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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 5
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008779.1-P Field mustard plastid 97.81 97.81
CDX69605 Canola plastid 96.72 96.72
AT5G14100.1 Thale cress plastid 90.15 88.85
Solyc02g068180.2.1 Tomato plastid 66.79 66.79
TraesCS3A01G399500.1 Wheat plastid 63.87 65.54
KXG28389 Sorghum plastid 64.23 64.71
VIT_14s0068g01730.t01 Wine grape plastid 66.79 64.44
TraesCS3B01G432400.1 Wheat plastid 64.23 64.23
TraesCS3D01G393600.2 Wheat plastid 64.6 64.13
KRG94568 Soybean mitochondrion 60.22 63.22
HORVU3Hr1G089880.8 Barley plastid 62.41 62.87
Os11t0490800-02 Rice plastid 60.95 57.79
GSMUA_Achr1P13520_001 Banana plastid 62.41 54.63
Zm00001d007328_P003 Maize plastid 58.39 52.81
TraesCS3A01G399400.1 Wheat cytosol 36.5 39.53
CDY01873 Canola cytosol 23.72 24.62
CDX96058 Canola cytosol 23.72 24.62
CDY16404 Canola plastid 24.82 20.67
CDY57805 Canola plastid 24.82 20.67
CDX68439 Canola nucleus 9.85 17.09
CDY39288 Canola cytosol 10.95 15.15
CDY23043 Canola cytosol, mitochondrion 22.26 11.91
CDX68436 Canola plasma membrane 12.41 11.56
CDY02120 Canola cytosol, nucleus, plasma membrane 22.99 9.56
CDY31786 Canola cytosol, nucleus, plasma membrane 22.99 9.55
CDY62594 Canola cytosol 15.33 9.19
CDY64180 Canola plasma membrane 19.71 8.61
CDX68434 Canola plasma membrane 20.8 8.03
CDY02116 Canola plasma membrane 23.36 7.62
CDX77874 Canola plasma membrane 22.99 7.6
CDX68438 Canola endoplasmic reticulum, extracellular, plasma membrane 11.68 7.51
CDY62599 Canola plasma membrane 23.36 7.36
CDY36932 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 23.72 7.34
CDX77421 Canola plasma membrane 24.82 7.27
CDY02114 Canola plasma membrane 23.36 7.22
CDY23039 Canola plasma membrane 23.36 7.21
CDY36931 Canola plastid 24.45 7.2
CDX68440 Canola cytosol, mitochondrion 3.65 7.19
CDY39546 Canola plasma membrane 24.45 7.17
CDY21797 Canola plasma membrane 23.36 7.08
CDY24157 Canola plastid 24.45 7.05
CDY24159 Canola golgi, mitochondrion 23.72 6.94
CDX68441 Canola plasma membrane 23.72 6.9
CDY36930 Canola plasma membrane 23.72 6.9
CDY24156 Canola plasma membrane 23.72 6.9
CDX83025 Canola plasma membrane 23.72 6.9
CDY24158 Canola plasma membrane 22.99 6.8
CDY36933 Canola golgi, mitochondrion 23.72 6.74
CDX94927 Canola cytosol 2.92 6.72
CDY52820 Canola cytosol, nucleus, plasma membrane 21.53 6.72
CDY23040 Canola plasma membrane 23.36 6.71
CDY23800 Canola plasma membrane 21.9 6.56
CDY23042 Canola plasma membrane 21.17 6.19
CDY02118 Canola plasma membrane 21.17 5.83
CDY23798 Canola nucleus, peroxisome, plasma membrane 5.11 3.65
CDY22536 Canola mitochondrion, plasma membrane 22.63 3.35
CDY35403 Canola mitochondrion, plasma membrane 22.63 3.33
CDY02115 Canola extracellular, mitochondrion, plasma membrane, plastid 2.55 1.92
CDX68435 Canola mitochondrion, plastid 1.82 1.92
CDY24573 Canola plasma membrane 1.09 1.89
CDY62596 Canola cytosol, plasma membrane, vacuole 1.82 1.63
CDY02119 Canola endoplasmic reticulum, plasma membrane, plastid 0.36 0.56
CDY23799 Canola cytosol, peroxisome, plasma membrane 0.36 0.49
Protein Annotations
Gene3D:3.40.50.300MapMan:35.1GO:A0A078J3J4UniProt:A0A078J3J4InterPro:AAA+_ATPaseInterPro:ABC_transporter-like
EnsemblPlants:CDY58413ProteinID:CDY58413ProteinID:CDY58413.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00023587001InterPro:IPR003439
InterPro:P-loop_NTPasePFAM:PF00005PFscan:PS50893PANTHER:PTHR43553PANTHER:PTHR43553:SF12SMART:SM00382
SUPFAM:SSF52540UniParc:UPI0004EE715ESEG:seg:::
Description
BnaC09g54590DBnaC09g54590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3J4]
Coordinates
chrLK033666:+:25196..27444
Molecular Weight (calculated)
30493.1 Da
IEP (calculated)
8.985
GRAVY (calculated)
-0.087
Length
274 amino acids
Sequence
(BLAST)
001: MLLSTVSSFA PVFRIGEPPA CAVGWKQALR FRRTTKRSVI SCDYSCLEVR DICYRPPGTE LNILNGVNLS LREKSFGLIF GKSGSGKTTL LQLLAGLNKP
101: TSGSICIQRY GDDGQPNADS ELFPTEKVGI VFQFPERFFV ADNVLDEITF GWPRQKGSLQ LKERLTSNLQ RAFNWVGLDS IPLDKDPQLL SGGYKRRLAL
201: AIQLVQTPDL LILDEPLAGL DWKARADVAK LLKHLKKELT LLVVSHDLRE LATLVDQSWR MESAGVLVAE RPPV
Best Arabidopsis Sequence Match ( AT5G14100.1 )
(BLAST)
001: MAVSTFSSPT PVFGIAEPPA SFSSTAIGWK QPLRFRRTKK PRVISCDYSC IEVRDVCYRP PGTQLNILNG VNFSLREKSF GLIFGKSGSG KTTLLQLLAG
101: LNKPTSGSIC IQGYGDDGQP KADPDLLPTE KVGIVFQFPE RFFVADNVLD EITFGWPRQK GSLQLKEQLT SNLQRAFNWV GLDSIPLDKD PQLLSGGYKR
201: RLALAIQLVQ TPDLLILDEP LAGLDWKARA DVAKLLKHLK KELTLLVVSH DLRELAALVD QSWRMETGGV LVAERPPL
Arabidopsis Description
ABCI11ABC transporter I family member 11, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEF6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.