Factsheet for Os08t0398300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
plasma membrane 4
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25097	Sorghum	plasma membrane	82.97	82.88
TraesCS1A01G343000.1	Wheat	plasma membrane	81.5	81.85
TraesCS1D01G345200.1	Wheat	plasma membrane	81.4	81.83
HORVU1Hr1G075620.5	Barley	plasma membrane	80.98	81.24
TraesCS1B01G356200.1	Wheat	plasma membrane	80.56	80.99
Zm00001d050259_P002	Maize	plasma membrane	82.97	80.69
HORVU4Hr1G087670.8	Barley	mitochondrion	77.12	76.88
TraesCS4B01G365000.1	Wheat	plasma membrane	78.89	76.73
TraesCSU01G138200.1	Wheat	plasma membrane	78.89	75.65
TraesCS5A01G534100.3	Wheat	cytosol	79.73	75.54
TraesCS3D01G368700.2	Wheat	plasma membrane	74.4	73.55
CDX94927	Canola	cytosol	8.88	71.43
KRH54520	Soybean	plasma membrane, plastid	55.8	66.17
VIT_17s0000g05860.t01	Wine grape	plasma membrane, plastid	64.79	65.33
Os02t0107900-00	Rice	cytosol	16.41	65.15
VIT_12s0055g00730.t01	Wine grape	extracellular	8.57	64.57
Solyc03g113040.2.1	Tomato	plastid	63.11	63.92
PGSC0003DMT400083070	Potato	cytosol	8.25	63.71
CDY02120	Canola	cytosol, nucleus, plasma membrane	43.36	62.97
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	32.18	62.73
CDY31786	Canola	cytosol, nucleus, plasma membrane	42.84	62.12
Solyc06g070920.2.1	Tomato	extracellular, plasma membrane	41.17	61.76
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.02	60.89
VIT_07s0095g00600.t01	Wine grape	extracellular	4.39	60.87
Solyc03g113060.2.1	Tomato	extracellular	59.98	60.81
KRH63384	Soybean	plasma membrane	46.19	60.71
AT3G47780.1	Thale cress	plasma membrane	58.52	59.89
CDX83025	Canola	plasma membrane	58.83	59.77
Bra033785.1-P	Field mustard	plasma membrane	58.83	59.77
KRH56933	Soybean	plasma membrane, plastid	58.93	59.43
CDX68441	Canola	plasma membrane	58.41	59.34
AT3G47790.1	Thale cress	plasma membrane	55.8	59.27
CDY24156	Canola	plasma membrane	58.31	59.24
Os09t0360900-01	Rice	plasma membrane	28.63	59.05
CDY36930	Canola	plasma membrane	58.1	59.02
Bra018113.1-P	Field mustard	plasma membrane	58.1	59.02
Bra019513.1-P	Field mustard	plasma membrane	54.75	58.68
KRH03450	Soybean	plasma membrane, plastid	57.89	58.07
CDY36932	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	53.5	57.79
CDY21797	Canola	plasma membrane	54.55	57.74
CDX77874	Canola	plasma membrane	49.32	56.94
CDY24158	Canola	plasma membrane	55.07	56.91
CDX68440	Canola	cytosol, mitochondrion	8.25	56.83
CDY23043	Canola	cytosol, mitochondrion	30.3	56.64
Bra018115.1-P	Field mustard	plasma membrane	54.75	56.59
GSMUA_Achr7P23890_001	Banana	plasma membrane	69.17	56.58
AT5G61700.1	Thale cress	plasma membrane	53.92	56.27
CDY62599	Canola	plasma membrane	50.99	56.16
CDX77421	Canola	plasma membrane	54.75	56.04
AT5G61740.1	Thale cress	plasma membrane	53.08	55.89
AT3G47740.1	Thale cress	plasma membrane	54.34	55.79
CDY39546	Canola	plasma membrane	54.34	55.62
Bra015049.1-P	Field mustard	plasma membrane	51.83	55.54
Os06t0589300-01	Rice	plasma membrane	55.07	55.53
Os08t0398350-00	Rice	cytosol	48.69	55.41
CDY02114	Canola	plasma membrane	51.2	55.24
AT3G47760.3	Thale cress	plasma membrane	54.02	55.23
Solyc06g070950.1.1	Tomato	plasma membrane	51.41	55.22
AT3G47770.2	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	53.4	55.18
AT3G47750.1	Thale cress	mitochondrion, plasma membrane	53.81	54.96
CDY23039	Canola	plasma membrane	50.57	54.5
CDY36931	Canola	plastid	52.35	53.81
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.23	53.72
CDY24157	Canola	plastid	53.19	53.52
CDY23798	Canola	nucleus, peroxisome, plasma membrane	21.42	53.39
PGSC0003DMT400083071	Potato	plasma membrane	52.14	53.37
GSMUA_Achr3P20510_001	Banana	plasma membrane	64.16	52.34
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	16.09	51.68
Bra012927.1-P	Field mustard	cytosol	32.6	50.73
CDX68438	Canola	endoplasmic reticulum, extracellular, plasma membrane	21.0	47.18
VIT_18s0041g02240.t01	Wine grape	plasma membrane	35.32	45.92
CDX68439	Canola	nucleus	6.79	41.14
Solyc06g070930.2.1	Tomato	plastid	10.24	35.77
Os08t0398000-01	Rice	plasma membrane	24.45	24.17
Os11t0490800-02	Rice	plastid	6.9	22.84
Os03t0670100-01	Rice	plastid	7.73	20.96
Os06t0695800-01	Rice	unclear	7.21	19.94
Os10t0434900-00	Rice	cytosol, mitochondrion	2.51	17.91

