Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 5
- golgi 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0398300-01 | Rice | plasma membrane | 59.05 | 28.63 |
| Os06t0589300-01 | Rice | plasma membrane | 42.03 | 20.55 |
| Os08t0398350-00 | Rice | cytosol | 32.11 | 17.72 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 6.68 | 8.45 |
| CDX68436 | Canola | plasma membrane | 4.31 | 6.8 |
| Os08t0398000-01 | Rice | plasma membrane | 11.21 | 5.37 |
| Os03t0670100-01 | Rice | plastid | 2.16 | 2.83 |
| Os02t0107900-00 | Rice | cytosol | 1.29 | 2.49 |
| GSMUA_AchrUn_... | Banana | extracellular | 1.72 | 2.37 |
| Os06t0695800-01 | Rice | unclear | 1.72 | 2.31 |
| Os10t0434900-00 | Rice | cytosol, mitochondrion | 0.43 | 1.49 |
| Os11t0490800-02 | Rice | plastid | 0.43 | 0.69 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi, plasma membrane | 0.22 | 0.09 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A0N7KQN2 | InterPro:ABCA | ProteinID:BAT07690.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0042626 | GO:GO:0043231 | GO:GO:0055085 | EnsemblPlantsGene:Os09g0360900 | EnsemblPlants:Os09t0360900-01 |
| PANTHER:PTHR19229 | PANTHER:PTHR19229:SF141 | TMHMM:TMhelix | UniParc:UPI000393A9DF | SEG:seg | : |
Description
ABC TRANSPORTER A FAMILY MEMBER 6Conserved hypothetical protein. (Os09t0360900-01)
Coordinates
chr9:+:11779735..11785476
Molecular Weight (calculated)
52925.6 Da
IEP (calculated)
5.653
GRAVY (calculated)
0.255
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: FLSLWLRVQR RNLKTNVGIT VFPILICVLL VVLQNVINGE LDKPKYQCGC ECTESDLDGT CLRKECGIQH STLEQVWSCE VPSPPRWPAL IQVPWPGFRA
101: VGTASQPFDD LPNPLCRGDG SCPVTLLVTG ENQTLAERVS GRVFPALYPL PNVTDYLMPP PFSPSQVTDY LDILSRIVVG SDTQPWYTQL LEPAFSSGKT
201: LHLLQPRCMP FMFGTIPYNA GGVPLHIDIQ CIEVQMLWRE SASVINYELF KGYVQRGGET NEFVAGYDFL NTTGYDLNIN VWYNSTYNDN TAYSFIAALR
301: VPRLVNAISN AYLKFIRGSG VDMLLEYVKE MPKVGTRFRL DLSSLLSVLF FTWIVELLFP VMLTYLVYEK EQKLKIMMKM HGLKDGPYWL ISYAYFFALS
401: VIYMTFFVIF GSLIGNFLPI YFHEDCTCIF CGIFLFICQD SHCDWIHLCI WLWLARGISF SFLC
101: VGTASQPFDD LPNPLCRGDG SCPVTLLVTG ENQTLAERVS GRVFPALYPL PNVTDYLMPP PFSPSQVTDY LDILSRIVVG SDTQPWYTQL LEPAFSSGKT
201: LHLLQPRCMP FMFGTIPYNA GGVPLHIDIQ CIEVQMLWRE SASVINYELF KGYVQRGGET NEFVAGYDFL NTTGYDLNIN VWYNSTYNDN TAYSFIAALR
301: VPRLVNAISN AYLKFIRGSG VDMLLEYVKE MPKVGTRFRL DLSSLLSVLF FTWIVELLFP VMLTYLVYEK EQKLKIMMKM HGLKDGPYWL ISYAYFFALS
401: VIYMTFFVIF GSLIGNFLPI YFHEDCTCIF CGIFLFICQD SHCDWIHLCI WLWLARGISF SFLC
001: MADPGPASFS TRANALLRKN LTYQKRNLWS NIRLIMIPFY LCILLVIIQI LFDTQVNNSA DNRCGCECIE RNRAGKCQRE LCGLEHSKPD QAFFCSIPRP
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS
101: PLWPPLLQIP RPESRDVRGL RDDSCRRTGS CPVTILFTGN NRSLGTTVSE NLFTSSVSAN ASEILRTLAN NVLGTTVEAD FTNYLDPGIA SNLSIYNIQP
201: RCILNATFPF SFEQPPLKFE KELRCVQGSN LWTNTSKEVN DKIFKGYKKG NPEGKINEIA AAYDLLNTDR NNFNVHIWYN STYKDDAGNR LIKLIRVPRS
301: VNLVSNAYLQ FLQGPGTRML FEYVKEMPKP ETSLRLDIAS LIGPLFFTWV ILLLFPVILS SLVYEKQQHL RIIMKMHGLG DGPYWMISYA YFLTISVLYV
401: ICLMIFGSAI GLKFFRLNSY SIQFVFYFLY LNLQIALAFL VSSVFSKVKT STVASYIYVF GSGLLGLFLL NFLIEDSSFP RGWIIVMELY PGFSLYRGLY
501: ELAQFAFRGN LRGEDGMKWK DFGDSAMDDV FYIIVVEWFL ALIAAYYIDK ISSSGRNPLF FLQNPFKKSP SLRRPSLQRQ GSKVSVDMEK PDVTHESKKV
601: ERLMLESSTS HAIVCDNLKK VYPGRDGNPP KLAVRGLSLA VPSGECFGML GPNGAGKTSF INMMTGLLKP TSGTALVQGL DICNDMDRVY TSMGVCPQHD
701: LLWETLTGRE HLLFYGRLKN LKGADLNQAV EESLKSVNLF HGGVADKPAG KYSGGMKRRL SVAISLIGNP KVVYMDEPST GLDPASRKNL WTVIKRAKQN
801: TAIILTTHSM EEAEFLCDRL GIFVDGGLQC IGNPKELKGR YGGSYVFTMT TSSEHEQNVE KLIKDVSPNA KKIYHIAGTQ KFELPKEEVR ISEVFQAVEK
901: AKSNFTVFAW GLADTTLEDV FIKVVRNGQA FNVFS
Arabidopsis Description
ABCA7ABC transporter A family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STT5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.