Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G138200.1 | Wheat | plasma membrane | 92.97 | 94.09 |
| TraesCS4B01G365000.1 | Wheat | plasma membrane | 90.69 | 93.09 |
| HORVU4Hr1G087670.8 | Barley | mitochondrion | 88.02 | 92.6 |
| TraesCS1A01G343000.1 | Wheat | plasma membrane | 82.87 | 87.83 |
| Os08t0398300-01 | Rice | plasma membrane | 75.54 | 79.73 |
| KXG25097 | Sorghum | plasma membrane | 74.75 | 78.81 |
| Zm00001d050259_P002 | Maize | plasma membrane | 74.75 | 76.73 |
| TraesCS5A01G193200.1 | Wheat | plasma membrane | 66.73 | 71.25 |
| CDX94927 | Canola | cytosol | 8.32 | 70.59 |
| KRH54520 | Soybean | plasma membrane, plastid | 52.48 | 65.68 |
| VIT_12s0055g00730.t01 | Wine grape | extracellular | 8.22 | 65.35 |
| VIT_17s0000g05860.t01 | Wine grape | plasma membrane, plastid | 60.99 | 64.91 |
| PGSC0003DMT400083070 | Potato | cytosol | 7.92 | 64.52 |
| KRG88422 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 30.69 | 63.14 |
| Solyc03g113040.2.1 | Tomato | plastid | 58.61 | 62.65 |
| TraesCS7A01G367700.1 | Wheat | plasma membrane | 34.95 | 62.15 |
| Solyc06g070920.2.1 | Tomato | extracellular, plasma membrane | 39.11 | 61.91 |
| KRH63384 | Soybean | plasma membrane | 44.06 | 61.13 |
| CDY02120 | Canola | cytosol, nucleus, plasma membrane | 39.8 | 61.0 |
| Bra018114.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 37.82 | 60.73 |
| CDY31786 | Canola | cytosol, nucleus, plasma membrane | 39.41 | 60.3 |
| Solyc03g113060.2.1 | Tomato | extracellular | 55.74 | 59.64 |
| AT3G47790.1 | Thale cress | plasma membrane | 53.07 | 59.49 |
| Bra018113.1-P | Field mustard | plasma membrane | 55.45 | 59.45 |
| CDY36930 | Canola | plasma membrane | 55.25 | 59.24 |
| AT3G47780.1 | Thale cress | plasma membrane | 54.65 | 59.04 |
| CDY24156 | Canola | plasma membrane | 54.95 | 58.92 |
| KRH56933 | Soybean | plasma membrane, plastid | 55.35 | 58.9 |
| CDX68441 | Canola | plasma membrane | 54.85 | 58.81 |
| CDX83025 | Canola | plasma membrane | 54.85 | 58.81 |
| Bra033785.1-P | Field mustard | plasma membrane | 54.65 | 58.6 |
| KRH03450 | Soybean | plasma membrane, plastid | 54.75 | 57.97 |
| Bra019513.1-P | Field mustard | plasma membrane | 50.69 | 57.33 |
| CDY36932 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 50.1 | 57.11 |
| CDX68440 | Canola | cytosol, mitochondrion | 7.82 | 56.83 |
| CDY24158 | Canola | plasma membrane | 51.88 | 56.59 |
| VIT_07s0095g00600.t01 | Wine grape | extracellular | 3.86 | 56.52 |
| CDY21797 | Canola | plasma membrane | 50.49 | 56.42 |
| Bra018115.1-P | Field mustard | plasma membrane | 51.58 | 56.26 |
| AT3G47750.1 | Thale cress | mitochondrion, plasma membrane | 52.08 | 56.14 |
