTDKKN FNVTICSPIC QSDIKCLSEM NTDIASLLGP LFFTWVVLLL FPVILTSLVY
101: EKQERLRIIM KMHGLGDGLK YFRLNSYTIQ SVFYFIYLNL QIAIGFLVSS IFSKVKTVTV VAYILVYGTG LLGSFLFQTM LENQSFPEEW IVALELYPGF
201: SLYRGLYEFS QYASRGNGMK WQDLSDSGMG EVLCIMSIEW FLALIIAFYI DQVFSSGKHP FFFLNPFKKS SSIPSKPTVQ RVDSKKVSID MGKIDVSQER
301: EKVQQLRNEG RAGHAILCDN LKKVYPGRDG NPPKMAVRGL YLDVPSGECF GMLGPNGAGK TSFISMVSFT KTVPQTKVIE CQRL
Best Arabidopsis Sequence Match ( AT5G61700.1 )
(BLAST)
001: MVNPSPASFW TQANALLRKN LTYQRKHIWT NVRLILVPLF LCLILLAIQQ VLDALMKGVS DMSNCGGNVT LPGGICPIPN PPSLPPMLQI PQHELRSVKT
101: DFFSYKDLPD KLCRETGSCP VTILFTGDKL PLGKALSANI FSTSFVVNSS DLLPTLANNV LGSTEAAGED NYEDPGIASD LPIYSIQPSC SANSTWPLSL
201: GQIQTAVKCV QGLCLWRNNS VEVNDELFKG SWRGNPAGMP NEIVAAYDLM STDRKNFNVT IWYNSTYNDE FATGQALKLV RVPRSINLIS NAYLKFLKGP
301: GTRILFEFLK EVPKEETKMN QDIASLLGPL FFTWVVLLLF PVILTSLVYE KQERLRIIMK MHGLGDGPYW MISYAYFLTI SMLYVISLVG FGSAIGLKYF
401: RRNDYSIQFV FYFIYSNLQI SLAFLVSSIF SKVKTVTVIA YILVYGTGLL GSFLFQKMIE TQSFPEEWIL AMELYPGFSL YRGLYEFSQY ASRGNGMKWQ
501: DLSDSGMGEV FCIMSVEWFL ALIVAYYIDQ VFTSGKHPFF FLVNLFKSPS SLPRRPTVQR LDSKRVFIDM DKHDVTQERE SVQKLRNEGS TGHAILCDNL
601: KKVYPGRDGN PPKMAVRGLY LSVSSGECFG MLGPNGAGKT SFISMMTGLL KPSSGTALVQ GLDICKDMNK VYTSMGVCPQ HDLLWETLTG REHLLFYGRL
701: KNIKGSDLTQ AVEESLKSVS LYDGGVGDKP AGNYSGGMKR RLSVAISLIG NPKVVYLDEP STGLDPASRK NLWNVIKRAK QNTAIILTTH SMEEAEFLCD
801: RLGIFVDGGL QCIGNSKELK SRYGGSYVFT MTTSSKHEEE VERLVESVSP NAKKIYHLAG TQKFELPKQE VRIAEVFRAV EKAKANFTVF AWGLADTTLE
901: DVFIKVARTA QAFISLS
Arabidopsis Description
ABCA12ABC transporter A family member 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLT8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.