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	EntrezGene:4345498	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:BAF23657.1	ProteinID:BAT05320.1	ProteinID:EEE68636.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0043231	GO:GO:0055085	InterPro:IPR003439
EnsemblPlantsGene:Os08g0398300	EnsemblPlants:Os08t0398300-01	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF141	UniProt:Q0J5V8	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0000DD9502	RefSeq:XP_015651056.1	SEG:seg	:	:

Description

ABC TRANSPORTER A FAMILY MEMBER 4ABC transporter-like domain containing protein. (Os08t0398300-01)

Coordinates

chr8:+:18993292..18998956

Molecular Weight (calculated)

105835.0 Da

IEP (calculated)

8.758

GRAVY (calculated)

0.020

Length

957 amino acids

Sequence
(BLAST)

001: MADTSSSSSS RGAAGFATQA NALLRKNLCF QRRNMKTNAC ITVFPVFLCV ILVVLQGVIN HEINKPKYQC GCACVDAAPD GTCRRTECGV EHSTLDQVGS
101: CPIKSPTPWP ALVQVPRPES RAVRIASQPF DGLPDPTCRD TGSCPASVLV TGMNRSLAQS LWGGLFPAVP PSLNFTDYLD AFSKIVAGSD TWTWTTQFIE
201: PVFTPGHSLY VVQPQCSSNL SRTISNKAGP VPIQLNIDCV QGLSLWRESA SQINNELFRG YRQQGGGGGG GKTNEFIAGY DFLNTNNNGL EINIWYNSTY
301: NNNTAYDVIS LLRVPRLVNT ASNAYMKFLK GSGVEMLLEY VKDMPKVGTK PKFDLSSLLG ALFFTWIIEL LFPVILTYLV YEKQQKLKIM MKMHGLKDEP
401: YWMISYSYFF ALSAVYMIVF VVFGSLIGLN FFKTNNYGIQ FVFYFIYINL QIALAFFVAA FFSSVKTATV VGYIYVFGSG LLGAFLLRFF VESTSFPKGW
501: IVVMEIIPGF SLYRGLYELG QYAFSGNAMG TNGMEWTNLR DSENGMRNVL IIMVVEWAIL LPLAFYLDKI SSLGSGARKT PMFFLKRFKN RAVSLRRSFG
601: RQGSKVVVEM DNPDVSQERE VVEQLLLEPN ASQAIICDNL KKVYHGKDGN PDKLAVRGLS LALPKGQCFG MLGPNGAGKT SFISMMIGLI PPTSGTALVH
701: GMDINTDMDS IYTNMGVCPQ HDLLWETLTG KEHLLFYGRL KNLKGAELEK AVDDSLKNVN LFHGGVGNKQ VGKYSGGMKR RLSVAISLIG DPKVVFMDEP
801: STGLDPASRN NLWNVVKEAK KNRAIILTTH SMEEAEVLCD RLGIFVDGGF QCLGNPKELK ARYGGTYVFT MTTSSEHEQE VKQLVQHLSP SANRIYHISG
901: TQKFELPKQE VKIADVFHAV EKAKRQFSIH AWGLVDTTLE DVFIKVAKGA QGVNVIA

Best Arabidopsis Sequence Match ( AT3G47780.1 )
(BLAST)

001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS

Arabidopsis Description

ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.