| CDX77421 | Canola | plasma membrane | 51.78 | 55.94 |
| CDY23043 | Canola | cytosol, mitochondrion | 28.22 | 55.66 |
| AT5G61700.1 | Thale cress | plasma membrane | 50.49 | 55.62 |
| Bra015049.1-P | Field mustard | plasma membrane | 49.01 | 55.43 |
| CDY39546 | Canola | plasma membrane | 51.29 | 55.4 |
| AT3G47760.3 | Thale cress | plasma membrane | 51.29 | 55.34 |
| AT3G47770.2 | Thale cress | endoplasmic reticulum, golgi, plasma membrane, plastid | 50.69 | 55.29 |
| AT3G47740.1 | Thale cress | plasma membrane | 50.99 | 55.26 |
| Solyc06g070950.1.1 | Tomato | plasma membrane | 48.71 | 55.22 |
| CDY02114 | Canola | plasma membrane | 48.42 | 55.13 |
| CDX77874 | Canola | plasma membrane | 45.25 | 55.13 |
| TraesCS1A01G343200.1 | Wheat | mitochondrion | 51.29 | 55.05 |
| PGSC0003DMT400083071 | Potato | plasma membrane | 50.89 | 54.97 |
| AT5G61740.1 | Thale cress | plasma membrane | 49.41 | 54.9 |
| CDY62599 | Canola | plasma membrane | 47.23 | 54.89 |
| CDY23039 | Canola | plasma membrane | 47.92 | 54.5 |
| GSMUA_Achr7P23890_001 | Banana | plasma membrane | 62.67 | 54.1 |
| CDY36931 | Canola | plastid | 49.8 | 54.03 |
| CDY24157 | Canola | plastid | 50.3 | 53.42 |
| CDY23798 | Canola | nucleus, peroxisome, plasma membrane | 20.0 | 52.6 |
| Bra012931.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 30.69 | 52.36 |
| Bra033786.1-P | Field mustard | cytosol, mitochondrion, nucleus | 15.05 | 51.01 |
| Bra012927.1-P | Field mustard | cytosol | 30.69 | 50.41 |
| GSMUA_Achr3P20510_001 | Banana | plasma membrane | 58.42 | 50.3 |
| TraesCS6A01G183200.1 | Wheat | plasma membrane | 46.24 | 50.16 |
| CDX68438 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 19.8 | 46.95 |
| VIT_18s0041g02240.t01 | Wine grape | plasma membrane | 34.06 | 46.74 |
| Solyc06g070930.2.1 | Tomato | plastid | 11.19 | 41.24 |
| CDX68439 | Canola | nucleus | 6.44 | 41.14 |
| TraesCS3A01G399500.1 | Wheat | plastid | 6.73 | 25.47 |
| TraesCS1A01G342900.2 | Wheat | plasma membrane | 22.48 | 23.5 |
| TraesCS7A01G427700.1 | Wheat | cytosol | 5.74 | 22.31 |
| TraesCS4A01G414400.1 | Wheat | cytosol | 5.74 | 22.05 |
| TraesCS3A01G399400.1 | Wheat | cytosol | 4.46 | 17.79 |
| TraesCS5A01G367900.1 | Wheat | golgi | 6.63 | 17.59 |
Protein Annotations
| MapMan:24.1.3.2.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCA | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PFAM:PF12698 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19229 | PANTHER:PTHR19229:SF141 | SMART:SM00382 |
| SUPFAM:SSF52540 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5A01G534100 | EnsemblPlants:TraesCS5A01G534100.3 | TIGR:cd03263 | SEG:seg |
Description
No Description!
