Factsheet for TraesCS3A01G399500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G432400.1	Wheat	plastid	96.25	93.8
TraesCS3D01G393600.2	Wheat	plastid	95.51	92.39
HORVU3Hr1G089880.8	Barley	plastid	91.01	89.34
KXG28389	Sorghum	plastid	84.27	82.72
Os11t0490800-02	Rice	plastid	80.52	74.39
Zm00001d007328_P003	Maize	plastid	77.9	68.65
Bra008779.1-P	Field mustard	plastid	66.29	64.6
Solyc02g068180.2.1	Tomato	plastid	65.92	64.23
CDX69605	Canola	plastid	65.92	64.23
CDY58413	Canola	cytosol, plastid	65.54	63.87
VIT_14s0068g01730.t01	Wine grape	plastid	66.67	62.68
KRG94568	Soybean	mitochondrion	60.3	61.69
AT5G14100.1	Thale cress	plastid	64.04	61.51
GSMUA_Achr1P13520_001	Banana	plastid	70.41	60.06
TraesCS3A01G399400.1	Wheat	cytosol	46.44	49.01
TraesCS4A01G414400.1	Wheat	cytosol	26.97	27.38
TraesCS7A01G427700.1	Wheat	cytosol	26.22	26.92
TraesCS5A01G367900.1	Wheat	golgi	24.72	17.32
TraesCS7A01G367700.1	Wheat	plasma membrane	23.22	10.92
TraesCS6A01G183200.1	Wheat	plasma membrane	28.09	8.06
TraesCS5A01G193200.1	Wheat	plasma membrane	26.59	7.51
TraesCS1A01G343200.1	Wheat	mitochondrion	25.84	7.33
TraesCS1A01G343000.1	Wheat	plasma membrane	25.47	7.14
TraesCS5A01G534100.3	Wheat	cytosol	25.47	6.73
TraesCS1A01G342900.2	Wheat	plasma membrane	23.97	6.63

Protein Annotations

EnsemblPlants:TraesCS3A01G399500.1	EnsemblPlantsGene:TraesCS3A01G399500	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
InterPro:IPR003439	InterPro:P-loop_NTPase	PANTHER:PTHR43553	PANTHER:PTHR43553:SF12	PFAM:PF00005	PFscan:PS50893
SEG:seg	SMART:SM00382	SUPFAM:SSF52540	TIGR:cd03225	MapMan:35.1	:

Description

No Description!

Coordinates

chr3A:-:646557693..646560107

Molecular Weight (calculated)

29672.0 Da

IEP (calculated)

9.068

GRAVY (calculated)

-0.136

Length

267 amino acids

Sequence
(BLAST)

001: MLALANVAFP PTVSSSPVKM TRRFSWRCRA ERVSAGYSQL EVRKVSYRPP GTEQNLLNQT SLSLQEKSFG LIFGRSGSGK TTLLQLLAGL SEPTSGSICI
101: QKYDDSGNPI GLSEVLAPQR VGIVFQFPER YFLSDTILEE VTFGWPRQKA DIPLREQLTL KLQNAINSVG LSAISLDKDP QSLSGGFKRR LALAIQLVQT
201: PDLLLLDEPL AGLDWKARAD VVNLLKDLKK DHTILVVSHD LRELYPLVDR SWRMEMGGVL KEEPLPV

Best Arabidopsis Sequence Match ( AT5G14100.1 )
(BLAST)

001: MAVSTFSSPT PVFGIAEPPA SFSSTAIGWK QPLRFRRTKK PRVISCDYSC IEVRDVCYRP PGTQLNILNG VNFSLREKSF GLIFGKSGSG KTTLLQLLAG
101: LNKPTSGSIC IQGYGDDGQP KADPDLLPTE KVGIVFQFPE RFFVADNVLD EITFGWPRQK GSLQLKEQLT SNLQRAFNWV GLDSIPLDKD PQLLSGGYKR
201: RLALAIQLVQ TPDLLILDEP LAGLDWKARA DVAKLLKHLK KELTLLVVSH DLRELAALVD QSWRMETGGV LVAERPPL

Arabidopsis Description

ABCI11ABC transporter I family member 11, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEF6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.