Coordinates
chr5A:-:691436619..691441801
Molecular Weight (calculated)
111709.0 Da
IEP (calculated)
8.180
GRAVY (calculated)
0.057
Length
1010 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAPTWVVSNL ASQTIADDFS SYNHTWWSRV GGREAEPKVE EDDQEQLSFV FSSESSIPAM DGSRGPAGFA TQANALLRKN LCFQKRNVKT NVCITVFPTL
0101: LCVLLLVMQG VINREIGKPE YRCGCACVDT AADGSCRRTE CGVQYSTQDQ VATCPVPSPP RWPAVLQLPP PESRAVGTAS QPLDGLPSPA CRDTRSCPAA
0201: FLVTGSNRSL AQSLSGQLFP ALTSPLNFTD YLHTLSKIVP GSEVPASFRQ FLEPAFTPGN TLYIVQPRCR SNFSQTVSVD AGPKPLKLNV DCIQGLSLWR
0301: ESASVINDEL FKGYRQQRES GGGKANEFAA GYDFLSTNTD SLDISIWFNS TYNNNTGVFE MALLRVPRLV NMVSNAYIKF LRGSGAEMLL EYVKDMPKVG
0401: SELKLDLSSL LGALFFTWII ELLFPVILTY LVYEKQQKLK IMMKMHGLKA GPYWMITYTY FFALSALYMI LFVTFGSLIG LGFFTTNNYS LQIVFYFIYI
0501: NLQIALAFFA ASFFSSVKIA TVVGYIYVFG SGLLGAFLLR FFIQDNSFPK GWIVVMEIIP GFSLYRGLYE LGQYAFIGTA MGTDGMTWTS LSDPVNGMRT
0601: VLIIMVVEWA ILLPLAFYLD QVSLLGGGLR KRLLILLKCF KKRAASLRMY SFGRIGSKVI VEMENPDATQ EREAVEQLLL EPNANYAIIC DNLKKVYHGR
0701: DGNPDKLAVR GLSLALPKGQ CFGMLGPNGA GKTSFISMMI GLVPPTSGTA YVHGMDIRTD MNEIYTNMGV CPQHDLLWET LTGKEHLLFY GRLKNLKGAE
0801: LLKATDDSLK SVNLFRGGVG HKQVGKYSGG MKRRLSVAIS LIGDPKVVFM DEPSTGLDPA SRNSLWSVVK EAKKNRAIIL TTHSMEEAEV LCDRLSIFVD
0901: GGFQCIGNPK ELKARYGGTY VLTITTSPEH EQEVEQLVHR LSPNANRIYH ISGTQKFELP KQEVKIASVF HEVESAKCRF SIHAWGLADT TLEDVFIKVA
1001: QGAQAFSVNA
0101: LCVLLLVMQG VINREIGKPE YRCGCACVDT AADGSCRRTE CGVQYSTQDQ VATCPVPSPP RWPAVLQLPP PESRAVGTAS QPLDGLPSPA CRDTRSCPAA
0201: FLVTGSNRSL AQSLSGQLFP ALTSPLNFTD YLHTLSKIVP GSEVPASFRQ FLEPAFTPGN TLYIVQPRCR SNFSQTVSVD AGPKPLKLNV DCIQGLSLWR
0301: ESASVINDEL FKGYRQQRES GGGKANEFAA GYDFLSTNTD SLDISIWFNS TYNNNTGVFE MALLRVPRLV NMVSNAYIKF LRGSGAEMLL EYVKDMPKVG
0401: SELKLDLSSL LGALFFTWII ELLFPVILTY LVYEKQQKLK IMMKMHGLKA GPYWMITYTY FFALSALYMI LFVTFGSLIG LGFFTTNNYS LQIVFYFIYI
0501: NLQIALAFFA ASFFSSVKIA TVVGYIYVFG SGLLGAFLLR FFIQDNSFPK GWIVVMEIIP GFSLYRGLYE LGQYAFIGTA MGTDGMTWTS LSDPVNGMRT
0601: VLIIMVVEWA ILLPLAFYLD QVSLLGGGLR KRLLILLKCF KKRAASLRMY SFGRIGSKVI VEMENPDATQ EREAVEQLLL EPNANYAIIC DNLKKVYHGR
0701: DGNPDKLAVR GLSLALPKGQ CFGMLGPNGA GKTSFISMMI GLVPPTSGTA YVHGMDIRTD MNEIYTNMGV CPQHDLLWET LTGKEHLLFY GRLKNLKGAE
0801: LLKATDDSLK SVNLFRGGVG HKQVGKYSGG MKRRLSVAIS LIGDPKVVFM DEPSTGLDPA SRNSLWSVVK EAKKNRAIIL TTHSMEEAEV LCDRLSIFVD
0901: GGFQCIGNPK ELKARYGGTY VLTITTSPEH EQEVEQLVHR LSPNANRIYH ISGTQKFELP KQEVKIASVF HEVESAKCRF SIHAWGLADT TLEDVFIKVA
1001: QGAQAFSVNA
001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS
Arabidopsis Description
ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.